RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 KLHL26Q53HC5 615 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 RETSATQ6NUM9 610 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 TATDN1Q6P1N9 297 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 PAMR1Q6UXH9 720 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 LPCAT1Q8NF37 534 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 PPP1R13LQ8WUF5 828 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 ROPN1LQ96C74 230 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 SAMD11Q96NU1 681 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 CEP41Q9BYV8 373 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 ALG2Q9H553 416 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 SLAMF7Q9NQ25 335 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 SCUBE2Q9NQ36 999 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 MCUBQ9NWR8 336 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 PIH1D1Q9NWS0 290 aaKnown RBP7.53□□□□□ -1.2
VTI1A-201ENST00000393077 ERAP1Q9NZ08 941 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 KLHL8Q9P2G9 620 aaPredicted RBP7.53□□□□□ -1.2
VTI1A-201ENST00000393077 NFKBIL1Q9UBC1 381 aaPredicted RBP7.53□□□□□ -1.2
VTI1A-201ENST00000393077 ENOPH1Q9UHY7 261 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 LRFN2Q9ULH4 789 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 COL18A1P39060 1754 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 N4BP2Q86UW6 1770 aaPredicted RBP7.53□□□□□ -1.2
VTI1A-201ENST00000393077 A0A0J9YYE9 177 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 LOC100130705A0A1B0GUX0 176 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 OR6C65A6NJZ3 312 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 INMT-MINDY4F8WBC2 141 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 ERVK-10P10266 1014 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 PROZP22891 400 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 PIK3CBP42338 1070 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 HARS2P49590 506 aaKnown RBP7.53□□□□□ -1.2
VTI1A-201ENST00000393077 MEOX2P50222 304 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 HK3P52790 923 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 NDST1P52848 882 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 ATXN1P54253 815 aaKnown RBP7.53□□□□□ -1.2
VTI1A-201ENST00000393077 ITGA1P56199 1179 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 DCDC1P59894 354 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 LIPEQ05469 1076 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 RIPPLY1Q0D2K3 151 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 MAMLD1Q13495 774 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 PCLAFQ15004 111 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 C6orf132Q5T0Z8 1188 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 CES3Q6UWW8 571 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 ANGPTL8Q6UXH0 198 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 ZNF782Q6ZMW2 699 aaPredicted RBP7.53□□□□□ -1.2
VTI1A-201ENST00000393077 C17orf107Q6ZR85 190 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 ZNF605Q86T29 641 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 COQ8AQ8NI60 647 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 UTP15Q8TED0 518 aaKnown RBP7.53□□□□□ -1.2
VTI1A-201ENST00000393077 SHISA4Q96DD7 197 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 EGLN2Q96KS0 407 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 ADPGKQ9BRR6 497 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 GPR88Q9GZN0 384 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 ARNT2Q9HBZ2 717 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 TMEM8AQ9HCN3 771 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 PDGFCQ9NRA1 345 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 ZNF358Q9NW07 568 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 BBIP1A8MTZ0 92 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 NT5C1B-RDH14C9J2C7 533 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 CABYRO75952 493 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 PRAMEF1O95521 474 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 HNRNPLP14866 589 aaKnown RBP eCLIP7.52□□□□□ -1.212e-7■■□□□ 11.7
VTI1A-201ENST00000393077 TBXAS1P24557 533 aaPredicted RBP7.52□□□□□ -1.21
VTI1A-201ENST00000393077 AKAP5P24588 427 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 DDX6P26196 483 aaKnown RBP eCLIP7.52□□□□□ -1.21
VTI1A-201ENST00000393077 RPL9P32969 192 aaKnown RBP7.52□□□□□ -1.21
VTI1A-201ENST00000393077 IDH2P48735 452 aaKnown RBP7.52□□□□□ -1.21
VTI1A-201ENST00000393077 GDF10P55107 478 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 CRADDP78560 199 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 PURAQ00577 322 aaKnown RBP7.52□□□□□ -1.21
VTI1A-201ENST00000393077 PPP3CAQ08209 521 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 C2orf80Q0P641 193 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 KCNAB2Q13303 367 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 SNRNP35Q16560 246 aaKnown RBP7.52□□□□□ -1.21
VTI1A-201ENST00000393077 AANATQ16613 207 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 OR6B2Q6IFH4 312 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 STRADAQ7RTN6 431 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 MFSD4AQ8N468 514 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 GPR156Q8NFN8 814 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 CMASQ8NFW8 434 aaPredicted RBP7.52□□□□□ -1.21
VTI1A-201ENST00000393077 RPL3LQ92901 407 aaKnown RBP7.52□□□□□ -1.21
VTI1A-201ENST00000393077 MUL1Q969V5 352 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 ELMO3Q96BJ8 720 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 AP2M1Q96CW1 435 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 CPNE1Q99829 537 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 MRIQ9BWK5 157 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 SORBS1Q9BX66 1292 aaKnown RBP7.52□□□□□ -1.21
VTI1A-201ENST00000393077 C2orf40Q9H1Z8 148 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 MUC13Q9H3R2 512 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 IGSF5Q9NSI5 407 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 MED11Q9P086 117 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 AKT3Q9Y243 479 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 NCKAP1Q9Y2A7 1128 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 PCDHA11Q9Y5I1 949 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 DOT1LQ8TEK3 1739 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 TCRBV3S1A0A5B6 114 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 OR5K3A6NET4 321 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 KCNK1O00180 336 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 ARHGAP33O14559 1287 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 CTDSP2O14595 271 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 ACOT8O14734 319 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 PER2O15055 1255 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms