RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 FIBCD1Q8N539 461 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 DCAF4L2Q8NA75 395 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 PDPRQ8NCN5 879 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 ZFP28Q8NHY6 868 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 GRIN3AQ8TCU5 1115 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 HIC2Q96JB3 615 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 PPP3R2Q96LZ3 170 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 ADI1Q9BV57 179 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 HERC2P3Q9BVR0 1158 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 YTHDF1Q9BYJ9 559 aaKnown RBP13.74□□□□□ -0.21
HMGCL-203ENST00000374490 CLPBQ9H078 707 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 CAAP1Q9H8G2 361 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 RC3H2Q9HBD1 1191 aaKnown RBP13.74□□□□□ -0.21
HMGCL-203ENST00000374490 TIMMDC1Q9NPL8 285 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 OLAHQ9NV23 265 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 SPG21Q9NZD8 308 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 GMPR2Q9P2T1 348 aaKnown RBP13.74□□□□□ -0.21
HMGCL-203ENST00000374490 RSL24D1Q9UHA3 163 aaKnown RBP13.74□□□□□ -0.21
HMGCL-203ENST00000374490 AP3M1Q9Y2T2 418 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 PCDHB3Q9Y5E6 796 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 TTC28Q96AY4 2481 aa13.73□□□□□ -0.21
HMGCL-203ENST00000374490 RNF103-CHMP3A0A140T963 221 aa13.73□□□□□ -0.21
HMGCL-203ENST00000374490 ASPDHA6ND91 283 aa13.73□□□□□ -0.21
HMGCL-203ENST00000374490 TRIM64CA6NLI5 447 aa13.73□□□□□ -0.21
HMGCL-203ENST00000374490 H0Y626 953 aa13.73□□□□□ -0.21
HMGCL-203ENST00000374490 CLGNO14967 610 aa13.73□□□□□ -0.21
HMGCL-203ENST00000374490 INPP4BO15327 924 aa13.73□□□□□ -0.21
HMGCL-203ENST00000374490 TSPAN3O60637 253 aa13.73□□□□□ -0.21
HMGCL-203ENST00000374490 SNAP91O60641 907 aa13.73□□□□□ -0.21
HMGCL-203ENST00000374490 TULP3O75386 442 aa13.73□□□□□ -0.21
HMGCL-203ENST00000374490 CD160O95971 181 aa13.73□□□□□ -0.21
HMGCL-203ENST00000374490 LDLRP01130 860 aa13.73□□□□□ -0.21
HMGCL-203ENST00000374490 RPL17P18621 184 aaKnown RBP13.73□□□□□ -0.21
HMGCL-203ENST00000374490 PRDX3P30048 256 aaKnown RBP13.73□□□□□ -0.21
HMGCL-203ENST00000374490 PPM1AP35813 382 aa13.73□□□□□ -0.21
HMGCL-203ENST00000374490 ESRRGP62508 458 aa13.73□□□□□ -0.21
HMGCL-203ENST00000374490 MERTKQ12866 999 aa13.73□□□□□ -0.21
HMGCL-203ENST00000374490 PTRHD1Q6GMV3 140 aaKnown RBP13.73□□□□□ -0.21
HMGCL-203ENST00000374490 GOLGA7Q7Z5G4 137 aa13.73□□□□□ -0.21
HMGCL-203ENST00000374490 RBFAQ8N0V3 343 aa13.73□□□□□ -0.21
HMGCL-203ENST00000374490 CDYL2Q8N8U2 506 aa13.73□□□□□ -0.21
HMGCL-203ENST00000374490 OR2T11Q8NH01 316 aa13.73□□□□□ -0.21
HMGCL-203ENST00000374490 METTL6Q8TCB7 284 aa13.73□□□□□ -0.21
HMGCL-203ENST00000374490 POP5Q969H6 163 aaKnown RBP13.73□□□□□ -0.21
HMGCL-203ENST00000374490 PLEKHG4BQ96PX9 1271 aa13.73□□□□□ -0.21
HMGCL-203ENST00000374490 ZBTB18Q99592 522 aa13.73□□□□□ -0.21
HMGCL-203ENST00000374490 VN1R3Q9BXE9 311 aa13.73□□□□□ -0.21
HMGCL-203ENST00000374490 BPIFA1Q9NP55 256 aa13.73□□□□□ -0.21
HMGCL-203ENST00000374490 ST14Q9Y5Y6 855 aa13.73□□□□□ -0.21
HMGCL-203ENST00000374490 CEPT1Q9Y6K0 416 aa13.73□□□□□ -0.21
HMGCL-203ENST00000374490 AK5Q9Y6K8 562 aa13.73□□□□□ -0.21
HMGCL-203ENST00000374490 SLC28A1O00337 649 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 ADAM12O43184 909 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 TBL1XO60907 577 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 WDR47O94967 919 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 PGLSO95336 258 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 ASLP04424 464 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 PCSK2P16519 638 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 ITGALP20701 1170 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 JAK1P23458 1154 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 DGKAP23743 735 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 HMOX2P30519 316 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 CSNK1DP48730 415 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 CDK9P50750 372 aaKnown RBP13.72□□□□□ -0.21
HMGCL-203ENST00000374490 ERVPABLB-1P60509 514 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 TWF1Q12792 350 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 GTF2H2Q13888 395 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 TIGD2Q4W5G0 525 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 PAGE3Q5JUK9 113 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 FAM219BQ5XKK7 198 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 GTF2H2CQ6P1K8 395 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 TTC23LQ6PF05 361 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 TTC33Q6PID6 262 aaPredicted RBP13.72□□□□□ -0.21
HMGCL-203ENST00000374490 METTL3Q86U44 580 aaKnown RBP13.72□□□□□ -0.21
HMGCL-203ENST00000374490 EPHX4Q8IUS5 362 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 FAM47BQ8NA70 645 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 OR8J3Q8NGG0 315 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 DNAJB14Q8TBM8 379 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 UBTD2Q8WUN7 234 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 VPS33AQ96AX1 596 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 NSMCE2Q96MF7 247 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 C1orf50Q9BV19 199 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 FAM126AQ9BYI3 521 aaPredicted RBP13.72□□□□□ -0.21
HMGCL-203ENST00000374490 CERS4Q9HA82 394 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 SARS2Q9NP81 518 aaKnown RBP13.72□□□□□ -0.21
HMGCL-203ENST00000374490 OARD1Q9Y530 152 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 KIAA1671Q9BY89 1806 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 C9JVG2 144 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 ZNF701M0R085 212 aaPredicted RBP13.72□□□□□ -0.21
HMGCL-203ENST00000374490 RGS14O43566 566 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 GMNNO75496 209 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 CAPN1P07384 714 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 IRF1P10914 325 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 CDH1P12830 882 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 CDH2P19022 906 aaPredicted RBP13.72□□□□□ -0.21
HMGCL-203ENST00000374490 PIK3CGP48736 1102 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 PTPN5P54829 565 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 PWP1Q13610 501 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 NR6A1Q15406 480 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 SLC36A3Q495N2 470 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms