RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 UBP1Q9NZI7 540 aa14.47□□□□□ -0.09
VPS9D1-201ENST00000389386 EHD3Q9NZN3 535 aa14.47□□□□□ -0.09
VPS9D1-201ENST00000389386 EVLQ9UI08 416 aaPredicted RBP14.47□□□□□ -0.09
VPS9D1-201ENST00000389386 TRPM7Q96QT4 1865 aa14.47□□□□□ -0.09
VPS9D1-201ENST00000389386 ZNF638Q14966 1978 aaKnown RBP14.47□□□□□ -0.09
VPS9D1-201ENST00000389386 CAPN5O15484 640 aaPredicted RBP14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 HS6ST1O60243 411 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 FADS2O95864 444 aaKnown RBP14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 GOT2P00505 430 aaKnown RBP14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 LTA4HP09960 611 aaKnown RBP14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 CDH13P55290 713 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 KCNK10P57789 538 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 CTAG1AP78358 180 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 CDH17Q12864 832 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 RAPSNQ13702 412 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 PRAMEF19Q5SWL8 479 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 LAIR1Q6GTX8 287 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 PKN3Q6P5Z2 889 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 CYP20A1Q6UW02 462 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 ZDHHC17Q8IUH5 632 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 FAM86B1Q8N7N1 296 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 TWIST2Q8WVJ9 160 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 L3HYPDHQ96EM0 354 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 PARK7Q99497 189 aaKnown RBP14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 CDADC1Q9BWV3 514 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 DNMT3LQ9UJW3 386 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 C3orf18Q9UK00 162 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 INVSQ9Y283 1065 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 GRIP1Q9Y3R0 1128 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 PPP6CO00743 305 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 BCKDKO14874 412 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 C1RP00736 705 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 ANXA6P08133 673 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 FGF4P08620 206 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 CPB1P15086 417 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 DDX5P17844 614 aaKnown RBP14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 NFKB1P19838 968 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 PRKACGP22612 351 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 CASP2P42575 452 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 KCNC1P48547 511 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 CLK1P49759 484 aaKnown RBP14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 LAPTM5Q13571 262 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 PCSK7Q16549 785 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 SLC10A6Q3KNW5 377 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 TBRG1Q3YBR2 411 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 RBM20Q5T481 1227 aaKnown RBP14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 SPESP1Q6UW49 350 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 TP53I13Q8NBR0 393 aaPredicted RBP14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 ISG20Q96AZ6 181 aaKnown RBP14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 PYCR2Q96C36 320 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 TUBGCP3Q96CW5 907 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 ITCHQ96J02 903 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 NUAK2Q9H093 628 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 TUBB1Q9H4B7 451 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 WDR6Q9NNW5 1121 aaKnown RBP14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 TAS2R9Q9NYW1 312 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 AASSQ9UDR5 926 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 SNX6Q9UNH7 406 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 TNFSF13BQ9Y275 285 aa14.46□□□□□ -0.09
VPS9D1-201ENST00000389386 ASB14A6NK59 587 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 DSCR3O14972 297 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 CDK14O94921 469 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 CST1P01037 141 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 CYP11A1P05108 521 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 ITGB6P18564 788 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 ATICP31939 592 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 FOXA1P55317 472 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 MVKQ03426 396 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 NKG7Q16617 165 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 AMHR2Q16671 573 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 BCL7AQ4VC05 210 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 TJAP1Q5JTD0 557 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 IL31Q6EBC2 164 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 ESRP1Q6NXG1 681 aaKnown RBP14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 GPR142Q7Z601 462 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 DPP9Q86TI2 863 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 NOXA1Q86UR1 476 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 MICU2Q8IYU8 434 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 TMEM199Q8N511 208 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 HPDLQ96IR7 371 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 RIPOR3Q96MK2 946 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 C2orf49Q9BVC5 232 aaPredicted RBP14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 TOR4AQ9NXH8 423 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 POLG2Q9UHN1 485 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 ARIH1Q9Y4X5 557 aaPredicted RBP14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 PCDHB14Q9Y5E9 798 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 C12orf71A8MTZ7 269 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 H3BRB1 525 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 PGLSO95336 258 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 MED26O95402 600 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 SNAI1O95863 264 aaPredicted RBP14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 MYCP01106 439 aaPredicted RBP14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 FTH1P02794 183 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 YES1P07947 543 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 DBTP11182 482 aaKnown RBP14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 S100A5P33763 92 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 GALNT3Q14435 633 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 STARD3Q14849 445 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 SUZ12Q15022 739 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms