RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 CAPN15O75808 1086 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 HLA-DQB2P05538 268 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 IDSP22304 550 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 SRP54P61011 504 aaKnown RBP14.84□□□□□ -0.03
NPHP4-201ENST00000378156 LDLRAD1Q5T700 205 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 MSANTD2Q6P1R3 559 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 GATAD2AQ86YP4 633 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 LEMD2Q8NC56 503 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 PDPRQ8NCN5 879 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 AIF1LQ9BQI0 150 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 PCDHAC1Q9H158 963 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 SMOC2Q9H3U7 446 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 PIGUQ9H490 435 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 SCML2Q9UQR0 700 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 TMEM233B4DJY2 109 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 CLDN9O95484 217 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 SSR2P43308 183 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 COPZ1P61923 177 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 LSM3P62310 102 aaKnown RBP14.84□□□□□ -0.03
NPHP4-201ENST00000378156 EIF3MQ7L2H7 374 aaKnown RBP14.84□□□□□ -0.03
NPHP4-201ENST00000378156 C16orf62Q7Z3J2 963 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 IZUMO1Q8IYV9 350 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 CBR4Q8N4T8 237 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 PHC3Q8NDX5 983 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 ARNTL2Q8WYA1 636 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 BTBD9Q96Q07 612 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 C11orf49Q9H6J7 331 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 FNIP2Q9P278 1114 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 GABRQQ9UN88 632 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 C10orf71Q711Q0 1435 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 E7ESA3 106 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 OR10H2O60403 315 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 NADKO95544 446 aaPredicted RBP14.84□□□□□ -0.03
NPHP4-201ENST00000378156 UMPSP11172 480 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 ITGA2P17301 1181 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 SLC11A1P49279 550 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 MAMDC4Q6UXC1 1216 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 CFAP206Q8IYR0 622 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 OR2T12Q8NG77 320 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 MKL2Q9ULH7 1088 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 U3KQV3 271 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 MYH1P12882 1939 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 AKAP11Q9UKA4 1901 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 TTC24A2A3L6 582 aaPredicted RBP14.83□□□□□ -0.03
NPHP4-201ENST00000378156 IQCF5A8MTL0 148 aa14.83□□□□□ -0.03
NPHP4-201ENST00000378156 AHSGP02765 367 aa14.83□□□□□ -0.03
NPHP4-201ENST00000378156 RCVRNP35243 200 aa14.83□□□□□ -0.03
NPHP4-201ENST00000378156 CSKP41240 450 aa14.83□□□□□ -0.03
NPHP4-201ENST00000378156 NSG1P42857 185 aa14.83□□□□□ -0.03
NPHP4-201ENST00000378156 POLR2JP52435 117 aaKnown RBP14.83□□□□□ -0.03
NPHP4-201ENST00000378156 OLR1P78380 273 aa14.83□□□□□ -0.03
NPHP4-201ENST00000378156 CPTPQ5TA50 214 aa14.83□□□□□ -0.03
NPHP4-201ENST00000378156 MBLAC2Q68D91 279 aa14.83□□□□□ -0.03
NPHP4-201ENST00000378156 GLYATQ6IB77 296 aa14.83□□□□□ -0.03
NPHP4-201ENST00000378156 TBC1D21Q8IYX1 336 aa14.83□□□□□ -0.03
NPHP4-201ENST00000378156 EZH1Q92800 747 aaPredicted RBP14.83□□□□□ -0.03
NPHP4-201ENST00000378156 PPP1R14BQ96C90 147 aa14.83□□□□□ -0.03
NPHP4-201ENST00000378156 VRTNQ9H8Y1 702 aa14.83□□□□□ -0.03
NPHP4-201ENST00000378156 CMTM6Q9NX76 183 aa14.83□□□□□ -0.03
NPHP4-201ENST00000378156 A0A1W2PQ45 241 aaPredicted RBP14.83□□□□□ -0.04
NPHP4-201ENST00000378156 A0A1W2PQY0 241 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 SERPINA1P01009 418 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 XRCC1P18887 633 aaPredicted RBP14.83□□□□□ -0.04
NPHP4-201ENST00000378156 CDK9P50750 372 aaKnown RBP14.83□□□□□ -0.04
NPHP4-201ENST00000378156 KCNQ1P51787 676 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 TXNDC8Q6A555 127 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 ANO7Q6IWH7 933 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 TREML1Q86YW5 311 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 HIPK1Q86Z02 1210 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 OFCC1Q8IZS5 231 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 CAMKK1Q8N5S9 505 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 DENND1AQ8TEH3 1009 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 COX4I2Q96KJ9 171 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 KIFC1Q9BW19 673 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 INTS10Q9NVR2 710 aaKnown RBP14.83□□□□□ -0.04
NPHP4-201ENST00000378156 SLC2A6Q9UGQ3 507 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 IKZF3Q9UKT9 509 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 NAV1Q8NEY1 1877 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 UBR2Q8IWV8 1755 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 CCDC189A1A4V9 331 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 STX16-NPEPL1H3BU86 382 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 CCL5P13501 91 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 KIR3DL1P43629 444 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 PITX1P78337 314 aaPredicted RBP14.83□□□□□ -0.04
NPHP4-201ENST00000378156 LIPEQ05469 1076 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 SF1Q15637 639 aaKnown RBP14.83□□□□□ -0.04
NPHP4-201ENST00000378156 PLA2G4EQ3MJ16 856 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 ZC3HC1Q86WB0 502 aaKnown RBP14.83□□□□□ -0.04
NPHP4-201ENST00000378156 CRTAC1Q9NQ79 661 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 PDLIM7Q9NR12 457 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 HS3ST4Q9Y661 456 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 TRBC1P01850 177 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 SMIM11AP58511 58 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 PTSQ03393 145 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 FPGSQ05932 587 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 PCLAFQ15004 111 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 GPAT3Q53EU6 434 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 IL23RQ5VWK5 629 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 PROSER1Q86XN7 944 aa14.83□□□□□ -0.04
NPHP4-201ENST00000378156 SIRPGQ9P1W8 387 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms