RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 LDLRP01130 860 aa17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 HLA-DPA1P20036 260 aa17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 RRADP55042 308 aa17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 DMPKQ09013 629 aa17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 PRKAA1Q13131 559 aa17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 KRT33BQ14525 404 aa17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 PDK1Q15118 436 aa17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 LDLRAP1Q5SW96 308 aa17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 GPRC6AQ5T6X5 926 aa17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 FAM198BQ6UWH4 519 aa17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 RFX6Q8HWS3 928 aa17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 SRRM1Q8IYB3 904 aaKnown RBP17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 SYTL1Q8IYJ3 562 aa17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 IQCKQ8N0W5 287 aa17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 OR4E2Q8NGC2 313 aa17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 OR8K5Q8NH50 307 aa17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 BLOC1S5Q8TDH9 187 aa17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 SGSM3Q96HU1 749 aa17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 NLNQ9BYT8 704 aa17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 KLHL25Q9H0H3 589 aa17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 ACTR5Q9H9F9 607 aaPredicted RBP17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 SLC24A2Q9UI40 661 aa17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 CELSR2Q9HCU4 2923 aa17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 SEC16AO15027 2179 aa17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 MDC1Q14676 2089 aaKnown RBP17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 PCSK5Q92824 1860 aa17.31■□□□□ 0.36
PDLIM4-202ENST00000379018 GLYATL1P3A0A0U1RQE8 302 aa17.31■□□□□ 0.36
PDLIM4-202ENST00000379018 POLBP06746 335 aa17.31■□□□□ 0.36
PDLIM4-202ENST00000379018 RAB40ALP0C0E4 278 aa17.31■□□□□ 0.36
PDLIM4-202ENST00000379018 TNNT1P13805 278 aa17.31■□□□□ 0.36
PDLIM4-202ENST00000379018 MSH3P20585 1137 aa17.31■□□□□ 0.36
PDLIM4-202ENST00000379018 VARSP26640 1264 aaKnown RBP17.31■□□□□ 0.36
PDLIM4-202ENST00000379018 HNRNPH3P31942 346 aaKnown RBP17.31■□□□□ 0.36
PDLIM4-202ENST00000379018 HMGCLP35914 325 aa17.31■□□□□ 0.36
PDLIM4-202ENST00000379018 CHRNA4P43681 627 aa17.31■□□□□ 0.36
PDLIM4-202ENST00000379018 TNNT3P45378 269 aaPredicted RBP17.31■□□□□ 0.36
PDLIM4-202ENST00000379018 LMAN1P49257 510 aa17.31■□□□□ 0.36
PDLIM4-202ENST00000379018 ELOAQ14241 798 aaKnown RBP17.31■□□□□ 0.36
PDLIM4-202ENST00000379018 MESDQ14696 234 aa17.31■□□□□ 0.36
PDLIM4-202ENST00000379018 PLEKHN1Q494U1 663 aaPredicted RBP17.31■□□□□ 0.36
PDLIM4-202ENST00000379018 ZNF517Q6ZMY9 492 aaPredicted RBP17.31■□□□□ 0.36
PDLIM4-202ENST00000379018 MED25Q71SY5 747 aa17.31■□□□□ 0.36
PDLIM4-202ENST00000379018 GLT6D1Q7Z4J2 308 aa17.31■□□□□ 0.36
PDLIM4-202ENST00000379018 TMEM102Q8N9M5 508 aaPredicted RBP17.31■□□□□ 0.36
PDLIM4-202ENST00000379018 OR1L3Q8NH93 324 aa17.31■□□□□ 0.36
PDLIM4-202ENST00000379018 PACSIN1Q9BY11 444 aa17.31■□□□□ 0.36
PDLIM4-202ENST00000379018 SLC5A6Q9Y289 635 aa17.31■□□□□ 0.36
PDLIM4-202ENST00000379018 BTRCQ9Y297 605 aa17.31■□□□□ 0.36
PDLIM4-202ENST00000379018 CCDC88CQ9P219 2028 aa17.31■□□□□ 0.36
PDLIM4-202ENST00000379018 ANKUB1A6NFN9 424 aa17.3■□□□□ 0.36
PDLIM4-202ENST00000379018 C9J4A7 227 aa17.3■□□□□ 0.36
PDLIM4-202ENST00000379018 KRT1P04264 644 aa17.3■□□□□ 0.36
PDLIM4-202ENST00000379018 SLC35G4P0C7Q5 338 aa17.3■□□□□ 0.36
PDLIM4-202ENST00000379018 PTPN3P26045 913 aa17.3■□□□□ 0.36
PDLIM4-202ENST00000379018 PREPP48147 710 aa17.3■□□□□ 0.36
PDLIM4-202ENST00000379018 LONRF2Q1L5Z9 754 aa17.3■□□□□ 0.36
PDLIM4-202ENST00000379018 RAB43Q86YS6 212 aa17.3■□□□□ 0.36
PDLIM4-202ENST00000379018 DDHD1Q8NEL9 900 aa17.3■□□□□ 0.36
PDLIM4-202ENST00000379018 TADA1Q96BN2 335 aa17.3■□□□□ 0.36
PDLIM4-202ENST00000379018 RMDN2Q96LZ7 410 aa17.3■□□□□ 0.36
PDLIM4-202ENST00000379018 LRFN5Q96NI6 719 aa17.3■□□□□ 0.36
PDLIM4-202ENST00000379018 SRPK1Q96SB4 655 aaKnown RBP17.3■□□□□ 0.36
PDLIM4-202ENST00000379018 ILKAPQ9H0C8 392 aaPredicted RBP17.3■□□□□ 0.36
PDLIM4-202ENST00000379018 DEF6Q9H4E7 631 aa17.3■□□□□ 0.36
PDLIM4-202ENST00000379018 LATS2Q9NRM7 1088 aa17.3■□□□□ 0.36
PDLIM4-202ENST00000379018 PCMTD2Q9NV79 361 aa17.3■□□□□ 0.36
PDLIM4-202ENST00000379018 LDB2O43679 373 aa17.29■□□□□ 0.36
PDLIM4-202ENST00000379018 NFKB1P19838 968 aa17.29■□□□□ 0.36
PDLIM4-202ENST00000379018 RORAP35398 523 aa17.29■□□□□ 0.36
PDLIM4-202ENST00000379018 WNT3AP56704 352 aa17.29■□□□□ 0.36
PDLIM4-202ENST00000379018 ITGA9Q13797 1035 aa17.29■□□□□ 0.36
PDLIM4-202ENST00000379018 PTPRCAPQ14761 206 aa17.29■□□□□ 0.36
PDLIM4-202ENST00000379018 NCF4Q15080 339 aa17.29■□□□□ 0.36
PDLIM4-202ENST00000379018 TEX44Q53QW1 395 aa17.29■□□□□ 0.36
PDLIM4-202ENST00000379018 ODF2Q5BJF6 829 aa17.29■□□□□ 0.36
PDLIM4-202ENST00000379018 SIRPB2Q5JXA9 342 aa17.29■□□□□ 0.36
PDLIM4-202ENST00000379018 VWA5B1Q5TIE3 1220 aa17.29■□□□□ 0.36
PDLIM4-202ENST00000379018 METRNLQ641Q3 311 aa17.29■□□□□ 0.36
PDLIM4-202ENST00000379018 SLC9A4Q6AI14 798 aa17.29■□□□□ 0.36
PDLIM4-202ENST00000379018 DAAM2Q86T65 1068 aa17.29■□□□□ 0.36
PDLIM4-202ENST00000379018 GLIS1Q8NBF1 620 aa17.29■□□□□ 0.36
PDLIM4-202ENST00000379018 CTNNBL1Q8WYA6 563 aaPredicted RBP17.29■□□□□ 0.36
PDLIM4-202ENST00000379018 RNF25Q96BH1 459 aaPredicted RBP17.29■□□□□ 0.36
PDLIM4-202ENST00000379018 SMAD5Q99717 465 aaKnown RBP17.29■□□□□ 0.36
PDLIM4-202ENST00000379018 NRTNQ99748 197 aa17.29■□□□□ 0.36
PDLIM4-202ENST00000379018 KIR3DX1Q9H7L2 352 aa17.29■□□□□ 0.36
PDLIM4-202ENST00000379018 UVRAGQ9P2Y5 699 aa17.29■□□□□ 0.36
PDLIM4-202ENST00000379018 FAM153AQ9UHL3 310 aa17.29■□□□□ 0.36
PDLIM4-202ENST00000379018 PKP3Q9Y446 797 aa17.29■□□□□ 0.36
PDLIM4-202ENST00000379018 DIDO1Q9BTC0 2240 aaKnown RBP17.29■□□□□ 0.36
PDLIM4-202ENST00000379018 MGAT4DA6NG13 374 aa17.28■□□□□ 0.36
PDLIM4-202ENST00000379018 MASP2O00187 686 aa17.28■□□□□ 0.36
PDLIM4-202ENST00000379018 CBX6O95503 412 aa17.28■□□□□ 0.36
PDLIM4-202ENST00000379018 CAPN1P07384 714 aa17.28■□□□□ 0.36
PDLIM4-202ENST00000379018 PVRP15151 417 aa17.28■□□□□ 0.36
PDLIM4-202ENST00000379018 GLRBP48167 497 aa17.28■□□□□ 0.36
PDLIM4-202ENST00000379018 NR1I3Q14994 352 aa17.28■□□□□ 0.36
PDLIM4-202ENST00000379018 LLGL1Q15334 1064 aa17.28■□□□□ 0.36
PDLIM4-202ENST00000379018 SLC14A2Q15849 920 aa17.28■□□□□ 0.36
PDLIM4-202ENST00000379018 ZRANB3Q5FWF4 1079 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms