RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 SLC9B2Q86UD5 537 aa18.36■□□□□ 0.53
SSU72-203ENST00000378725 LKAAEAR1Q8TD35 194 aa18.36■□□□□ 0.53
SSU72-203ENST00000378725 ELMO1Q92556 727 aa18.36■□□□□ 0.53
SSU72-203ENST00000378725 PANX3Q96QZ0 392 aa18.36■□□□□ 0.53
SSU72-203ENST00000378725 FMO2Q99518 471 aa18.36■□□□□ 0.53
SSU72-203ENST00000378725 OR52A5Q9H2C5 316 aa18.36■□□□□ 0.53
SSU72-203ENST00000378725 LRRC4CQ9HCJ2 640 aa18.36■□□□□ 0.53
SSU72-203ENST00000378725 SARS2Q9NP81 518 aaKnown RBP18.36■□□□□ 0.53
SSU72-203ENST00000378725 PPANQ9NQ55 473 aaKnown RBP18.36■□□□□ 0.53
SSU72-203ENST00000378725 LATS2Q9NRM7 1088 aa18.36■□□□□ 0.53
SSU72-203ENST00000378725 TRIM16O95361 564 aa18.35■□□□□ 0.53
SSU72-203ENST00000378725 SLU7O95391 586 aaKnown RBP18.35■□□□□ 0.53
SSU72-203ENST00000378725 F7P08709 466 aaPredicted RBP18.35■□□□□ 0.53
SSU72-203ENST00000378725 AOAHP28039 575 aa18.35■□□□□ 0.53
SSU72-203ENST00000378725 HALP42357 657 aa18.35■□□□□ 0.53
SSU72-203ENST00000378725 RPE65Q16518 533 aa18.35■□□□□ 0.53
SSU72-203ENST00000378725 TEX35Q5T0J7 233 aa18.35■□□□□ 0.53
SSU72-203ENST00000378725 N4BP2L1Q5TBK1 243 aaPredicted RBP18.35■□□□□ 0.53
SSU72-203ENST00000378725 ZNF549Q6P9A3 640 aa18.35■□□□□ 0.53
SSU72-203ENST00000378725 CNSTQ6PJW8 725 aa18.35■□□□□ 0.53
SSU72-203ENST00000378725 KRT222Q8N1A0 295 aa18.35■□□□□ 0.53
SSU72-203ENST00000378725 EIF1ADQ8N9N8 165 aaKnown RBP18.35■□□□□ 0.53
SSU72-203ENST00000378725 AVL9Q8NBF6 648 aa18.35■□□□□ 0.53
SSU72-203ENST00000378725 CCDC74AQ96AQ1 378 aa18.35■□□□□ 0.53
SSU72-203ENST00000378725 INSM2Q96T92 566 aaPredicted RBP18.35■□□□□ 0.53
SSU72-203ENST00000378725 WWP1Q9H0M0 922 aa18.35■□□□□ 0.53
SSU72-203ENST00000378725 CPNE7Q9UBL6 633 aa18.35■□□□□ 0.53
SSU72-203ENST00000378725 RABGEF1Q9UJ41 708 aa18.35■□□□□ 0.53
SSU72-203ENST00000378725 COMMD10Q9Y6G5 202 aa18.35■□□□□ 0.53
SSU72-203ENST00000378725 PCNX2A6NKB5 2137 aa18.35■□□□□ 0.53
SSU72-203ENST00000378725 TCRBV9S1A1TA0A576 114 aa18.34■□□□□ 0.53
SSU72-203ENST00000378725 KPNA5O15131 536 aa18.34■□□□□ 0.53
SSU72-203ENST00000378725 GPC4O75487 556 aa18.34■□□□□ 0.53
SSU72-203ENST00000378725 C1QAP02745 245 aa18.34■□□□□ 0.53
SSU72-203ENST00000378725 ITGB6P18564 788 aa18.34■□□□□ 0.53
SSU72-203ENST00000378725 PDHA2P29803 388 aa18.34■□□□□ 0.53
SSU72-203ENST00000378725 CD151P48509 253 aa18.34■□□□□ 0.53
SSU72-203ENST00000378725 ADAMTS14Q8WXS8 1223 aa18.34■□□□□ 0.53
SSU72-203ENST00000378725 SH3KBP1Q96B97 665 aa18.34■□□□□ 0.53
SSU72-203ENST00000378725 CCDC3Q9BQI4 270 aa18.34■□□□□ 0.53
SSU72-203ENST00000378725 UCK1Q9HA47 277 aa18.34■□□□□ 0.53
SSU72-203ENST00000378725 FAM8A1Q9UBU6 413 aa18.34■□□□□ 0.53
SSU72-203ENST00000378725 NFU1Q9UMS0 254 aa18.34■□□□□ 0.53
SSU72-203ENST00000378725 PSMD13Q9UNM6 376 aa18.34■□□□□ 0.53
SSU72-203ENST00000378725 CDYLQ9Y232 598 aa18.34■□□□□ 0.53
SSU72-203ENST00000378725 OR52A4PA6NMU1 304 aa18.33■□□□□ 0.52
SSU72-203ENST00000378725 RHPN2P1A8MT19 583 aa18.33■□□□□ 0.52
SSU72-203ENST00000378725 SPAG6O75602 509 aa18.33■□□□□ 0.52
SSU72-203ENST00000378725 SLCO2B1O94956 709 aa18.33■□□□□ 0.52
SSU72-203ENST00000378725 GPR3P46089 330 aa18.33■□□□□ 0.52
SSU72-203ENST00000378725 PREPP48147 710 aa18.33■□□□□ 0.52
SSU72-203ENST00000378725 HHEXQ03014 270 aa18.33■□□□□ 0.52
SSU72-203ENST00000378725 NAPRTQ6XQN6 538 aa18.33■□□□□ 0.52
SSU72-203ENST00000378725 CAPN12Q6ZSI9 719 aa18.33■□□□□ 0.52
SSU72-203ENST00000378725 SLC26A11Q86WA9 606 aa18.33■□□□□ 0.52
SSU72-203ENST00000378725 SPDYE1Q8NFV5 336 aaPredicted RBP18.33■□□□□ 0.52
SSU72-203ENST00000378725 ASZ1Q8WWH4 475 aa18.33■□□□□ 0.52
SSU72-203ENST00000378725 RMDN2Q96LZ7 410 aa18.33■□□□□ 0.52
SSU72-203ENST00000378725 SLC40A1Q9NP59 571 aa18.33■□□□□ 0.52
SSU72-203ENST00000378725 SMYD2Q9NRG4 433 aa18.33■□□□□ 0.52
SSU72-203ENST00000378725 POT1Q9NUX5 634 aa18.33■□□□□ 0.52
SSU72-203ENST00000378725 ZFATQ9P243 1243 aa18.33■□□□□ 0.52
SSU72-203ENST00000378725 KLHL42Q9P2K6 505 aa18.33■□□□□ 0.52
SSU72-203ENST00000378725 SLC17A6Q9P2U8 582 aa18.33■□□□□ 0.52
SSU72-203ENST00000378725 MED16Q9Y2X0 877 aa18.33■□□□□ 0.52
SSU72-203ENST00000378725 FAM159BA6NKW6 160 aa18.32■□□□□ 0.52
SSU72-203ENST00000378725 B4GAT1O43505 415 aa18.32■□□□□ 0.52
SSU72-203ENST00000378725 OPA1O60313 960 aa18.32■□□□□ 0.52
SSU72-203ENST00000378725 NIPSNAP2O75323 286 aa18.32■□□□□ 0.52
SSU72-203ENST00000378725 VIPP01282 170 aa18.32■□□□□ 0.52
SSU72-203ENST00000378725 APOA4P06727 396 aa18.32■□□□□ 0.52
SSU72-203ENST00000378725 SLC35G4P0C7Q5 338 aa18.32■□□□□ 0.52
SSU72-203ENST00000378725 MTHFD1P11586 935 aaKnown RBP18.32■□□□□ 0.52
SSU72-203ENST00000378725 CHRM3P20309 590 aa18.32■□□□□ 0.52
SSU72-203ENST00000378725 KCNA4P22459 653 aa18.32■□□□□ 0.52
SSU72-203ENST00000378725 ACADLP28330 430 aa18.32■□□□□ 0.52
SSU72-203ENST00000378725 BIRC2Q13490 618 aa18.32■□□□□ 0.52
SSU72-203ENST00000378725 BOP1Q14137 746 aaKnown RBP18.32■□□□□ 0.52
SSU72-203ENST00000378725 BRD3Q15059 726 aa18.32■□□□□ 0.52
SSU72-203ENST00000378725 KYNUQ16719 465 aa18.32■□□□□ 0.52
SSU72-203ENST00000378725 PLEKHS1Q5SXH7 462 aa18.32■□□□□ 0.52
SSU72-203ENST00000378725 RBM12BQ8IXT5 1001 aaKnown RBP18.32■□□□□ 0.52
SSU72-203ENST00000378725 ZFPM2Q8WW38 1151 aa18.32■□□□□ 0.52
SSU72-203ENST00000378725 KCNJ9Q92806 393 aa18.32■□□□□ 0.52
SSU72-203ENST00000378725 TMEM159Q96B96 161 aa18.32■□□□□ 0.52
SSU72-203ENST00000378725 MCMBPQ9BTE3 642 aa18.32■□□□□ 0.52
SSU72-203ENST00000378725 AARSD1Q9BTE6 412 aaKnown RBP18.32■□□□□ 0.52
SSU72-203ENST00000378725 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.32■□□□□ 0.52
SSU72-203ENST00000378725 CCDC68Q9H2F9 335 aa18.32■□□□□ 0.52
SSU72-203ENST00000378725 STN1Q9H668 368 aaKnown RBP18.32■□□□□ 0.52
SSU72-203ENST00000378725 ANKZF1Q9H8Y5 726 aa18.32■□□□□ 0.52
SSU72-203ENST00000378725 NSMCE4AQ9NXX6 385 aa18.32■□□□□ 0.52
SSU72-203ENST00000378725 NINJ2Q9NZG7 142 aa18.32■□□□□ 0.52
SSU72-203ENST00000378725 GALPQ9UBC7 116 aa18.32■□□□□ 0.52
SSU72-203ENST00000378725 PSAT1Q9Y617 370 aa18.32■□□□□ 0.52
SSU72-203ENST00000378725 PRAMEF33A0A0G2JMD5 474 aa18.31■□□□□ 0.52
SSU72-203ENST00000378725 CXorf49A8MYA2 514 aaPredicted RBP18.31■□□□□ 0.52
SSU72-203ENST00000378725 NTN3O00634 580 aaPredicted RBP18.31■□□□□ 0.52
SSU72-203ENST00000378725 CD9P21926 228 aa18.31■□□□□ 0.52
SSU72-203ENST00000378725 TNFRSF8P28908 595 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms