RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 TAF1AQ15573 450 aaPredicted RBP17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 FNBP1LQ5T0N5 605 aa17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 TMTC4Q5T4D3 741 aa17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 PAPD7Q5XG87 772 aaKnown RBP17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 KAZNQ674X7 775 aa17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 CAPRIN2Q6IMN6 1127 aaKnown RBP17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 RANBP10Q6VN20 620 aa17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 BBS12Q6ZW61 710 aa17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 TMEM135Q86UB9 458 aa17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 ZNF501Q96CX3 271 aaPredicted RBP17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 RBM41Q96IZ5 413 aaKnown RBP17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 CCM2Q9BSQ5 444 aa17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 GBA3Q9H227 469 aa17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 KCND1Q9NSA2 647 aa17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 RSPH14Q9UHP6 348 aa17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 FARSAQ9Y285 508 aaKnown RBP17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 EFR3BQ9Y2G0 817 aa17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 HYOU1Q9Y4L1 999 aa17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 PCDHGB7Q9Y5F8 929 aa17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 HEBP2Q9Y5Z4 205 aa17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 USP9XQ93008 2570 aaPredicted RBP17.05■□□□□ 0.32
SNRPA1-202ENST00000394082 C17orf113A0A1B0GUU1 675 aa17.05■□□□□ 0.32
SNRPA1-202ENST00000394082 APOC4-APOC2K7ER74 178 aa17.05■□□□□ 0.32
SNRPA1-202ENST00000394082 SRP72O76094 671 aaKnown RBP17.05■□□□□ 0.32
SNRPA1-202ENST00000394082 APOC2P02655 101 aa17.05■□□□□ 0.32
SNRPA1-202ENST00000394082 RAB40ALP0C0E4 278 aa17.05■□□□□ 0.32
SNRPA1-202ENST00000394082 TNNT1P13805 278 aa17.05■□□□□ 0.32
SNRPA1-202ENST00000394082 NR1D1P20393 614 aa17.05■□□□□ 0.32
SNRPA1-202ENST00000394082 AKT1P31749 480 aa17.05■□□□□ 0.32
SNRPA1-202ENST00000394082 GSDMDP57764 484 aa17.05■□□□□ 0.32
SNRPA1-202ENST00000394082 COPS2P61201 443 aa17.05■□□□□ 0.32
SNRPA1-202ENST00000394082 ITPRIPL1Q6GPH6 555 aa17.05■□□□□ 0.32
SNRPA1-202ENST00000394082 HEXDCQ8WVB3 486 aa17.05■□□□□ 0.32
SNRPA1-202ENST00000394082 C12orf66Q96MD2 445 aa17.05■□□□□ 0.32
SNRPA1-202ENST00000394082 PSMG3-AS1Q96PY0 264 aa17.05■□□□□ 0.32
SNRPA1-202ENST00000394082 FERMT1Q9BQL6 677 aa17.05■□□□□ 0.32
SNRPA1-202ENST00000394082 WWP1Q9H0M0 922 aa17.05■□□□□ 0.32
SNRPA1-202ENST00000394082 AKIRIN1Q9H9L7 192 aaPredicted RBP17.05■□□□□ 0.32
SNRPA1-202ENST00000394082 C1GALT1Q9NS00 363 aa17.05■□□□□ 0.32
SNRPA1-202ENST00000394082 AAR2Q9Y312 384 aaKnown RBP17.05■□□□□ 0.32
SNRPA1-202ENST00000394082 SGTAO43765 313 aa17.04■□□□□ 0.32
SNRPA1-202ENST00000394082 SCRG1O75711 98 aa17.04■□□□□ 0.32
SNRPA1-202ENST00000394082 LCA5LO95447 670 aa17.04■□□□□ 0.32
SNRPA1-202ENST00000394082 KLK3P07288 261 aaPredicted RBP17.04■□□□□ 0.32
SNRPA1-202ENST00000394082 SLC35G4P0C7Q5 338 aa17.04■□□□□ 0.32
SNRPA1-202ENST00000394082 RALBP11234 206 aa17.04■□□□□ 0.32
SNRPA1-202ENST00000394082 ADRA1AP35348 466 aa17.04■□□□□ 0.32
SNRPA1-202ENST00000394082 C11orf63Q6NUN7 778 aa17.04■□□□□ 0.32
SNRPA1-202ENST00000394082 ARMC6Q6NXE6 501 aa17.04■□□□□ 0.32
SNRPA1-202ENST00000394082 HPS6Q86YV9 775 aa17.04■□□□□ 0.32
SNRPA1-202ENST00000394082 TMEM126BQ8IUX1 230 aa17.04■□□□□ 0.32
SNRPA1-202ENST00000394082 ULK4Q96C45 1275 aa17.04■□□□□ 0.32
SNRPA1-202ENST00000394082 PPP1R2P1Q96PQ5 205 aa17.04■□□□□ 0.32
SNRPA1-202ENST00000394082 ASB8Q9H765 288 aa17.04■□□□□ 0.32
SNRPA1-202ENST00000394082 POMT2Q9UKY4 750 aa17.04■□□□□ 0.32
SNRPA1-202ENST00000394082 ARL5AQ9Y689 179 aa17.04■□□□□ 0.32
SNRPA1-202ENST00000394082 OR6C74A6NCV1 312 aa17.03■□□□□ 0.32
SNRPA1-202ENST00000394082 BUD23O43709 281 aaKnown RBP17.03■□□□□ 0.32
SNRPA1-202ENST00000394082 ZNF189O75820 626 aaPredicted RBP17.03■□□□□ 0.32
SNRPA1-202ENST00000394082 AGTP01019 485 aa17.03■□□□□ 0.32
SNRPA1-202ENST00000394082 PDGFAP04085 211 aa17.03■□□□□ 0.32
SNRPA1-202ENST00000394082 PRLHRP49683 370 aa17.03■□□□□ 0.32
SNRPA1-202ENST00000394082 KPNA2P52292 529 aaKnown RBP17.03■□□□□ 0.32
SNRPA1-202ENST00000394082 XIAPP98170 497 aa17.03■□□□□ 0.32
SNRPA1-202ENST00000394082 TBX2Q13207 712 aaPredicted RBP17.03■□□□□ 0.32
SNRPA1-202ENST00000394082 MSLNQ13421 630 aaPredicted RBP17.03■□□□□ 0.32
SNRPA1-202ENST00000394082 FAM199XQ6PEV8 388 aaPredicted RBP17.03■□□□□ 0.32
SNRPA1-202ENST00000394082 CERS6Q6ZMG9 384 aa17.03■□□□□ 0.32
SNRPA1-202ENST00000394082 GALNT11Q8NCW6 608 aa17.03■□□□□ 0.32
SNRPA1-202ENST00000394082 ACVR1CQ8NER5 493 aa17.03■□□□□ 0.32
SNRPA1-202ENST00000394082 OR4K2Q8NGD2 314 aa17.03■□□□□ 0.32
SNRPA1-202ENST00000394082 HM13Q8TCT9 377 aa17.03■□□□□ 0.32
SNRPA1-202ENST00000394082 CPT1BQ92523 772 aa17.03■□□□□ 0.32
SNRPA1-202ENST00000394082 CALR3Q96L12 384 aaKnown RBP17.03■□□□□ 0.32
SNRPA1-202ENST00000394082 GORASP1Q9BQQ3 440 aa17.03■□□□□ 0.32
SNRPA1-202ENST00000394082 TRIM55Q9BYV6 548 aa17.03■□□□□ 0.32
SNRPA1-202ENST00000394082 FANCEQ9HB96 536 aa17.03■□□□□ 0.32
SNRPA1-202ENST00000394082 FEZ2Q9UHY8 353 aaPredicted RBP17.03■□□□□ 0.32
SNRPA1-202ENST00000394082 CFAP20Q9Y6A4 193 aaKnown RBP17.03■□□□□ 0.32
SNRPA1-202ENST00000394082 AKR1B15C9JRZ8 316 aaPredicted RBP17.02■□□□□ 0.32
SNRPA1-202ENST00000394082 CEACAM4O75871 244 aa17.02■□□□□ 0.32
SNRPA1-202ENST00000394082 CRTAMO95727 393 aa17.02■□□□□ 0.32
SNRPA1-202ENST00000394082 RBL1P28749 1068 aa17.02■□□□□ 0.32
SNRPA1-202ENST00000394082 PBLDP30039 288 aaPredicted RBP17.02■□□□□ 0.32
SNRPA1-202ENST00000394082 HADHAP40939 763 aa17.02■□□□□ 0.32
SNRPA1-202ENST00000394082 MAGEA1P43355 309 aa17.02■□□□□ 0.32
SNRPA1-202ENST00000394082 CD151P48509 253 aa17.02■□□□□ 0.32
SNRPA1-202ENST00000394082 PGDP52209 483 aa17.02■□□□□ 0.32
SNRPA1-202ENST00000394082 MLLT10P55197 1068 aa17.02■□□□□ 0.32
SNRPA1-202ENST00000394082 PRKAA1Q13131 559 aa17.02■□□□□ 0.32
SNRPA1-202ENST00000394082 GPS2Q13227 327 aa17.02■□□□□ 0.32
SNRPA1-202ENST00000394082 CCDC50Q8IVM0 306 aa17.02■□□□□ 0.32
SNRPA1-202ENST00000394082 DSELQ8IZU8 1212 aa17.02■□□□□ 0.32
SNRPA1-202ENST00000394082 SLC38A9Q8NBW4 561 aa17.02■□□□□ 0.32
SNRPA1-202ENST00000394082 SPDYE1Q8NFV5 336 aaPredicted RBP17.02■□□□□ 0.32
SNRPA1-202ENST00000394082 ADAMTS17Q8TE56 1095 aa17.02■□□□□ 0.32
SNRPA1-202ENST00000394082 MR1Q95460 341 aa17.02■□□□□ 0.32
SNRPA1-202ENST00000394082 RNF31Q96EP0 1072 aa17.02■□□□□ 0.32
SNRPA1-202ENST00000394082 DCUN1D1Q96GG9 259 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms