RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 GPX3P22352 226 aa17.68■□□□□ 0.42
HLA-DQB1-201ENST00000374943 GCKP35557 465 aa17.68■□□□□ 0.42
HLA-DQB1-201ENST00000374943 ERVPABLB-1P60509 514 aa17.68■□□□□ 0.42
HLA-DQB1-201ENST00000374943 SP140Q13342 867 aa17.68■□□□□ 0.42
HLA-DQB1-201ENST00000374943 RCN1Q15293 331 aa17.68■□□□□ 0.42
HLA-DQB1-201ENST00000374943 GSTA3Q16772 222 aa17.68■□□□□ 0.42
HLA-DQB1-201ENST00000374943 PREPLQ4J6C6 727 aaPredicted RBP17.68■□□□□ 0.42
HLA-DQB1-201ENST00000374943 AGKQ53H12 422 aa17.68■□□□□ 0.42
HLA-DQB1-201ENST00000374943 LDLRAP1Q5SW96 308 aa17.68■□□□□ 0.42
HLA-DQB1-201ENST00000374943 ANKRD54Q6NXT1 300 aa17.68■□□□□ 0.42
HLA-DQB1-201ENST00000374943 SYCE2Q6PIF2 218 aa17.68■□□□□ 0.42
HLA-DQB1-201ENST00000374943 NEK10Q6ZWH5 1172 aa17.68■□□□□ 0.42
HLA-DQB1-201ENST00000374943 CYP2U1Q7Z449 544 aa17.68■□□□□ 0.42
HLA-DQB1-201ENST00000374943 SPATA19Q7Z5L4 167 aa17.68■□□□□ 0.42
HLA-DQB1-201ENST00000374943 OR52B6Q8NGF0 335 aa17.68■□□□□ 0.42
HLA-DQB1-201ENST00000374943 TUBGCP3Q96CW5 907 aa17.68■□□□□ 0.42
HLA-DQB1-201ENST00000374943 SERPINI1Q99574 410 aa17.68■□□□□ 0.42
HLA-DQB1-201ENST00000374943 TMEM79Q9BSE2 394 aa17.68■□□□□ 0.42
HLA-DQB1-201ENST00000374943 CD244Q9BZW8 370 aa17.68■□□□□ 0.42
HLA-DQB1-201ENST00000374943 ABCG8Q9H221 673 aa17.68■□□□□ 0.42
HLA-DQB1-201ENST00000374943 NOL11Q9H8H0 719 aaKnown RBP17.68■□□□□ 0.42
HLA-DQB1-201ENST00000374943 SARDHQ9UL12 918 aa17.68■□□□□ 0.42
HLA-DQB1-201ENST00000374943 BTRCQ9Y297 605 aa17.68■□□□□ 0.42
HLA-DQB1-201ENST00000374943 TIMM22Q9Y584 194 aa17.68■□□□□ 0.42
HLA-DQB1-201ENST00000374943 H0Y3Z8 333 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 KPNA3O00505 521 aaPredicted RBP17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 SLC16A5O15375 505 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 SPINT1O43278 529 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 SGTAO43765 313 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 OR4F21O95013 312 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 MATN4O95460 622 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 ANP32DO95626 131 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 OTCP00480 354 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 SNRPB2P08579 225 aaKnown RBP17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 LINC00032P0C843 101 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 OPRD1P41143 372 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 ELP6Q0PNE2 266 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 TRAF3Q13114 568 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 ART3Q13508 389 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 GRB7Q14451 532 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 ZNF234Q14588 700 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 C18orf21Q32NC0 220 aaPredicted RBP17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 LETMD1Q6P1Q0 360 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 BNC2Q6ZN30 1099 aaPredicted RBP17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 RNF165Q6ZSG1 346 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 BTN2A2Q8WVV5 523 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 JADE3Q92613 823 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 COQ10AQ96MF6 247 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 EGFL8Q99944 293 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 APOL5Q9BWW9 433 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 MRPL1Q9BYD6 325 aaKnown RBP17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 IGFLR1Q9H665 355 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 WDR41Q9HAD4 459 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 WWOXQ9NZC7 414 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 STOML1Q9UBI4 398 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 MBD1Q9UIS9 605 aaPredicted RBP17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 FKBP6O75344 327 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 PDE5AO76074 875 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 FTH1P02794 183 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 IDO1P14902 403 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 MSH3P20585 1137 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 EIF2DP41214 584 aaKnown RBP17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 HSPA7P48741 367 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 GRIK2Q13002 908 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 RUNX3Q13761 415 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 GRIN2CQ14957 1233 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 AAGABQ6PD74 315 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 HACD2Q6Y1H2 254 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 ZNF765Q7L2R6 523 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 TCAIMQ8N3R3 496 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 PIP4K2CQ8TBX8 421 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 UCMAQ8WVF2 138 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 ARRDC3Q96B67 414 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 DTD2Q96FN9 168 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 ANKRD27Q96NW4 1050 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 SLC12A9Q9BXP2 914 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 SLC28A3Q9HAS3 691 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 SDR39U1Q9NRG7 319 aaPredicted RBP17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 RIC8BQ9NVN3 520 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 CCDC167Q9P0B6 97 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 OPTCQ9UBM4 332 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 POMPQ9Y244 141 aa17.67■□□□□ 0.42
HLA-DQB1-201ENST00000374943 BBIP1A8MTZ0 92 aa17.66■□□□□ 0.42
HLA-DQB1-201ENST00000374943 K7EPI3 171 aa17.66■□□□□ 0.42
HLA-DQB1-201ENST00000374943 WNT9AO14904 365 aa17.66■□□□□ 0.42
HLA-DQB1-201ENST00000374943 AREL1O15033 823 aa17.66■□□□□ 0.42
HLA-DQB1-201ENST00000374943 GUCA1CO95843 209 aa17.66■□□□□ 0.42
HLA-DQB1-201ENST00000374943 HLA-EP13747 358 aa17.66■□□□□ 0.42
HLA-DQB1-201ENST00000374943 HGFP14210 728 aa17.66■□□□□ 0.42
HLA-DQB1-201ENST00000374943 GGT5P36269 586 aa17.66■□□□□ 0.42
HLA-DQB1-201ENST00000374943 PIK3CGP48736 1102 aa17.66■□□□□ 0.42
HLA-DQB1-201ENST00000374943 HYAL1Q12794 435 aa17.66■□□□□ 0.42
HLA-DQB1-201ENST00000374943 LRP8Q14114 963 aa17.66■□□□□ 0.42
HLA-DQB1-201ENST00000374943 POM121L1PQ3SYA9 428 aa17.66■□□□□ 0.42
HLA-DQB1-201ENST00000374943 PIGGQ5H8A4 983 aa17.66■□□□□ 0.42
HLA-DQB1-201ENST00000374943 SWT1Q5T5J6 900 aaKnown RBP17.66■□□□□ 0.42
HLA-DQB1-201ENST00000374943 REP15Q6BDI9 236 aa17.66■□□□□ 0.42
HLA-DQB1-201ENST00000374943 DET1Q7L5Y6 550 aa17.66■□□□□ 0.42
HLA-DQB1-201ENST00000374943 HPS6Q86YV9 775 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms