RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 ELMO1Q92556 727 aa11.14□□□□□ -0.63
HSPG2-202ENST00000374676 CYTH2Q99418 400 aa11.14□□□□□ -0.63
HSPG2-202ENST00000374676 MCMBPQ9BTE3 642 aa11.14□□□□□ -0.63
HSPG2-202ENST00000374676 AARSD1Q9BTE6 412 aaKnown RBP11.14□□□□□ -0.63
HSPG2-202ENST00000374676 CCDC68Q9H2F9 335 aa11.14□□□□□ -0.63
HSPG2-202ENST00000374676 RRAGDQ9NQL2 400 aaPredicted RBP11.14□□□□□ -0.63
HSPG2-202ENST00000374676 PADI4Q9UM07 663 aa11.14□□□□□ -0.63
HSPG2-202ENST00000374676 CACNA1AO00555 2505 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 EME2A4GXA9 379 aaPredicted RBP11.13□□□□□ -0.63
HSPG2-202ENST00000374676 IQCF5A8MTL0 148 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 PDZK1P1A8MUH7 402 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 CXorf49A8MYA2 514 aaPredicted RBP11.13□□□□□ -0.63
HSPG2-202ENST00000374676 B4DGG1 531 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 BRAFP15056 766 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 PNLIPP16233 465 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 CHRM3P20309 590 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 ACP1P24666 158 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 RPL10P27635 214 aaKnown RBP11.13□□□□□ -0.63
HSPG2-202ENST00000374676 CCR7P32248 378 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 HALP42357 657 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 FASLGP48023 281 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 PMS2P54278 862 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 CSE1LP55060 971 aaKnown RBP11.13□□□□□ -0.63
HSPG2-202ENST00000374676 VSNL1P62760 191 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 DAB2P98082 770 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 PUM1Q14671 1186 aaKnown RBP eCLIP11.13□□□□□ -0.63
HSPG2-202ENST00000374676 NR0B2Q15466 257 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 KBTBD12Q3ZCT8 623 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 PLEKHS1Q5SXH7 462 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 CAPRIN2Q6IMN6 1127 aaKnown RBP11.13□□□□□ -0.63
HSPG2-202ENST00000374676 STRA8Q7Z7C7 330 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 SLC9B2Q86UD5 537 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 SFTPA2Q8IWL1 248 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 KRT222Q8N1A0 295 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 LILRA3Q8N6C8 439 aaPredicted RBP11.13□□□□□ -0.63
HSPG2-202ENST00000374676 KYQ8NBH2 561 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 LKAAEAR1Q8TD35 194 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 KCNJ9Q92806 393 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 NAT6Q93015 286 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 CPNE1Q99829 537 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 OR52A5Q9H2C5 316 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 ACSS3Q9H6R3 686 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 SARS2Q9NP81 518 aaKnown RBP11.13□□□□□ -0.63
HSPG2-202ENST00000374676 SCHIP1Q9P0W5 487 aaPredicted RBP11.13□□□□□ -0.63
HSPG2-202ENST00000374676 SIRPGQ9P1W8 387 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 SLC17A6Q9P2U8 582 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.13□□□□□ -0.63
HSPG2-202ENST00000374676 RABGEF1Q9UJ41 708 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 WDR37Q9Y2I8 494 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 MED16Q9Y2X0 877 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 PSAT1Q9Y617 370 aa11.13□□□□□ -0.63
HSPG2-202ENST00000374676 V9GYY5 206 aaPredicted RBP11.13□□□□□ -0.63
HSPG2-202ENST00000374676 ANKRD12Q6UB98 2062 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 NUDT21O43809 227 aaKnown RBP11.12□□□□□ -0.63
HSPG2-202ENST00000374676 NIPSNAP2O75323 286 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 SLCO2B1O94956 709 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 KCNK5O95279 499 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 ACSL3O95573 720 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 APOA4P06727 396 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 GP1BAP07359 652 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 F7P08709 466 aaPredicted RBP11.12□□□□□ -0.63
HSPG2-202ENST00000374676 ABHD2P08910 425 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 GLB1P16278 677 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 ITGB6P18564 788 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 PDHA2P29803 388 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 SLC19A1P41440 591 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 SKIV2L2P42285 1042 aaKnown RBP11.12□□□□□ -0.63
HSPG2-202ENST00000374676 CLCN7P51798 805 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 UBE2IP63279 158 aaKnown RBP11.12□□□□□ -0.63
HSPG2-202ENST00000374676 ILKQ13418 452 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 CLCA4Q14CN2 919 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 TMED2Q15363 201 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 RPE65Q16518 533 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.12□□□□□ -0.63
HSPG2-202ENST00000374676 GRTP1Q5TC63 336 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 OTOAQ7RTW8 1153 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 ZC3HC1Q86WB0 502 aaKnown RBP11.12□□□□□ -0.63
HSPG2-202ENST00000374676 CTAGE3PQ8IX95 158 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 SLC22A15Q8IZD6 547 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 PPM1NQ8N819 430 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 MAPK15Q8TD08 544 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 SLC37A2Q8TED4 501 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 ZFPM2Q8WW38 1151 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 PATE1Q8WXA2 126 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 INPP5DQ92835 1189 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 TMEM159Q96B96 161 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 INSM2Q96T92 566 aaPredicted RBP11.12□□□□□ -0.63
HSPG2-202ENST00000374676 PARD6BQ9BYG5 372 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 WWP1Q9H0M0 922 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 RHOJQ9H4E5 214 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 UCK1Q9HA47 277 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 ZNF624Q9P2J8 865 aaPredicted RBP11.12□□□□□ -0.63
HSPG2-202ENST00000374676 CPNE7Q9UBL6 633 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 FAM8A1Q9UBU6 413 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 RAB21Q9UL25 225 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 CDYLQ9Y232 598 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 VWA7Q9Y334 891 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 DHRS7Q9Y394 339 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 PCDHGA1Q9Y5H4 931 aa11.12□□□□□ -0.63
HSPG2-202ENST00000374676 TRBV23OR9-2A0A075B6M9 112 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms