RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 KLHL3Q9UH77 587 aa18.52■□□□□ 0.56
TMEM88B-201ENST00000378821 C2orf81A6NN90 581 aa18.51■□□□□ 0.55
TMEM88B-201ENST00000378821 ERI2A8K979 691 aaKnown RBP18.51■□□□□ 0.55
TMEM88B-201ENST00000378821 FANCGO15287 622 aa18.51■□□□□ 0.55
TMEM88B-201ENST00000378821 SGTAO43765 313 aa18.51■□□□□ 0.55
TMEM88B-201ENST00000378821 STK17BO94768 372 aa18.51■□□□□ 0.55
TMEM88B-201ENST00000378821 SUN1O94901 812 aa18.51■□□□□ 0.55
TMEM88B-201ENST00000378821 PRAMEF1O95521 474 aa18.51■□□□□ 0.55
TMEM88B-201ENST00000378821 HALP42357 657 aa18.51■□□□□ 0.55
TMEM88B-201ENST00000378821 LEPRP48357 1165 aaKnown RBP18.51■□□□□ 0.55
TMEM88B-201ENST00000378821 LMAN1P49257 510 aa18.51■□□□□ 0.55
TMEM88B-201ENST00000378821 PPM1FP49593 454 aaPredicted RBP18.51■□□□□ 0.55
TMEM88B-201ENST00000378821 IL11RAQ14626 422 aa18.51■□□□□ 0.55
TMEM88B-201ENST00000378821 RPE65Q16518 533 aa18.51■□□□□ 0.55
TMEM88B-201ENST00000378821 CYP1B1Q16678 543 aa18.51■□□□□ 0.55
TMEM88B-201ENST00000378821 CRTC2Q53ET0 693 aaPredicted RBP18.51■□□□□ 0.55
TMEM88B-201ENST00000378821 OR52K1Q8NGK4 314 aa18.51■□□□□ 0.55
TMEM88B-201ENST00000378821 OR13C4Q8NGS5 318 aa18.51■□□□□ 0.55
TMEM88B-201ENST00000378821 ZFPM2Q8WW38 1151 aa18.51■□□□□ 0.55
TMEM88B-201ENST00000378821 RSC1A1Q92681 617 aa18.51■□□□□ 0.55
TMEM88B-201ENST00000378821 MAGOHBQ96A72 148 aaKnown RBP18.51■□□□□ 0.55
TMEM88B-201ENST00000378821 LINC00615Q96LM1 132 aaPredicted RBP18.51■□□□□ 0.55
TMEM88B-201ENST00000378821 TGM7Q96PF1 710 aa18.51■□□□□ 0.55
TMEM88B-201ENST00000378821 FKBPLQ9UIM3 349 aa18.51■□□□□ 0.55
TMEM88B-201ENST00000378821 E7EVH7 732 aa18.5■□□□□ 0.55
TMEM88B-201ENST00000378821 J3QKU1 62 aa18.5■□□□□ 0.55
TMEM88B-201ENST00000378821 LDB2O43679 373 aa18.5■□□□□ 0.55
TMEM88B-201ENST00000378821 SRP72O76094 671 aaKnown RBP18.5■□□□□ 0.55
TMEM88B-201ENST00000378821 CRTAMO95727 393 aa18.5■□□□□ 0.55
TMEM88B-201ENST00000378821 TCP1P17987 556 aaKnown RBP18.5■□□□□ 0.55
TMEM88B-201ENST00000378821 GRIA1P42261 906 aa18.5■□□□□ 0.55
TMEM88B-201ENST00000378821 PDE1BQ01064 536 aa18.5■□□□□ 0.55
TMEM88B-201ENST00000378821 POU6F1Q14863 301 aa18.5■□□□□ 0.55
TMEM88B-201ENST00000378821 BCL7AQ4VC05 210 aa18.5■□□□□ 0.55
TMEM88B-201ENST00000378821 LINC00523Q86TU6 105 aa18.5■□□□□ 0.55
TMEM88B-201ENST00000378821 OR2L2Q8NH16 312 aa18.5■□□□□ 0.55
TMEM88B-201ENST00000378821 ZDHHC12Q96GR4 267 aa18.5■□□□□ 0.55
TMEM88B-201ENST00000378821 NAPGQ99747 312 aaPredicted RBP18.5■□□□□ 0.55
TMEM88B-201ENST00000378821 ARHGAP9Q9BRR9 750 aa18.5■□□□□ 0.55
TMEM88B-201ENST00000378821 EFHD1Q9BUP0 239 aa18.5■□□□□ 0.55
TMEM88B-201ENST00000378821 ADNPQ9H2P0 1102 aa18.5■□□□□ 0.55
TMEM88B-201ENST00000378821 KCND1Q9NSA2 647 aa18.5■□□□□ 0.55
TMEM88B-201ENST00000378821 GEMIN8Q9NWZ8 242 aaKnown RBP18.5■□□□□ 0.55
TMEM88B-201ENST00000378821 LOC101059948A0A1B0GTJ6 334 aa18.49■□□□□ 0.55
TMEM88B-201ENST00000378821 MGAT4DA6NG13 374 aa18.49■□□□□ 0.55
TMEM88B-201ENST00000378821 OR2AG2A6NM03 316 aa18.49■□□□□ 0.55
TMEM88B-201ENST00000378821 ZNF891A8MT65 544 aaPredicted RBP18.49■□□□□ 0.55
TMEM88B-201ENST00000378821 CCL22O00626 93 aa18.49■□□□□ 0.55
TMEM88B-201ENST00000378821 PHF2O75151 1096 aa18.49■□□□□ 0.55
TMEM88B-201ENST00000378821 APRTP07741 180 aa18.49■□□□□ 0.55
TMEM88B-201ENST00000378821 FAM87AP0C7U9 286 aa18.49■□□□□ 0.55
TMEM88B-201ENST00000378821 FGF5P12034 268 aa18.49■□□□□ 0.55
TMEM88B-201ENST00000378821 COILP38432 576 aaPredicted RBP18.49■□□□□ 0.55
TMEM88B-201ENST00000378821 BASP1P80723 227 aaKnown RBP18.49■□□□□ 0.55
TMEM88B-201ENST00000378821 TMPRSS15P98073 1019 aa18.49■□□□□ 0.55
TMEM88B-201ENST00000378821 SEPT6Q14141 434 aa18.49■□□□□ 0.55
TMEM88B-201ENST00000378821 NFE2L1Q14494 772 aa18.49■□□□□ 0.55
TMEM88B-201ENST00000378821 TRIP13Q15645 432 aaPredicted RBP18.49■□□□□ 0.55
TMEM88B-201ENST00000378821 PAPD7Q5XG87 772 aaKnown RBP18.49■□□□□ 0.55
TMEM88B-201ENST00000378821 C4orf22Q6V702 233 aa18.49■□□□□ 0.55
TMEM88B-201ENST00000378821 PPP1R21Q6ZMI0 780 aa18.49■□□□□ 0.55
TMEM88B-201ENST00000378821 MICALCLQ6ZW33 695 aa18.49■□□□□ 0.55
TMEM88B-201ENST00000378821 GPR150Q8NGU9 434 aa18.49■□□□□ 0.55
TMEM88B-201ENST00000378821 DNAJC1Q96KC8 554 aaKnown RBP18.49■□□□□ 0.55
TMEM88B-201ENST00000378821 CATSPER2Q96P56 530 aa18.49■□□□□ 0.55
TMEM88B-201ENST00000378821 ACSL5Q9ULC5 683 aa18.49■□□□□ 0.55
TMEM88B-201ENST00000378821 KIF1CO43896 1103 aaKnown RBP18.48■□□□□ 0.55
TMEM88B-201ENST00000378821 MTHFD1P11586 935 aaKnown RBP18.48■□□□□ 0.55
TMEM88B-201ENST00000378821 NELFEP18615 380 aaKnown RBP18.48■□□□□ 0.55
TMEM88B-201ENST00000378821 MSH3P20585 1137 aa18.48■□□□□ 0.55
TMEM88B-201ENST00000378821 STAT5AP42229 794 aa18.48■□□□□ 0.55
TMEM88B-201ENST00000378821 VPS41P49754 854 aa18.48■□□□□ 0.55
TMEM88B-201ENST00000378821 CDH17Q12864 832 aa18.48■□□□□ 0.55
TMEM88B-201ENST00000378821 FNBP1LQ5T0N5 605 aa18.48■□□□□ 0.55
TMEM88B-201ENST00000378821 BORAQ6PGQ7 559 aa18.48■□□□□ 0.55
TMEM88B-201ENST00000378821 CCDC137Q6PK04 289 aaKnown RBP18.48■□□□□ 0.55
TMEM88B-201ENST00000378821 BEND7Q8N7W2 519 aaPredicted RBP18.48■□□□□ 0.55
TMEM88B-201ENST00000378821 DNAAF3Q8N9W5 541 aa18.48■□□□□ 0.55
TMEM88B-201ENST00000378821 SLC41A2Q96JW4 573 aa18.48■□□□□ 0.55
TMEM88B-201ENST00000378821 CAPZA3Q96KX2 299 aa18.48■□□□□ 0.55
TMEM88B-201ENST00000378821 ASB8Q9H765 288 aa18.48■□□□□ 0.55
TMEM88B-201ENST00000378821 GPN2Q9H9Y4 310 aaPredicted RBP18.48■□□□□ 0.55
TMEM88B-201ENST00000378821 CASS4Q9NQ75 786 aa18.48■□□□□ 0.55
TMEM88B-201ENST00000378821 EIF2B3Q9NR50 452 aaKnown RBP18.48■□□□□ 0.55
TMEM88B-201ENST00000378821 TUBD1Q9UJT1 453 aa18.48■□□□□ 0.55
TMEM88B-201ENST00000378821 IGLV3-16A0A075B6K0 115 aa18.47■□□□□ 0.55
TMEM88B-201ENST00000378821 GOLGA6L10A0A0M3HER8 536 aa18.47■□□□□ 0.55
TMEM88B-201ENST00000378821 CTAGE9A4FU28 777 aa18.47■□□□□ 0.55
TMEM88B-201ENST00000378821 H7C0S8 307 aa18.47■□□□□ 0.55
TMEM88B-201ENST00000378821 TERTO14746 1132 aaKnown RBP18.47■□□□□ 0.55
TMEM88B-201ENST00000378821 KRT14P02533 472 aa18.47■□□□□ 0.55
TMEM88B-201ENST00000378821 PSMA3P25788 255 aa18.47■□□□□ 0.55
TMEM88B-201ENST00000378821 SH3BP2P78314 561 aa18.47■□□□□ 0.55
TMEM88B-201ENST00000378821 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.47■□□□□ 0.55
TMEM88B-201ENST00000378821 ZNF658BQ4V348 819 aaPredicted RBP18.47■□□□□ 0.55
TMEM88B-201ENST00000378821 CCDC38Q502W7 563 aa18.47■□□□□ 0.55
TMEM88B-201ENST00000378821 CACHD1Q5VU97 1274 aa18.47■□□□□ 0.55
TMEM88B-201ENST00000378821 CAPRIN2Q6IMN6 1127 aaKnown RBP18.47■□□□□ 0.55
TMEM88B-201ENST00000378821 KLHL35Q6PF15 583 aa18.47■□□□□ 0.55
TMEM88B-201ENST00000378821 ESX1Q8N693 406 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms