RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 PLEKHG4BQ96PX9 1271 aa6.06□□□□□ -1.44
PTPN20-208ENST00000395727 VPS35Q96QK1 796 aa6.06□□□□□ -1.44
PTPN20-208ENST00000395727 PANX2Q96RD6 677 aa6.06□□□□□ -1.44
PTPN20-208ENST00000395727 HERPUD2Q9BSE4 406 aa6.06□□□□□ -1.44
PTPN20-208ENST00000395727 ZSCAN5AQ9BUG6 496 aa6.06□□□□□ -1.44
PTPN20-208ENST00000395727 RIOK2Q9BVS4 552 aaKnown RBP6.06□□□□□ -1.44
PTPN20-208ENST00000395727 MAK16Q9BXY0 300 aaKnown RBP6.06□□□□□ -1.44
PTPN20-208ENST00000395727 EPB41L1Q9H4G0 881 aa6.06□□□□□ -1.44
PTPN20-208ENST00000395727 FAM83DQ9H4H8 585 aa6.06□□□□□ -1.44
PTPN20-208ENST00000395727 TRABDQ9H4I3 376 aa6.06□□□□□ -1.44
PTPN20-208ENST00000395727 UCK1Q9HA47 277 aa6.06□□□□□ -1.44
PTPN20-208ENST00000395727 GLOD4Q9HC38 313 aa6.06□□□□□ -1.44
PTPN20-208ENST00000395727 SARS2Q9NP81 518 aaKnown RBP6.06□□□□□ -1.44
PTPN20-208ENST00000395727 SPATS2LQ9NUQ6 558 aaKnown RBP6.06□□□□□ -1.44
PTPN20-208ENST00000395727 SIRPGQ9P1W8 387 aa6.06□□□□□ -1.44
PTPN20-208ENST00000395727 RALYQ9UKM9 306 aaKnown RBP6.06□□□□□ -1.44
PTPN20-208ENST00000395727 CNOT6Q9ULM6 557 aaKnown RBP6.06□□□□□ -1.44
PTPN20-208ENST00000395727 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.06□□□□□ -1.44
PTPN20-208ENST00000395727 SF3B6Q9Y3B4 125 aaKnown RBP6.06□□□□□ -1.44
PTPN20-208ENST00000395727 HEY1Q9Y5J3 304 aa6.06□□□□□ -1.44
PTPN20-208ENST00000395727 RNF215Q9Y6U7 377 aa6.06□□□□□ -1.44
PTPN20-208ENST00000395727 DSPP15924 2871 aaKnown RBP6.06□□□□□ -1.44
PTPN20-208ENST00000395727 ZNF106Q9H2Y7 1883 aaKnown RBP6.05□□□□□ -1.44
PTPN20-208ENST00000395727 CFAP47Q6ZTR5 3102 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 hCG_1818297A0A087WSY0 165 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 IGHV1OR21-1A0A087WYE8 117 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 KIR2DS5A0A0G2JLQ3 304 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 A0A0G2JNG1 304 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 LOC285095A0A1B0GVY8 99 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 OR5K4A6NMS3 321 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 FADS2P1A8MWK0 482 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 K7ENP7 123 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 APOC4-APOC2K7ER74 178 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 KIR2DS3K7RE56 304 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 B4GAT1O43505 415 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 SPOPO43791 374 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 VEGFDO43915 354 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 NUAK1O60285 661 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 PPFIA2O75334 1257 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 TNFSF15O95150 251 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 ZRANB2O95218 330 aaKnown RBP eCLIP6.05□□□□□ -1.44
PTPN20-208ENST00000395727 CLDN7O95471 211 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 NDST3O95803 873 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 APOC2P02655 101 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 LIPCP11150 499 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 NAT2P11245 290 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 F3P13726 295 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 COMTP21964 271 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 PTPN3P26045 913 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 AK4P27144 223 aaPredicted RBP6.05□□□□□ -1.44
PTPN20-208ENST00000395727 CTNNA1P35221 906 aaKnown RBP6.05□□□□□ -1.44
PTPN20-208ENST00000395727 HMGCLP35914 325 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 ACTR1BP42025 376 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 MAGEA1P43355 309 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 LIMK2P53671 638 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 ACTR1AP61163 376 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 CCDC173Q0VFZ6 552 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 AP1B1Q10567 949 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 WASHC5Q12768 1159 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 XRCC4Q13426 336 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 KIR2DS5Q14953 304 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 PTPRRQ15256 657 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 ODF2Q5BJF6 829 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 ZNF569Q5MCW4 686 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 ZFYVE27Q5T4F4 411 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 DENND2CQ68D51 928 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 INO80CQ6PI98 192 aaPredicted RBP6.05□□□□□ -1.44
PTPN20-208ENST00000395727 WDR74Q6RFH5 385 aaPredicted RBP6.05□□□□□ -1.44
PTPN20-208ENST00000395727 KDELC1Q6UW63 502 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 SPOCD1Q6ZMY3 1216 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 BBS12Q6ZW61 710 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 PIM3Q86V86 326 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 GALNT13Q8IUC8 556 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 PHYKPLQ8IUZ5 450 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 RCOR2Q8IZ40 523 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 FBXO39Q8N4B4 442 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 TRAM1L1Q8N609 369 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 ADCY4Q8NFM4 1077 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 OR4D9Q8NGE8 314 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 TFB1MQ8WVM0 346 aaKnown RBP6.05□□□□□ -1.44
PTPN20-208ENST00000395727 UBE2Q2Q8WVN8 375 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 SH3KBP1Q96B97 665 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 EID2BQ96D98 161 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 BBC3Q96PG8 261 aaPredicted RBP6.05□□□□□ -1.44
PTPN20-208ENST00000395727 QKIQ96PU8 341 aaKnown RBP eCLIP6.05□□□□□ -1.44
PTPN20-208ENST00000395727 FCRL5Q96RD9 977 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 AGAP2Q99490 1192 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 CMKLR1Q99788 373 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 SLC12A9Q9BXP2 914 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.05□□□□□ -1.44
PTPN20-208ENST00000395727 HACD3Q9P035 362 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 CGGBP1Q9UFW8 167 aaPredicted RBP6.05□□□□□ -1.44
PTPN20-208ENST00000395727 CD84Q9UIB8 345 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 ZNF711Q9Y462 761 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 TTLL3Q9Y4R7 772 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 PCDHGA3Q9Y5H0 932 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 ALG6Q9Y672 507 aa6.05□□□□□ -1.44
PTPN20-208ENST00000395727 CCDC66A2RUB6 948 aa6.04□□□□□ -1.44
PTPN20-208ENST00000395727 KLHL33A6NCF5 533 aa6.04□□□□□ -1.44
PTPN20-208ENST00000395727 GOLGA6CA6NDK9 693 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms