RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 PEBP4Q96S96 227 aa13.27□□□□□ -0.29
VCPKMT-201ENST00000395859 PCDHB18PQ96TA0 734 aa13.27□□□□□ -0.29
VCPKMT-201ENST00000395859 SELENOOQ9BVL4 669 aa13.27□□□□□ -0.29
VCPKMT-201ENST00000395859 TDRD1Q9BXT4 1180 aaKnown RBP13.27□□□□□ -0.29
VCPKMT-201ENST00000395859 TMPRSS11EQ9UL52 423 aa13.27□□□□□ -0.29
VCPKMT-201ENST00000395859 SLC9B1P1A6NJY1 282 aa13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 ALOX12BO75342 701 aa13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 UNC5CO95185 931 aa13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 FOSL1P15407 271 aa13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 CYP2A7P20853 494 aa13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 AGXTP21549 392 aa13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 MMP13P45452 471 aa13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 IST1P53990 364 aa13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 DCDC1P59894 354 aa13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 LONRF1Q17RB8 773 aa13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 ZNF569Q5MCW4 686 aa13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 PRIMA1Q86XR5 153 aa13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 HRNRQ86YZ3 2850 aaPredicted RBP13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 GPR26Q8NDV2 337 aa13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 SPATA3Q8NHX4 192 aa13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 GLYATL1Q969I3 302 aa13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 LMF1Q96S06 567 aa13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 C17orf62Q9BQA9 187 aa13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 REPIN1Q9BWE0 567 aaKnown RBP13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 VPS16Q9H269 839 aa13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 DHX35Q9H5Z1 703 aaKnown RBP13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 FANCEQ9HB96 536 aa13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 C1GALT1Q9NS00 363 aa13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 SOHLH2Q9NX45 425 aa13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 PKD2L2Q9NZM6 624 aa13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 CWC15Q9P013 229 aaKnown RBP13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 ABI3Q9P2A4 366 aa13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 TRIM10Q9UDY6 481 aa13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 FBXL4Q9UKA2 621 aa13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 POMT2Q9UKY4 750 aa13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 CHKBQ9Y259 395 aa13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 PCDHGB6Q9Y5F9 930 aa13.26□□□□□ -0.29
VCPKMT-201ENST00000395859 C1orf232A0A0U1RR37 186 aa13.25□□□□□ -0.29
VCPKMT-201ENST00000395859 SOCS6O14544 535 aa13.25□□□□□ -0.29
VCPKMT-201ENST00000395859 WISP2O76076 250 aa13.25□□□□□ -0.29
VCPKMT-201ENST00000395859 KLHL18O94889 574 aa13.25□□□□□ -0.29
VCPKMT-201ENST00000395859 HBQ1P09105 142 aa13.25□□□□□ -0.29
VCPKMT-201ENST00000395859 RPL26P61254 145 aaKnown RBP13.25□□□□□ -0.29
VCPKMT-201ENST00000395859 LTBQ06643 244 aa13.25□□□□□ -0.29
VCPKMT-201ENST00000395859 FOXD4Q12950 439 aaPredicted RBP13.25□□□□□ -0.29
VCPKMT-201ENST00000395859 MFAP5Q13361 173 aa13.25□□□□□ -0.29
VCPKMT-201ENST00000395859 CYP2A13Q16696 494 aa13.25□□□□□ -0.29
VCPKMT-201ENST00000395859 CCDC183Q5T5S1 534 aa13.25□□□□□ -0.29
VCPKMT-201ENST00000395859 MARC1Q5VT66 337 aa13.25□□□□□ -0.29
VCPKMT-201ENST00000395859 MLIPQ5VWP3 458 aa13.25□□□□□ -0.29
VCPKMT-201ENST00000395859 PDPK2PQ6A1A2 396 aa13.25□□□□□ -0.29
VCPKMT-201ENST00000395859 RHBDD2Q6NTF9 364 aa13.25□□□□□ -0.29
VCPKMT-201ENST00000395859 MON1BQ7L1V2 547 aa13.25□□□□□ -0.29
VCPKMT-201ENST00000395859 OOSP2Q86WS3 158 aa13.25□□□□□ -0.29
VCPKMT-201ENST00000395859 SNRNP25Q9BV90 132 aaKnown RBP13.25□□□□□ -0.29
VCPKMT-201ENST00000395859 NUP85Q9BW27 656 aa13.25□□□□□ -0.29
VCPKMT-201ENST00000395859 PITPNM3Q9BZ71 974 aa13.25□□□□□ -0.29
VCPKMT-201ENST00000395859 ETNK2Q9NVF9 386 aa13.25□□□□□ -0.29
VCPKMT-201ENST00000395859 ADAM22Q9P0K1 906 aa13.25□□□□□ -0.29
VCPKMT-201ENST00000395859 RPL26L1Q9UNX3 145 aaKnown RBP13.25□□□□□ -0.29
VCPKMT-201ENST00000395859 MXRA5Q9NR99 2828 aa13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 CCDC66A2RUB6 948 aa13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 E7EQ34 232 aa13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 FANCGO15287 622 aa13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 KCNJ13O60928 360 aa13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 MTX2O75431 263 aa13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 FGFR1OPO95684 399 aaKnown RBP13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 CD63P08962 238 aa13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 UCHL3P15374 230 aa13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 MMP11P24347 488 aa13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 HALP42357 657 aa13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 SMSP52788 366 aa13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 C3AR1Q16581 482 aa13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 ANKRD20A8PQ5CZ79 823 aa13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 ERMARDQ5T6L9 678 aa13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 MEX3BQ6ZN04 569 aaKnown RBP13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 FAM83HQ6ZRV2 1179 aaPredicted RBP13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 BBS5Q8N3I7 341 aa13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 TTC30BQ8N4P2 665 aa13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 TRAM1L1Q8N609 369 aa13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 CHDHQ8NE62 594 aaPredicted RBP13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 OR1N1Q8NGS0 311 aa13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 ARRDC2Q8TBH0 407 aa13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 ZFPM2Q8WW38 1151 aa13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 MCEEQ96PE7 176 aa13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 ZSCAN5AQ9BUG6 496 aa13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 STK33Q9BYT3 514 aa13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 LHPPQ9H008 270 aa13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 EPS8L2Q9H6S3 715 aa13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 SLC22A11Q9NSA0 550 aa13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 SLC24A2Q9UI40 661 aa13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 CDYLQ9Y232 598 aa13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 ZNF835Q9Y2P0 537 aa13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 ANK3Q12955 4377 aaKnown RBP13.24□□□□□ -0.29
VCPKMT-201ENST00000395859 OR6C74A6NCV1 312 aa13.23□□□□□ -0.29
VCPKMT-201ENST00000395859 KIAA1324LA8MWY0 1029 aaPredicted RBP13.23□□□□□ -0.29
VCPKMT-201ENST00000395859 DAPK3O43293 454 aa13.23□□□□□ -0.29
VCPKMT-201ENST00000395859 CDK14O94921 469 aa13.23□□□□□ -0.29
VCPKMT-201ENST00000395859 MTHFD1P11586 935 aaKnown RBP13.23□□□□□ -0.29
VCPKMT-201ENST00000395859 ST6GAL1P15907 406 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms