RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 SYT17Q9BSW7 474 aa5.23□□□□□ -1.57
RNU6-40P-201ENST00000384254 TM6SF1Q9BZW5 370 aa5.23□□□□□ -1.57
RNU6-40P-201ENST00000384254 TBC1D17Q9HA65 648 aa5.23□□□□□ -1.57
RNU6-40P-201ENST00000384254 UBTD1Q9HAC8 227 aa5.23□□□□□ -1.57
RNU6-40P-201ENST00000384254 MIOSQ9NXC5 875 aa5.23□□□□□ -1.57
RNU6-40P-201ENST00000384254 MALT1Q9UDY8 824 aa5.23□□□□□ -1.57
RNU6-40P-201ENST00000384254 POU2F3Q9UKI9 436 aa5.23□□□□□ -1.57
RNU6-40P-201ENST00000384254 GTF3C4Q9UKN8 822 aa5.23□□□□□ -1.57
RNU6-40P-201ENST00000384254 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.23□□□□□ -1.57
RNU6-40P-201ENST00000384254 DVL1O14640 695 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 CAMTA2O94983 1202 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 CELF2O95319 508 aaKnown RBP5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 C22orf31O95567 290 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 LDLRP01130 860 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 PENKP01210 267 aaPredicted RBP5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 ACHEP22303 614 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 CCKBRP32239 447 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 CDKN2AP42771 156 aaKnown RBP5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 ISL1P61371 349 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 SNTA1Q13424 505 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 GTF2H2Q13888 395 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 SETMARQ53H47 684 aaPredicted RBP5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 RNASEH2BQ5TBB1 312 aaKnown RBP5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 OR7E24Q6IFN5 339 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 GTF2H2CQ6P1K8 395 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 KLC3Q6P597 504 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 PPP1R21Q6ZMI0 780 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 C9orf47Q6ZRZ4 202 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 ZBTB49Q6ZSB9 765 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 Q75L30 129 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 DNAJB7Q7Z6W7 309 aaPredicted RBP5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 TMPRSS12Q86WS5 348 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 KMT5CQ86Y97 462 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 ZNF595Q8IYB9 648 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 MOSPD2Q8NHP6 518 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 ZFAND2BQ8WV99 257 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 ROBO4Q8WZ75 1007 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 SMPDL3BQ92485 455 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 FIG4Q92562 907 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 FAM162AQ96A26 154 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 ZNF582Q96NG8 517 aaPredicted RBP5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 OLFM1Q99784 485 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 DPAGT1Q9H3H5 408 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 MBNL1Q9NR56 388 aaKnown RBP5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 TMEM30AQ9NV96 361 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 KLHL9Q9P2J3 617 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 CPSF3Q9UKF6 684 aaKnown RBP5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 OR2W1Q9Y3N9 320 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 NME7Q9Y5B8 376 aa5.22□□□□□ -1.57
RNU6-40P-201ENST00000384254 PRSS51A0A1B0GVH4 220 aa5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 MED19A0JLT2 244 aaPredicted RBP5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 ELOVL7A1L3X0 281 aa5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 LACTBL1A8MY62 500 aa5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 HNRNPCL2B2RXH8 293 aa5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 EIF3DO15371 548 aaKnown RBP eCLIP5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 SPRY1O43609 319 aaPredicted RBP5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 GPR137BO60478 399 aa5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 H1F0P07305 194 aaKnown RBP5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 KRT19P08727 400 aa5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 OR2T7P0C7T2 308 aa5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 ZNF23P17027 643 aa5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 TCEA1P23193 301 aaKnown RBP5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 COPB2P35606 906 aa5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 NPY4RP50391 375 aa5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 CAPZA1P52907 286 aa5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 RBPJQ06330 500 aa5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 SCN1BQ07699 218 aa5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 SLC20A2Q08357 652 aa5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 SF3B4Q15427 424 aaKnown RBP eCLIP5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 VWC2Q2TAL6 325 aa5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 AWAT2Q6E213 333 aa5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 DCLRE1AQ6PJP8 1040 aa5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 SPATA22Q8NHS9 363 aa5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 BICD1Q96G01 975 aa5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 OXNAD1Q96HP4 312 aaPredicted RBP5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 RMDN2Q96LZ7 410 aa5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 C16orf70Q9BSU1 422 aa5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 LMF2Q9BU23 707 aaKnown RBP5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 ABHD6Q9BV23 337 aa5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 THUMPD3Q9BV44 507 aaKnown RBP5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 ST6GALNAC4Q9H4F1 302 aa5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 PRMT7Q9NVM4 692 aaPredicted RBP5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 RHCGQ9UBD6 479 aa5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 PCDHAC2Q9Y5I4 1007 aa5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 POMT1Q9Y6A1 747 aa5.21□□□□□ -1.58
RNU6-40P-201ENST00000384254 TRAV34A0A0B4J273 112 aa5.2□□□□□ -1.58
RNU6-40P-201ENST00000384254 ZCWPW2A0A1B0GU75 182 aa5.2□□□□□ -1.58
RNU6-40P-201ENST00000384254 WDR1O75083 606 aa5.2□□□□□ -1.58
RNU6-40P-201ENST00000384254 SLU7O95391 586 aaKnown RBP5.2□□□□□ -1.58
RNU6-40P-201ENST00000384254 ZNF12P17014 697 aa5.2□□□□□ -1.58
RNU6-40P-201ENST00000384254 BMXP51813 675 aa5.2□□□□□ -1.58
RNU6-40P-201ENST00000384254 RELQ04864 619 aaPredicted RBP5.2□□□□□ -1.58
RNU6-40P-201ENST00000384254 LTBQ06643 244 aa5.2□□□□□ -1.58
RNU6-40P-201ENST00000384254 RAB6CQ53S08 254 aa5.2□□□□□ -1.58
RNU6-40P-201ENST00000384254 NDUFAF5Q5TEU4 345 aa5.2□□□□□ -1.58
RNU6-40P-201ENST00000384254 PACS1Q6VY07 963 aa5.2□□□□□ -1.58
RNU6-40P-201ENST00000384254 TMPRSS11FQ6ZWK6 438 aa5.2□□□□□ -1.58
RNU6-40P-201ENST00000384254 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.2□□□□□ -1.58
RNU6-40P-201ENST00000384254 CCAR2Q8N163 923 aaKnown RBP5.2□□□□□ -1.58
RNU6-40P-201ENST00000384254 RBMXL3Q8N7X1 1067 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms