RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 FDCSPQ8NFU4 85 aa17.06■□□□□ 0.32
EXOSC3-202ENST00000396521 OR2L2Q8NH16 312 aa17.06■□□□□ 0.32
EXOSC3-202ENST00000396521 CLIP3Q96DZ5 547 aa17.06■□□□□ 0.32
EXOSC3-202ENST00000396521 LINC00615Q96LM1 132 aaPredicted RBP17.06■□□□□ 0.32
EXOSC3-202ENST00000396521 VAT1Q99536 393 aa17.06■□□□□ 0.32
EXOSC3-202ENST00000396521 CCM2Q9BSQ5 444 aa17.06■□□□□ 0.32
EXOSC3-202ENST00000396521 SERTAD3Q9UJW9 196 aa17.06■□□□□ 0.32
EXOSC3-202ENST00000396521 OR6C74A6NCV1 312 aa17.05■□□□□ 0.32
EXOSC3-202ENST00000396521 ALPPP05187 535 aa17.05■□□□□ 0.32
EXOSC3-202ENST00000396521 HNRNPH3P31942 346 aaKnown RBP17.05■□□□□ 0.32
EXOSC3-202ENST00000396521 RORAP35398 523 aa17.05■□□□□ 0.32
EXOSC3-202ENST00000396521 WNT3AP56704 352 aa17.05■□□□□ 0.32
EXOSC3-202ENST00000396521 TFDP2Q14188 446 aa17.05■□□□□ 0.32
EXOSC3-202ENST00000396521 NFE2L1Q14494 772 aa17.05■□□□□ 0.32
EXOSC3-202ENST00000396521 KRT33BQ14525 404 aa17.05■□□□□ 0.32
EXOSC3-202ENST00000396521 GPR19Q15760 415 aa17.05■□□□□ 0.32
EXOSC3-202ENST00000396521 SLC18A3Q16572 532 aa17.05■□□□□ 0.32
EXOSC3-202ENST00000396521 EIF2S3LQ2VIR3 472 aaKnown RBP17.05■□□□□ 0.32
EXOSC3-202ENST00000396521 SLC6A19Q695T7 634 aa17.05■□□□□ 0.32
EXOSC3-202ENST00000396521 RAB43Q86YS6 212 aa17.05■□□□□ 0.32
EXOSC3-202ENST00000396521 IQCKQ8N0W5 287 aa17.05■□□□□ 0.32
EXOSC3-202ENST00000396521 Q8NA96 180 aa17.05■□□□□ 0.32
EXOSC3-202ENST00000396521 SLC38A9Q8NBW4 561 aa17.05■□□□□ 0.32
EXOSC3-202ENST00000396521 TFB1MQ8WVM0 346 aaKnown RBP17.05■□□□□ 0.32
EXOSC3-202ENST00000396521 SGSM3Q96HU1 749 aa17.05■□□□□ 0.32
EXOSC3-202ENST00000396521 C12orf66Q96MD2 445 aa17.05■□□□□ 0.32
EXOSC3-202ENST00000396521 INSM2Q96T92 566 aaPredicted RBP17.05■□□□□ 0.32
EXOSC3-202ENST00000396521 DDX56Q9NY93 547 aaKnown RBP17.05■□□□□ 0.32
EXOSC3-202ENST00000396521 ZNF106Q9H2Y7 1883 aaKnown RBP17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 C3orf70A6NLC5 250 aaPredicted RBP17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 OR2AG2A6NM03 316 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 C9J4A7 227 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 UGT1A9O60656 530 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 TMEM253P0C7T8 217 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 UGT1A6P19224 532 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 CYP2A7P20853 494 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 AGXTP21549 392 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 CDH3P22223 829 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 UGT1A1P22309 533 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 UGT1A4P22310 534 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 PTPN3P26045 913 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 UBASH3AP57075 661 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 GSE1Q14687 1217 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 MESDQ14696 234 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 PRKD1Q15139 912 aaPredicted RBP17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 BCL7AQ4VC05 210 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 SIRPB2Q5JXA9 342 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 FNBP1LQ5T0N5 605 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 VWA5B1Q5TIE3 1220 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 FAM151BQ6UXP7 276 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 CERS6Q6ZMG9 384 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 FAM83HQ6ZRV2 1179 aaPredicted RBP17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 GLT6D1Q7Z4J2 308 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 CPNE8Q86YQ8 564 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 PRR7Q8TB68 274 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 ZNF398Q8TD17 642 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 HEXDCQ8WVB3 486 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 CPLX3Q8WVH0 158 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 FER1L6-AS2Q96M78 137 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 ACTR5Q9H9F9 607 aaPredicted RBP17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 UGT1A7Q9HAW7 530 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 UGT1A10Q9HAW8 530 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 UGT1A8Q9HAW9 530 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 POMT2Q9UKY4 750 aa17.04■□□□□ 0.32
EXOSC3-202ENST00000396521 ZNF185O15231 689 aa17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 STX7O15400 261 aaKnown RBP17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 IPO13O94829 963 aaKnown RBP17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 RALBP11234 206 aa17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 AKT1P31749 480 aa17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 SLC1A1P43005 524 aa17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 PREPP48147 710 aa17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 KPNA2P52292 529 aaKnown RBP17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 FANCCQ00597 558 aa17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 MPP3Q13368 585 aa17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 IQCB1Q15051 598 aa17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 NCF4Q15080 339 aa17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 SLC1A5Q15758 541 aa17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 HIST2H2BCQ6DN03 193 aa17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 KDELC1Q6UW63 502 aa17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 IGFL3Q6UXB1 125 aa17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 RFX6Q8HWS3 928 aa17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 RHOT2Q8IXI1 618 aa17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 RBMXL3Q8N7X1 1067 aaKnown RBP17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 ACVR1CQ8NER5 493 aa17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 TM9SF4Q92544 642 aa17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 FCRL5Q96RD9 977 aa17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 C19orf43Q9BQ61 176 aa17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 NUDT9Q9BW91 350 aa17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 SLC7A5P2Q9GIP4 190 aa17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 WWP1Q9H0M0 922 aa17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 PCMTD2Q9NV79 361 aa17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 UBP1Q9NZI7 540 aa17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 MAP10Q9P2G4 905 aa17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 SLC5A6Q9Y289 635 aa17.03■□□□□ 0.32
EXOSC3-202ENST00000396521 HIVEP3Q5T1R4 2406 aa17.02■□□□□ 0.32
EXOSC3-202ENST00000396521 SLC9B1P1A6NJY1 282 aa17.02■□□□□ 0.32
EXOSC3-202ENST00000396521 C2orf81A6NN90 581 aa17.02■□□□□ 0.32
EXOSC3-202ENST00000396521 ZRANB3Q5FWF4 1079 aa17.02■□□□□ 0.32
EXOSC3-202ENST00000396521 SYTL1Q8IYJ3 562 aa17.02■□□□□ 0.32
EXOSC3-202ENST00000396521 ZBTB2Q8N680 514 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms