RNA–Protein interactions for RNA: ENST00000373602.9

CCDC28B-201, Transcript of coiled-coil domain containing 28B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-201ENST00000373602 OR5K3A6NET4 321 aa21.19■□□□□ 0.98
CCDC28B-201ENST00000373602 ERI2A8K979 691 aaKnown RBP21.19■□□□□ 0.98
CCDC28B-201ENST00000373602 ARHGAP6O43182 974 aa21.19■□□□□ 0.98
CCDC28B-201ENST00000373602 POLBP06746 335 aa21.19■□□□□ 0.98
CCDC28B-201ENST00000373602 SLC35G4P0C7Q5 338 aa21.19■□□□□ 0.98
CCDC28B-201ENST00000373602 NELFEP18615 380 aaKnown RBP21.19■□□□□ 0.98
CCDC28B-201ENST00000373602 PSMA3P25788 255 aa21.19■□□□□ 0.98
CCDC28B-201ENST00000373602 ACRV1P26436 265 aa21.19■□□□□ 0.98
CCDC28B-201ENST00000373602 ABHD18Q0P651 414 aa21.19■□□□□ 0.98
CCDC28B-201ENST00000373602 SEPT6Q14141 434 aa21.19■□□□□ 0.98
CCDC28B-201ENST00000373602 ZRANB3Q5FWF4 1079 aa21.19■□□□□ 0.98
CCDC28B-201ENST00000373602 DUS1LQ6P1R4 473 aaKnown RBP21.19■□□□□ 0.98
CCDC28B-201ENST00000373602 MICALCLQ6ZW33 695 aa21.19■□□□□ 0.98
CCDC28B-201ENST00000373602 LINC00523Q86TU6 105 aa21.19■□□□□ 0.98
CCDC28B-201ENST00000373602 SERPINA9Q86WD7 417 aa21.19■□□□□ 0.98
CCDC28B-201ENST00000373602 UBXN4Q92575 508 aa21.19■□□□□ 0.98
CCDC28B-201ENST00000373602 SLC45A3Q96JT2 553 aa21.19■□□□□ 0.98
CCDC28B-201ENST00000373602 ARHGAP9Q9BRR9 750 aa21.19■□□□□ 0.98
CCDC28B-201ENST00000373602 EFHD1Q9BUP0 239 aa21.19■□□□□ 0.98
CCDC28B-201ENST00000373602 KIR3DX1Q9H7L2 352 aa21.19■□□□□ 0.98
CCDC28B-201ENST00000373602 GPN2Q9H9Y4 310 aaPredicted RBP21.19■□□□□ 0.98
CCDC28B-201ENST00000373602 PIH1D1Q9NWS0 290 aaKnown RBP21.19■□□□□ 0.98
CCDC28B-201ENST00000373602 MROH6A6NGR9 719 aa21.18■□□□□ 0.98
CCDC28B-201ENST00000373602 ZNF891A8MT65 544 aaPredicted RBP21.18■□□□□ 0.98
CCDC28B-201ENST00000373602 PRSS56P0CW18 603 aa21.18■□□□□ 0.98
CCDC28B-201ENST00000373602 FGF5P12034 268 aa21.18■□□□□ 0.98
CCDC28B-201ENST00000373602 PLA2G2AP14555 144 aa21.18■□□□□ 0.98
CCDC28B-201ENST00000373602 CACNG1Q06432 222 aa21.18■□□□□ 0.98
CCDC28B-201ENST00000373602 ESX1Q8N693 406 aa21.18■□□□□ 0.98
CCDC28B-201ENST00000373602 KIAA1143Q96AT1 154 aaPredicted RBP21.18■□□□□ 0.98
CCDC28B-201ENST00000373602 SLC41A2Q96JW4 573 aa21.18■□□□□ 0.98
CCDC28B-201ENST00000373602 ULBP3Q9BZM4 244 aa21.18■□□□□ 0.98
CCDC28B-201ENST00000373602 ETNK1Q9HBU6 452 aa21.18■□□□□ 0.98
CCDC28B-201ENST00000373602 SLC24A2Q9UI40 661 aa21.18■□□□□ 0.98
CCDC28B-201ENST00000373602 IGHV5-51A0A0C4DH38 117 aa21.17■□□□□ 0.98
CCDC28B-201ENST00000373602 B8ZZF3 427 aa21.17■□□□□ 0.98
CCDC28B-201ENST00000373602 ZNF28P17035 718 aa21.17■□□□□ 0.98
CCDC28B-201ENST00000373602 FDFT1P37268 417 aa21.17■□□□□ 0.98
CCDC28B-201ENST00000373602 GSE1Q14687 1217 aa21.17■□□□□ 0.98
CCDC28B-201ENST00000373602 ZNF658BQ4V348 819 aaPredicted RBP21.17■□□□□ 0.98
CCDC28B-201ENST00000373602 MEI1Q5TIA1 1274 aa21.17■□□□□ 0.98
CCDC28B-201ENST00000373602 TAS2R42Q7RTR8 314 aa21.17■□□□□ 0.98
CCDC28B-201ENST00000373602 PIANPQ8IYJ0 282 aa21.17■□□□□ 0.98
CCDC28B-201ENST00000373602 UNC5BQ8IZJ1 945 aa21.17■□□□□ 0.98
CCDC28B-201ENST00000373602 OR52K1Q8NGK4 314 aa21.17■□□□□ 0.98
CCDC28B-201ENST00000373602 C1orf54Q8WWF1 131 aa21.17■□□□□ 0.98
CCDC28B-201ENST00000373602 CD180Q99467 661 aa21.17■□□□□ 0.98
CCDC28B-201ENST00000373602 MAP3K3Q99759 626 aa21.17■□□□□ 0.98
CCDC28B-201ENST00000373602 COG4Q9H9E3 785 aa21.17■□□□□ 0.98
CCDC28B-201ENST00000373602 HRASLS2Q9NWW9 162 aa21.17■□□□□ 0.98
CCDC28B-201ENST00000373602 HEBP2Q9Y5Z4 205 aa21.17■□□□□ 0.98
CCDC28B-201ENST00000373602 COLEC10Q9Y6Z7 277 aa21.17■□□□□ 0.98
CCDC28B-201ENST00000373602 KALRNO60229 2985 aa21.17■□□□□ 0.98
CCDC28B-201ENST00000373602 GOLGA6L3A6NEY3 463 aa21.16■□□□□ 0.98
CCDC28B-201ENST00000373602 SUN1O94901 812 aa21.16■□□□□ 0.98
CCDC28B-201ENST00000373602 IFNB1P01574 187 aa21.16■□□□□ 0.98
CCDC28B-201ENST00000373602 NDUFS1P28331 727 aa21.16■□□□□ 0.98
CCDC28B-201ENST00000373602 STAT5AP42229 794 aa21.16■□□□□ 0.98
CCDC28B-201ENST00000373602 CDH17Q12864 832 aa21.16■□□□□ 0.98
CCDC28B-201ENST00000373602 RPS6KA1Q15418 735 aa21.16■□□□□ 0.98
CCDC28B-201ENST00000373602 DBN1Q16643 649 aa21.16■□□□□ 0.98
CCDC28B-201ENST00000373602 SKIDA1Q1XH10 827 aa21.16■□□□□ 0.98
CCDC28B-201ENST00000373602 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.16■□□□□ 0.98
CCDC28B-201ENST00000373602 DNTTIP2Q5QJE6 756 aaKnown RBP21.16■□□□□ 0.98
CCDC28B-201ENST00000373602 CYB5D1Q6P9G0 228 aa21.16■□□□□ 0.98
CCDC28B-201ENST00000373602 OOSP2Q86WS3 158 aa21.16■□□□□ 0.98
CCDC28B-201ENST00000373602 KMT5CQ86Y97 462 aa21.16■□□□□ 0.98
CCDC28B-201ENST00000373602 ALS2CR12Q96Q35 445 aa21.16■□□□□ 0.98
CCDC28B-201ENST00000373602 OR52A5Q9H2C5 316 aa21.16■□□□□ 0.98
CCDC28B-201ENST00000373602 VPS37BQ9H9H4 285 aa21.16■□□□□ 0.98
CCDC28B-201ENST00000373602 IL17BQ9UHF5 180 aa21.16■□□□□ 0.98
CCDC28B-201ENST00000373602 ZNF148Q9UQR1 794 aa21.16■□□□□ 0.98
CCDC28B-201ENST00000373602 TLCD2A6NGC4 264 aa21.15■□□□□ 0.98
CCDC28B-201ENST00000373602 SPAG6O75602 509 aa21.15■□□□□ 0.98
CCDC28B-201ENST00000373602 AP2A2O94973 939 aa21.15■□□□□ 0.98
CCDC28B-201ENST00000373602 FAM87AP0C7U9 286 aa21.15■□□□□ 0.98
CCDC28B-201ENST00000373602 C6orf15Q6UXA7 325 aaPredicted RBP21.15■□□□□ 0.98
CCDC28B-201ENST00000373602 ZNF662Q6ZS27 426 aa21.15■□□□□ 0.98
CCDC28B-201ENST00000373602 PPP1R3BQ86XI6 285 aa21.15■□□□□ 0.98
CCDC28B-201ENST00000373602 RASGRP3Q8IV61 690 aa21.15■□□□□ 0.98
CCDC28B-201ENST00000373602 CLDN19Q8N6F1 224 aa21.15■□□□□ 0.98
CCDC28B-201ENST00000373602 DNAAF3Q8N9W5 541 aa21.15■□□□□ 0.98
CCDC28B-201ENST00000373602 SIDT2Q8NBJ9 832 aaKnown RBP21.15■□□□□ 0.98
CCDC28B-201ENST00000373602 ELMO2Q96JJ3 720 aa21.15■□□□□ 0.98
CCDC28B-201ENST00000373602 RPS6KL1Q9Y6S9 549 aa21.15■□□□□ 0.98
CCDC28B-201ENST00000373602 UBA6A0AVT1 1052 aaPredicted RBP21.14■□□□□ 0.97
CCDC28B-201ENST00000373602 CCDC78A2IDD5 438 aa21.14■□□□□ 0.97
CCDC28B-201ENST00000373602 OR6C74A6NCV1 312 aa21.14■□□□□ 0.97
CCDC28B-201ENST00000373602 NKX2-8O15522 239 aa21.14■□□□□ 0.97
CCDC28B-201ENST00000373602 KIAA0754O94854 1291 aa21.14■□□□□ 0.97
CCDC28B-201ENST00000373602 GSTM1P09488 218 aa21.14■□□□□ 0.97
CCDC28B-201ENST00000373602 SFTPCP11686 197 aa21.14■□□□□ 0.97
CCDC28B-201ENST00000373602 FOLR1P15328 257 aa21.14■□□□□ 0.97
CCDC28B-201ENST00000373602 ITGB6P18564 788 aa21.14■□□□□ 0.97
CCDC28B-201ENST00000373602 MSNP26038 577 aaKnown RBP21.14■□□□□ 0.97
CCDC28B-201ENST00000373602 CD151P48509 253 aa21.14■□□□□ 0.97
CCDC28B-201ENST00000373602 GSTM4Q03013 218 aa21.14■□□□□ 0.97
CCDC28B-201ENST00000373602 RPA4Q13156 261 aa21.14■□□□□ 0.97
CCDC28B-201ENST00000373602 SEMA5AQ13591 1074 aa21.14■□□□□ 0.97
CCDC28B-201ENST00000373602 SNX1Q13596 522 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms