RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 HSD17B8Q92506 261 aa8.9□□□□□ -0.99
UBR4-201ENST00000375218 RAB3IPQ96QF0 476 aaPredicted RBP8.9□□□□□ -0.99
UBR4-201ENST00000375218 VRK1Q99986 396 aaPredicted RBP8.9□□□□□ -0.99
UBR4-201ENST00000375218 TMEM47Q9BQJ4 181 aa8.9□□□□□ -0.99
UBR4-201ENST00000375218 PDCD2LQ9BRP1 358 aa8.9□□□□□ -0.99
UBR4-201ENST00000375218 P2RY12Q9H244 342 aa8.9□□□□□ -0.99
UBR4-201ENST00000375218 SLC32A1Q9H598 525 aa8.9□□□□□ -0.99
UBR4-201ENST00000375218 PTGFRNQ9P2B2 879 aa8.9□□□□□ -0.99
UBR4-201ENST00000375218 LPAR3Q9UBY5 353 aa8.9□□□□□ -0.99
UBR4-201ENST00000375218 NR2E1Q9Y466 385 aa8.9□□□□□ -0.99
UBR4-201ENST00000375218 ASTN1O14525 1302 aa8.9□□□□□ -0.99
UBR4-201ENST00000375218 A0A0U1RQJ8 604 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 SLC22A31A6NKX4 558 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 C2orf74A8MZ97 194 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 PEX10O60683 326 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 DLGAP3O95886 979 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 MMP1P03956 469 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 ITGA2BP08514 1039 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 FOSL2P15408 326 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 HK1P19367 917 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 GRIA4P48058 902 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 SUMO3P55854 103 aaPredicted RBP8.89□□□□□ -0.99
UBR4-201ENST00000375218 IFI16Q16666 785 aaKnown RBP8.89□□□□□ -0.99
UBR4-201ENST00000375218 FASTKD1Q53R41 847 aaKnown RBP8.89□□□□□ -0.99
UBR4-201ENST00000375218 C9orf152Q5JTZ5 239 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 CPEB3Q8NE35 698 aaKnown RBP8.89□□□□□ -0.99
UBR4-201ENST00000375218 NANPQ8TBE9 248 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 LARP4BQ92615 738 aaKnown RBP8.89□□□□□ -0.99
UBR4-201ENST00000375218 MCRS1Q96EZ8 462 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 SUSD3Q96L08 255 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 CCDC17Q96LX7 622 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 PCYT2Q99447 389 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 ABHD16BQ9H3Z7 469 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 ECT2Q9H8V3 914 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 AAR2Q9Y312 384 aaKnown RBP8.89□□□□□ -0.99
UBR4-201ENST00000375218 A0A0A6YYJ9 748 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 SLCO1B7G3V0H7 640 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 MAP2K7O14733 419 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 TERTO14746 1132 aaKnown RBP8.89□□□□□ -0.99
UBR4-201ENST00000375218 ALOX15BO15296 676 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 MATN4O95460 622 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 DBTP11182 482 aaKnown RBP8.89□□□□□ -0.99
UBR4-201ENST00000375218 RPA2P15927 270 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 REEP5Q00765 189 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 LRRC63Q05C16 580 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 MPP2Q14168 576 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 DCST1Q5T197 706 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 ZSCAN25Q6NSZ9 544 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 TRPM8Q7Z2W7 1104 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 TOP6BLQ8N6T0 577 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 SLC9A7Q96T83 725 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 APOL2Q9BQE5 337 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.89□□□□□ -0.99
UBR4-201ENST00000375218 FBXO34Q9NWN3 711 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.89□□□□□ -0.99
UBR4-201ENST00000375218 PIPSLA2A3N6 862 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 TM9SF1O15321 606 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 LCP1P13796 627 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 NQO2P16083 231 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 FUT1P19526 365 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 DLSTP36957 453 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 CDH6P55285 790 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 RPS16P62249 146 aaKnown RBP8.89□□□□□ -0.99
UBR4-201ENST00000375218 EFHC2Q5JST6 749 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 PHYHD1Q5SRE7 291 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 KRT40Q6A162 431 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 FOXR1Q6PIV2 292 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 USP53Q70EK8 1073 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 GPR137CQ8N3F9 429 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 NHLRC2Q8NBF2 726 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 DVL3Q92997 716 aaPredicted RBP8.89□□□□□ -0.99
UBR4-201ENST00000375218 FBXL18Q96ME1 805 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 ACBD6Q9BR61 282 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 SLC4A5Q9BY07 1137 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 NKIRAS1Q9NYS0 192 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 LIMA1Q9UHB6 759 aaKnown RBP8.89□□□□□ -0.99
UBR4-201ENST00000375218 TMEM114B3SHH9 223 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 AGPSO00116 658 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 HRKO00198 91 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 RPP40O75818 363 aaKnown RBP8.89□□□□□ -0.99
UBR4-201ENST00000375218 YES1P07947 543 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 ERCC2P18074 760 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 DDCP20711 480 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 LSSP48449 732 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 STAT2P52630 851 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 SUCLG1P53597 346 aaKnown RBP8.89□□□□□ -0.99
UBR4-201ENST00000375218 PTPN11Q06124 597 aaPredicted RBP8.89□□□□□ -0.99
UBR4-201ENST00000375218 XKR4Q5GH76 650 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 KIAA1841Q6NSI8 718 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 FRA10AC1Q70Z53 315 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 TRMT11Q7Z4G4 463 aaKnown RBP8.89□□□□□ -0.99
UBR4-201ENST00000375218 CCNJLQ8IV13 435 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 UBQLNLQ8IYU4 475 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 C1orf127Q8N9H9 656 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 PCDH19Q8TAB3 1148 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 NDNFQ8TB73 568 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 RPF1Q9H9Y2 349 aaKnown RBP8.89□□□□□ -0.99
UBR4-201ENST00000375218 MTCH1Q9NZJ7 389 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 PADI2Q9Y2J8 665 aa8.89□□□□□ -0.99
UBR4-201ENST00000375218 SYNGAP1Q96PV0 1343 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms