RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 CNPY1Q3B7I2 92 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 RUNDC3AQ59EK9 446 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 CRYBG2Q8N1P7 616 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 CRYGNQ8WXF5 182 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 TOP1MTQ969P6 601 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 KAT8Q9H7Z6 458 aaKnown RBP12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 MAP10Q9P2G4 905 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 GTPBP1O00178 669 aaKnown RBP12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 ERN1O75460 977 aaKnown RBP12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 FESP07332 822 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 SLC10A3P09131 477 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 ATF6P18850 670 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 NR4A1P22736 598 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 SCNN1AP37088 669 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 TIGD5Q53EQ6 642 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 BEND5Q7L4P6 421 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 CHST15Q7LFX5 561 aaPredicted RBP12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 PIGWQ7Z7B1 504 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 NDRG1Q92597 394 aaKnown RBP12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 C12orf65Q9H3J6 166 aaKnown RBP12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 GULP1Q9UBP9 304 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 WASF2Q9Y6W5 498 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 NHSQ6T4R5 1651 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 TNRC6CQ9HCJ0 1690 aaKnown RBP12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 FPGTO14772 594 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 NDUFS2O75306 463 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 PKMP14618 531 aaKnown RBP12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 YBEYP58557 167 aaPredicted RBP12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 TUBA4AP68366 448 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 FASTKD3Q14CZ7 662 aaKnown RBP12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 PPM1JQ5JR12 505 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 ZNF697Q5TEC3 545 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 THOC7Q6I9Y2 204 aaKnown RBP12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 ZNF730Q6ZMV8 503 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 CXorf40BQ96DE9 158 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 CKLFQ9UBR5 152 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 PCDHB1Q9Y5F3 818 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 TCRBV7S2A1N4TA0A589 114 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 TBC1D3BA6NDS4 549 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 PLIN3O60664 434 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 GCNT6Q5T4J0 391 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 CHSY3Q70JA7 882 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 NIPA2Q8N8Q9 360 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 RERGQ96A58 199 aaPredicted RBP12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 SGK2Q9HBY8 427 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 TBC1D24Q9ULP9 559 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 MAN2B2Q9Y2E5 1009 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 LAMB2P55268 1798 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 DLEC1Q9Y238 1755 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 MCIDASD6RGH6 385 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 ADAMDEC1O15204 470 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 PRODHO43272 600 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 MT-ND1P03886 318 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 ECHS1P30084 290 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 TIE1P35590 1138 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 CDH4P55283 916 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 CYP4X1Q8N118 509 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 UBR7Q8N806 425 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 NETO2Q8NC67 525 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 BCO2Q9BYV7 579 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 POMPQ9Y244 141 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 PCDHB9Q9Y5E1 797 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 ORC5O43913 435 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 TPTEP56180 551 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 CXorf57Q6NSI4 855 aaKnown RBP12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 TCF25Q9BQ70 676 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 TTLL2Q9BWV7 592 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 BHLHE41Q9C0J9 482 aaPredicted RBP12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 MYH4Q9Y623 1939 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 PTPRJQ12913 1337 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 H6PDO95479 791 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 IFNW1P05000 195 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 UROSP10746 265 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 CTSEP14091 401 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 CCND3P30281 292 aaPredicted RBP12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 IDH3AP50213 366 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 ARPC4P59998 168 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 GBE1Q04446 702 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 LCP2Q13094 533 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 TOMM20Q15388 145 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 IL23RQ5VWK5 629 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 LAPTM4BQ86VI4 370 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 CLIP3Q96DZ5 547 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 MCMBPQ9BTE3 642 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 KIAA1522Q9P206 1035 aaPredicted RBP12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 SUCOQ9UBS9 1254 aaKnown RBP12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 PPIEQ9UNP9 301 aaKnown RBP12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 TIMM22Q9Y584 194 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 MAGEB3O15480 346 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 MFSD11O43934 449 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 TOP3BO95985 862 aaKnown RBP12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 SLC35G4P0C7Q5 338 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 ZBTB6Q15916 424 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 RALGPS1Q5JS13 557 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 GPR158Q5T848 1215 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 PLPP4Q5VZY2 271 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 CLEC6AQ6EIG7 209 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 MINDY2Q8NBR6 621 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 TNFAIP8L1Q8WVP5 186 aa12.12□□□□□ -0.47
NPLOC4-202ENST00000374747 KLHL5Q96PQ7 755 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms