RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 HLTFQ14527 1009 aaKnown RBP eCLIP9.92□□□□□ -0.829e-6■□□□□ 9.4
THUMPD1-202ENST00000396083 DUPD1Q68J44 220 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 IQCKQ8N0W5 287 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 ARL10Q8N8L6 244 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 FBXO36Q8NEA4 188 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 CCDC74AQ96AQ1 378 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 RANBP9Q96S59 729 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 CDC6Q99741 560 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 SAYSD1Q9NPB0 183 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 IARS2Q9NSE4 1012 aaKnown RBP9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 ZC3H7BQ9UGR2 993 aaKnown RBP9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 BOD1L1Q8NFC6 3051 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 SEC16AO15027 2179 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 CCDC189A1A4V9 331 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 PPM1DO15297 605 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 NDUFS3O75489 264 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 FAM107AO95990 144 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 BRAFP15056 766 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 MDH1P40925 334 aaKnown RBP9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 MAGEA3P43357 314 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 ACADVLP49748 655 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 ARL4CP56559 192 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 MPP1Q00013 466 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 HSPA14Q0VDF9 509 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 THOC5Q13769 683 aaKnown RBP9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 CRYMQ14894 314 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 GPR33Q49SQ1 333 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 NEPROQ6NW34 567 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 SYDE1Q6ZW31 735 aaPredicted RBP9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 NLRP9Q7RTR0 991 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 ARL14Q8N4G2 192 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 LKAAEAR1Q8TD35 194 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 SKA2Q8WVK7 121 aaPredicted RBP9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 MRRFQ96E11 262 aaKnown RBP9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 CCDC3Q9BQI4 270 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 SMOXQ9NWM0 555 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 CSNK1G3Q9Y6M4 447 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 RNF215Q9Y6U7 377 aa9.92□□□□□ -0.82
THUMPD1-202ENST00000396083 FAM187AA6NFU0 413 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 AGAP14A8MT82 685 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 MLNP12872 115 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 SSTR1P30872 391 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 ARCN1P48444 511 aaKnown RBP9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 OR1D5P58170 312 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 CLCA4Q14CN2 919 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 NR0B2Q15466 257 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 SNCBQ16143 134 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 HOOK3Q86VS8 718 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 IFT20Q8IY31 132 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 CFAP61Q8NHU2 1237 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 MAPK15Q8TD08 544 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 ELMO1Q92556 727 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 SCARF2Q96GP6 870 aaPredicted RBP9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 EBNA1BP2Q99848 306 aaKnown RBP9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 SCNM1Q9BWG6 230 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 RAB17Q9H0T7 212 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 WDR70Q9NW82 654 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 KLHL3Q9UH77 587 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 NBEAQ8NFP9 2946 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 TRBV5-4A0A0C4DH59 114 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 FAM237BA0A1B0GVD1 139 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 EME2A4GXA9 379 aaPredicted RBP9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 KRT87PA6NCN2 255 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 RHPN2P1A8MT19 583 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 AP3B1O00203 1094 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 CKMT1AP12532 417 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 F3P13726 295 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 TYRP1P17643 537 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 SAT1P21673 171 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 IDSP22304 550 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 NSG1P42857 185 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 SLC1A2P43004 574 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 HHEXQ03014 270 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 ACVR1Q04771 509 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 PRKG2Q13237 762 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 LAMB3Q13751 1172 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 LRP8Q14114 963 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 GLE1Q53GS7 698 aaKnown RBP9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 SNAP47Q5SQN1 464 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 UBAP2Q5T6F2 1119 aaKnown RBP9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 PTRHD1Q6GMV3 140 aaKnown RBP9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 C6orf89Q6UWU4 347 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 UNC5AQ6ZN44 842 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 CCDC121Q6ZUS5 278 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 CENPUQ71F23 418 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 TMEM135Q86UB9 458 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 KCNMB4Q86W47 210 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 TRIM48Q8IWZ4 208 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 ULK4Q96C45 1275 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 NDNQ99608 321 aa9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 ACTR5Q9H9F9 607 aaPredicted RBP9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 APOBEC2Q9Y235 224 aaKnown RBP9.91□□□□□ -0.82
THUMPD1-202ENST00000396083 ATMQ13315 3056 aa9.9□□□□□ -0.82
THUMPD1-202ENST00000396083 SRRM3A6NNA2 597 aaPredicted RBP9.9□□□□□ -0.82
THUMPD1-202ENST00000396083 TPP1O14773 563 aa9.9□□□□□ -0.82
THUMPD1-202ENST00000396083 NIPSNAP2O75323 286 aa9.9□□□□□ -0.82
THUMPD1-202ENST00000396083 RFPL3O75679 317 aa9.9□□□□□ -0.82
THUMPD1-202ENST00000396083 FAM153BP0C7A2 387 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms