RNA–Protein interactions for RNA: ENST00000390495.1

TRAJ42-201, Transcript of T cell receptor alpha joining 42, humanhuman

APPRIS P1 BASIC

Gene TRAJ42, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ42-201ENST00000390495 HERVK_113P61574 105 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 COG7P83436 770 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 FGL2Q14314 439 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 RBMY1FQ15415 496 aaKnown RBP-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 SLC22A6Q4U2R8 563 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 SPECC1Q5M775 1068 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 HYIQ5T013 277 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 FAM102BQ5T8I3 360 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 MTFR2Q6P444 385 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 PGM2L1Q6PCE3 622 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 DUX4L9Q6RFH8 374 aaPredicted RBP-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 KLHL17Q6TDP4 642 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 LCLAT1Q6UWP7 414 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 BTN2A1Q7KYR7 527 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 GPC2Q8N158 579 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 VPS52Q8N1B4 723 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 PARP16Q8N5Y8 322 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 SCAIQ8N9R8 606 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 GMCL1P1Q8NEA9 526 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 VANGL1Q8TAA9 524 aaPredicted RBP-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 CLEC4CQ8WTT0 213 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 NINJ1Q92982 152 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 SPATA17Q96L03 361 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 CCDC28BQ9BUN5 200 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 TMEM120AQ9BXJ8 343 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 ZBTB26Q9HCK0 441 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 MKS1Q9NXB0 559 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 DUX4Q9UBX2 424 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 RAB21Q9UL25 225 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 DHDHQ9UQ10 334 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 NFE2L3Q9Y4A8 694 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 TNRQ92752 1358 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 FRAS1Q86XX4 4008 aa-1.64□□□□□ -2.67
TRAJ42-201ENST00000390495 A0A1W2PPL8 197 aa-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 A0A1W2PR80 420 aa-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 OR6C76A6NM76 312 aa-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 A8MU76 341 aa-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 F8VVB4 439 aa-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 F8VWA3 439 aa-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 SEC14L5O43304 696 aa-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 XPOTO43592 962 aaKnown RBP-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 IL1AP01583 271 aa-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 HLA-FP30511 346 aa-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 ATICP31939 592 aa-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 CDKN1CP49918 316 aaPredicted RBP-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 CDH11P55287 796 aa-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 IGFBP7Q16270 282 aa-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 ZNF74Q16587 644 aa-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 EIF2S3LQ2VIR3 472 aaKnown RBP-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 USP41Q3LFD5 358 aa-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 ESCO2Q56NI9 601 aa-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 C9orf66Q5T8R8 295 aa-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 CES5AQ6NT32 575 aa-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 BBS12Q6ZW61 710 aa-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 WDR75Q8IWA0 830 aaKnown RBP-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 PRR18Q8N4B5 295 aa-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 DNAJC22Q8N4W6 341 aa-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 ARIH2OSQ8N7S6 290 aa-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 GANCQ8TET4 914 aa-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 C2CD4CQ8TF44 421 aa-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 EXOC4Q96A65 974 aa-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 RIPOR3Q96MK2 946 aa-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 RANBP9Q96S59 729 aa-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 ZNF649Q9BS31 505 aa-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 ITGB1BP2Q9UKP3 347 aa-1.65□□□□□ -2.67
TRAJ42-201ENST00000390495 IGHV3-38A0A0C4DH36 116 aa-1.66□□□□□ -2.68
TRAJ42-201ENST00000390495 CCDC189A1A4V9 331 aa-1.66□□□□□ -2.68
TRAJ42-201ENST00000390495 COQ9O75208 318 aa-1.66□□□□□ -2.68
TRAJ42-201ENST00000390495 CBX6O95503 412 aa-1.66□□□□□ -2.68
TRAJ42-201ENST00000390495 MT-ND1P03886 318 aa-1.66□□□□□ -2.68
TRAJ42-201ENST00000390495 LIPFP07098 398 aa-1.66□□□□□ -2.68
TRAJ42-201ENST00000390495 PCP11498 1178 aaKnown RBP-1.66□□□□□ -2.68
TRAJ42-201ENST00000390495 EEF2P13639 858 aaKnown RBP-1.66□□□□□ -2.68
TRAJ42-201ENST00000390495 LHCGRP22888 699 aa-1.66□□□□□ -2.68
TRAJ42-201ENST00000390495 LMO2P25791 158 aa-1.66□□□□□ -2.68
TRAJ42-201ENST00000390495 PIK3CBP42338 1070 aa-1.66□□□□□ -2.68
TRAJ42-201ENST00000390495 RAD23BP54727 409 aa-1.66□□□□□ -2.68
TRAJ42-201ENST00000390495 NAAAQ02083 359 aa-1.66□□□□□ -2.68
TRAJ42-201ENST00000390495 MAPKAPK3Q16644 382 aa-1.66□□□□□ -2.68
TRAJ42-201ENST00000390495 NOTUMQ6P988 496 aa-1.66□□□□□ -2.68
TRAJ42-201ENST00000390495 NIM1KQ8IY84 436 aa-1.66□□□□□ -2.68
TRAJ42-201ENST00000390495 CEND1Q8N111 149 aa-1.66□□□□□ -2.68
TRAJ42-201ENST00000390495 THAP6Q8TBB0 222 aa-1.66□□□□□ -2.68
TRAJ42-201ENST00000390495 CSGALNACT1Q8TDX6 532 aa-1.66□□□□□ -2.68
TRAJ42-201ENST00000390495 IPCEF1Q8WWN9 437 aaPredicted RBP-1.66□□□□□ -2.68
TRAJ42-201ENST00000390495 CNRIP1Q96F85 164 aaPredicted RBP-1.66□□□□□ -2.68
TRAJ42-201ENST00000390495 SRPK1Q96SB4 655 aaKnown RBP-1.66□□□□□ -2.68
TRAJ42-201ENST00000390495 SPAG8Q99932 426 aaPredicted RBP-1.66□□□□□ -2.68
TRAJ42-201ENST00000390495 TRIM31Q9BZY9 425 aa-1.66□□□□□ -2.68
TRAJ42-201ENST00000390495 UPB1Q9UBR1 384 aa-1.66□□□□□ -2.68
TRAJ42-201ENST00000390495 CA14Q9ULX7 337 aa-1.66□□□□□ -2.68
TRAJ42-201ENST00000390495 NCOR2Q9Y618 2525 aa-1.66□□□□□ -2.68
TRAJ42-201ENST00000390495 CACNA1EQ15878 2313 aa-1.67□□□□□ -2.68
TRAJ42-201ENST00000390495 IGLV4-69A0A075B6H9 119 aa-1.67□□□□□ -2.68
TRAJ42-201ENST00000390495 LOC105369274A0A096LPK9 316 aa-1.67□□□□□ -2.68
TRAJ42-201ENST00000390495 IGKV2-24A0A0C4DH68 120 aa-1.67□□□□□ -2.68
TRAJ42-201ENST00000390495 LOC102723532A0A0G2JNH3 316 aa-1.67□□□□□ -2.68
TRAJ42-201ENST00000390495 TYW5A2RUC4 315 aaKnown RBP-1.67□□□□□ -2.68
TRAJ42-201ENST00000390495 ANKRD66B4E2M5 251 aa-1.67□□□□□ -2.68
TRAJ42-201ENST00000390495 UBXN7O94888 489 aa-1.67□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms