RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 LIPAP38571 399 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 SH3BP2P78314 561 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 POU4F1Q01851 419 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 BNC1Q01954 994 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 SLAMF1Q13291 335 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 CAPSQ13938 189 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 SYT16Q17RD7 645 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 GOLGA7BQ2TAP0 167 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 ZC3H12BQ5HYM0 836 aaKnown RBP12.74□□□□□ -0.37
PRPF4-201ENST00000374198 ZNF678Q5SXM1 525 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 KCTD20Q7Z5Y7 419 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 FAM86B1Q8N7N1 296 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 GALNT6Q8NCL4 622 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 SETD9Q8NE22 299 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 TUBGCP3Q96CW5 907 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 TMCO6Q96DC7 493 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 PDLIM5Q96HC4 596 aaKnown RBP12.74□□□□□ -0.37
PRPF4-201ENST00000374198 TEX37Q96LM6 180 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 ACAT2Q9BWD1 397 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 ITPAQ9BY32 194 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 MRPL4Q9BYD3 311 aaKnown RBP12.74□□□□□ -0.37
PRPF4-201ENST00000374198 PXMP2Q9NR77 195 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 SETD4Q9NVD3 440 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 CCDC59Q9P031 241 aaKnown RBP12.74□□□□□ -0.37
PRPF4-201ENST00000374198 LEF1Q9UJU2 399 aaPredicted RBP12.74□□□□□ -0.37
PRPF4-201ENST00000374198 THSD7BQ9C0I4 1608 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 LEUTXA8MZ59 168 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 PDPK1O15530 556 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 MSCO60682 206 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 ITGAMP11215 1152 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 SLC26A3P40879 764 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 MAGEA11P43364 429 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 DIO3P55073 304 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 OSTNP61366 133 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 PPP1R8Q12972 351 aaKnown RBP12.74□□□□□ -0.37
PRPF4-201ENST00000374198 FAM122CQ6P4D5 195 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 CPXCR1Q8N123 301 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 SETD6Q8TBK2 473 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 ISG20Q96AZ6 181 aaKnown RBP12.74□□□□□ -0.37
PRPF4-201ENST00000374198 L3HYPDHQ96EM0 354 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 APOL4Q9BPW4 351 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 CYP3A43Q9HB55 503 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 CCNB1IP1Q9NPC3 277 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 TMEFF2Q9UIK5 374 aaPredicted RBP12.74□□□□□ -0.37
PRPF4-201ENST00000374198 ORC6Q9Y5N6 252 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 LYVE1Q9Y5Y7 322 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 MRPS14O60783 128 aaKnown RBP12.73□□□□□ -0.37
PRPF4-201ENST00000374198 UGT2B17O75795 530 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 LTA4HP09960 611 aaKnown RBP12.73□□□□□ -0.37
PRPF4-201ENST00000374198 NOS2P35228 1153 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 RPS5P46782 204 aaKnown RBP12.73□□□□□ -0.37
PRPF4-201ENST00000374198 ZFP36L2P47974 494 aaKnown RBP12.73□□□□□ -0.37
PRPF4-201ENST00000374198 RFX2P48378 723 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 UGT2B15P54855 530 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 CDH13P55290 713 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 EIF2B5Q13144 721 aaKnown RBP12.73□□□□□ -0.37
PRPF4-201ENST00000374198 NKG7Q16617 165 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 RFX4Q33E94 735 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 UNC50Q53HI1 259 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 ARHGEF16Q5VV41 709 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 ABHD15Q6UXT9 468 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 CCDC190Q86UF4 302 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 C12orf29Q8N999 325 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 C1orf127Q8N9H9 656 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 DTX3Q8N9I9 347 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 C17orf62Q9BQA9 187 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 C1QTNF7Q9BXJ2 289 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 ERVK13-1Q9NX77 482 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 HOXC10Q9NYD6 342 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 AGO1Q9UL18 857 aaKnown RBP12.73□□□□□ -0.37
PRPF4-201ENST00000374198 RNF6Q9Y252 685 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 PCDHGB2Q9Y5G2 931 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 A0A0U1RQS6 177 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 ENPP3O14638 875 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 SLITRK5O94991 958 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 DNTTP04053 509 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 FGF4P08620 206 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 GADD45AP24522 165 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 CAP2P40123 477 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 DCTP40126 519 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 SLC1A2P43004 574 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 SREBF2Q12772 1141 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 CDH17Q12864 832 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 TOR2AQ5JU69 321 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 ENPP6Q6UWR7 440 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 DPY19L3Q6ZPD9 716 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 EFL1Q7Z2Z2 1120 aaKnown RBP12.73□□□□□ -0.37
PRPF4-201ENST00000374198 TMEM179BQ7Z7N9 219 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 EID3Q8N140 333 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 OR5K1Q8NHB7 308 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 CCDC120Q96HB5 630 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 CDHR1Q96JP9 859 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 JPH1Q9HDC5 661 aaPredicted RBP12.73□□□□□ -0.37
PRPF4-201ENST00000374198 NUFIP1Q9UHK0 495 aaKnown RBP12.73□□□□□ -0.37
PRPF4-201ENST00000374198 POLG2Q9UHN1 485 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 HCN4Q9Y3Q4 1203 aa12.73□□□□□ -0.37
PRPF4-201ENST00000374198 WDR81Q562E7 1941 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 PLK4O00444 970 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 ARHGEF9O43307 516 aa12.72□□□□□ -0.37
PRPF4-201ENST00000374198 CA12O43570 354 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms