RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 INMTO95050 263 aa16.94■□□□□ 0.3
MCF2L-203ENST00000375604 KIR3DL1P43629 444 aa16.94■□□□□ 0.3
MCF2L-203ENST00000375604 PIK3R6Q5UE93 754 aa16.94■□□□□ 0.3
MCF2L-203ENST00000375604 RPS27LQ71UM5 84 aaKnown RBP16.94■□□□□ 0.3
MCF2L-203ENST00000375604 UBE2J2Q8N2K1 259 aa16.94■□□□□ 0.3
MCF2L-203ENST00000375604 CDH22Q9UJ99 828 aa16.94■□□□□ 0.3
MCF2L-203ENST00000375604 TNFRSF11BO00300 401 aa16.94■□□□□ 0.3
MCF2L-203ENST00000375604 NOS1APO75052 506 aaPredicted RBP16.94■□□□□ 0.3
MCF2L-203ENST00000375604 STX11O75558 287 aa16.94■□□□□ 0.3
MCF2L-203ENST00000375604 PURAQ00577 322 aaKnown RBP16.94■□□□□ 0.3
MCF2L-203ENST00000375604 MXD1Q05195 221 aa16.94■□□□□ 0.3
MCF2L-203ENST00000375604 ZDHHC20Q5W0Z9 365 aa16.94■□□□□ 0.3
MCF2L-203ENST00000375604 FAM47BQ8NA70 645 aa16.94■□□□□ 0.3
MCF2L-203ENST00000375604 TIFAQ96CG3 184 aa16.94■□□□□ 0.3
MCF2L-203ENST00000375604 AP2A2O94973 939 aa16.94■□□□□ 0.3
MCF2L-203ENST00000375604 TGFB1P01137 390 aa16.94■□□□□ 0.3
MCF2L-203ENST00000375604 IDH3AP50213 366 aa16.94■□□□□ 0.3
MCF2L-203ENST00000375604 ILF3Q12906 894 aaKnown RBP eCLIP16.94■□□□□ 0.31e-6■■■■□ 19.7
MCF2L-203ENST00000375604 PIM3Q86V86 326 aa16.94■□□□□ 0.3
MCF2L-203ENST00000375604 AMIGO3Q86WK7 504 aa16.94■□□□□ 0.3
MCF2L-203ENST00000375604 DEPDC4Q8N2C3 294 aa16.94■□□□□ 0.3
MCF2L-203ENST00000375604 GRHL3Q8TE85 626 aa16.94■□□□□ 0.3
MCF2L-203ENST00000375604 ZNF384Q8TF68 577 aa16.94■□□□□ 0.3
MCF2L-203ENST00000375604 CARS2Q9HA77 564 aaKnown RBP16.94■□□□□ 0.3
MCF2L-203ENST00000375604 SSR3Q9UNL2 185 aa16.94■□□□□ 0.3
MCF2L-203ENST00000375604 TSHRP16473 764 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 PSMD4P55036 377 aaKnown RBP16.93■□□□□ 0.3
MCF2L-203ENST00000375604 TEAD2Q15562 447 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 NDUFA9Q16795 377 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 UBAP2Q5T6F2 1119 aaKnown RBP16.93■□□□□ 0.3
MCF2L-203ENST00000375604 TNFAIP8L2Q6P589 184 aaPredicted RBP16.93■□□□□ 0.3
MCF2L-203ENST00000375604 FAM131AQ6UXB0 335 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 GRASPQ7Z6J2 395 aaPredicted RBP16.93■□□□□ 0.3
MCF2L-203ENST00000375604 AP3M1Q9Y2T2 418 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 MYOM1P52179 1685 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 TFECO14948 347 aaPredicted RBP16.93■□□□□ 0.3
MCF2L-203ENST00000375604 LDB2O43679 373 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 AVPR1BP47901 424 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 LIPEQ05469 1076 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 TXNRD3NBQ6F5E7 133 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 TMEM130Q8N3G9 435 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 TSPAN18Q96SJ8 248 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 ERVW-1Q9UQF0 538 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 CAPN8A6NHC0 703 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 NFKBIEO00221 500 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 KHNYNO15037 678 aaKnown RBP16.93■□□□□ 0.3
MCF2L-203ENST00000375604 IGFBP5P24593 272 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 SLC26A3P40879 764 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 NDST2P52849 883 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 CDH12P55289 794 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 SMIM11AP58511 58 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 ARHGAP1Q07960 439 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 CYP27C1Q4G0S4 372 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 CYP2U1Q7Z449 544 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 NKIRAS2Q9NYR9 191 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 DTLQ9NZJ0 730 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 NUDT4Q9NZJ9 180 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 NOCTQ9UK39 431 aaKnown RBP16.93■□□□□ 0.3
MCF2L-203ENST00000375604 CA12O43570 354 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 HLA-EP13747 358 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 DDX6P26196 483 aaKnown RBP eCLIP16.93■□□□□ 0.3
MCF2L-203ENST00000375604 RTL4Q6ZR62 310 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 ZNF483Q8TF39 744 aaPredicted RBP16.93■□□□□ 0.3
MCF2L-203ENST00000375604 TDRD1Q9BXT4 1180 aaKnown RBP16.93■□□□□ 0.3
MCF2L-203ENST00000375604 SLC2A6Q9UGQ3 507 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 EOMESO95936 686 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 IL1R2P27930 398 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 CXXC5Q7LFL8 322 aaKnown RBP16.93■□□□□ 0.3
MCF2L-203ENST00000375604 OAFQ86UD1 273 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 RBM15BQ8NDT2 890 aaKnown RBP16.93■□□□□ 0.3
MCF2L-203ENST00000375604 LPGAT1Q92604 370 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 GINS4Q9BRT9 223 aa16.93■□□□□ 0.3
MCF2L-203ENST00000375604 NIPSNAP2O75323 286 aa16.92■□□□□ 0.3
MCF2L-203ENST00000375604 CREB1P16220 341 aa16.92■□□□□ 0.3
MCF2L-203ENST00000375604 ACAP2Q15057 778 aa16.92■□□□□ 0.3
MCF2L-203ENST00000375604 TAF1AQ15573 450 aaPredicted RBP16.92■□□□□ 0.3
MCF2L-203ENST00000375604 CARD16Q5EG05 197 aa16.92■□□□□ 0.3
MCF2L-203ENST00000375604 PHF19Q5T6S3 580 aa16.92■□□□□ 0.3
MCF2L-203ENST00000375604 TTC23Q5W5X9 447 aa16.92■□□□□ 0.3
MCF2L-203ENST00000375604 Q6ZVU0 165 aa16.92■□□□□ 0.3
MCF2L-203ENST00000375604 TMPRSS9Q7Z410 1059 aa16.92■□□□□ 0.3
MCF2L-203ENST00000375604 RASGRP3Q8IV61 690 aa16.92■□□□□ 0.3
MCF2L-203ENST00000375604 TTC29Q8NA56 475 aaPredicted RBP16.92■□□□□ 0.3
MCF2L-203ENST00000375604 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.92■□□□□ 0.3
MCF2L-203ENST00000375604 LTN1O94822 1766 aa16.92■□□□□ 0.3
MCF2L-203ENST00000375604 DBIP07108 87 aaKnown RBP16.92■□□□□ 0.3
MCF2L-203ENST00000375604 L1CAMP32004 1257 aa16.92■□□□□ 0.3
MCF2L-203ENST00000375604 UAP1L1Q3KQV9 507 aa16.92■□□□□ 0.3
MCF2L-203ENST00000375604 FRRS1Q6ZNA5 592 aa16.92■□□□□ 0.3
MCF2L-203ENST00000375604 AADATQ8N5Z0 425 aa16.92■□□□□ 0.3
MCF2L-203ENST00000375604 METTL27Q8N6F8 245 aaPredicted RBP16.92■□□□□ 0.3
MCF2L-203ENST00000375604 NAXEQ8NCW5 288 aa16.92■□□□□ 0.3
MCF2L-203ENST00000375604 JPH3Q8WXH2 748 aaPredicted RBP16.92■□□□□ 0.3
MCF2L-203ENST00000375604 IL18Q14116 193 aa16.92■□□□□ 0.3
MCF2L-203ENST00000375604 SMYD5Q6GMV2 418 aa16.92■□□□□ 0.3
MCF2L-203ENST00000375604 MAGEH1Q9H213 219 aa16.92■□□□□ 0.3
MCF2L-203ENST00000375604 TMEM27Q9HBJ8 222 aa16.92■□□□□ 0.3
MCF2L-203ENST00000375604 GABRQQ9UN88 632 aa16.92■□□□□ 0.3
MCF2L-203ENST00000375604 NCBP2P52298 156 aaKnown RBP eCLIP16.92■□□□□ 0.3
MCF2L-203ENST00000375604 DRG2P55039 364 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms