RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 CD244Q9BZW8 370 aa13.17□□□□□ -0.3
CSTF2-201ENST00000372972 PCDHAC1Q9H158 963 aa13.17□□□□□ -0.3
CSTF2-201ENST00000372972 SLC52A3Q9NQ40 469 aa13.17□□□□□ -0.3
CSTF2-201ENST00000372972 TMEM45AQ9NWC5 275 aa13.17□□□□□ -0.3
CSTF2-201ENST00000372972 MARK1Q9P0L2 795 aa13.17□□□□□ -0.3
CSTF2-201ENST00000372972 DPP7Q9UHL4 492 aa13.17□□□□□ -0.3
CSTF2-201ENST00000372972 SCN8AQ9UQD0 1980 aa13.17□□□□□ -0.3
CSTF2-201ENST00000372972 WNT6Q9Y6F9 365 aa13.17□□□□□ -0.3
CSTF2-201ENST00000372972 IGLV3-16A0A075B6K0 115 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 A0A1W2PP18 115 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 SYNCRIPO60506 623 aaKnown RBP13.16□□□□□ -0.3
CSTF2-201ENST00000372972 SLC22A3O75751 556 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 OR56A5P0C7T3 313 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 NNMTP40261 264 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 KCNK10P57789 538 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 B4GALNT1Q00973 533 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 RALGDSQ12967 914 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 ARHGEF7Q14155 803 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 CBX2Q14781 532 aaPredicted RBP13.16□□□□□ -0.3
CSTF2-201ENST00000372972 MAP7D1Q3KQU3 841 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 PDCD4Q53EL6 469 aaKnown RBP13.16□□□□□ -0.3
CSTF2-201ENST00000372972 IL27RAQ6UWB1 636 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 FNDC5Q8NAU1 212 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 UCMAQ8WVF2 138 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 RHBDF1Q96CC6 855 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 SPDL1Q96EA4 605 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 HEPHQ9BQS7 1158 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 SLC39A3Q9BRY0 314 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 WWOXQ9NZC7 414 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 PKD2L2Q9NZM6 624 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 OPTCQ9UBM4 332 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 ANGPTL3Q9Y5C1 460 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 PDE4DIPQ5VU43 2346 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 ATG2AQ2TAZ0 1938 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 PRSS51A0A1B0GVH4 220 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 EIF4E1BA6NMX2 242 aaKnown RBP13.16□□□□□ -0.3
CSTF2-201ENST00000372972 C9JVG2 144 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 EIF3FO00303 357 aaPredicted RBP13.16□□□□□ -0.3
CSTF2-201ENST00000372972 ZNF197O14709 1029 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 SLC9A3R1O14745 358 aaPredicted RBP13.16□□□□□ -0.3
CSTF2-201ENST00000372972 KATNA1O75449 491 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 C8BP07358 591 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 POU2F2P09086 479 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 CYP2A6P11509 494 aaPredicted RBP13.16□□□□□ -0.3
CSTF2-201ENST00000372972 ZNF30P17039 623 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 CCR7P32248 378 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 RHDQ02161 417 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 TRAF3Q13114 568 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 RCAN2Q14206 197 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 ADGRE1Q14246 886 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 GRAMD1BQ3KR37 738 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 LRRC73Q5JTD7 316 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 ITFG1Q8TB96 612 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 FRS2Q8WU20 508 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 MYLIPQ8WY64 445 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 GATA6Q92908 595 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 LRCH3Q96II8 777 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 ABCG8Q9H221 673 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 NKX2-4Q9H2Z4 354 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 YY1AP1Q9H869 796 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 COPS7BQ9H9Q2 264 aaPredicted RBP13.16□□□□□ -0.3
CSTF2-201ENST00000372972 IL1RL2Q9HB29 575 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 PIDD1Q9HB75 910 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 ZIM2Q9NZV7 527 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 RIMS3Q9UJD0 308 aa13.16□□□□□ -0.3
CSTF2-201ENST00000372972 MRPS23Q9Y3D9 190 aaKnown RBP13.16□□□□□ -0.3
CSTF2-201ENST00000372972 MYOFQ9NZM1 2061 aa13.15□□□□□ -0.3
CSTF2-201ENST00000372972 MAGEA13PA6NCF6 341 aa13.15□□□□□ -0.3
CSTF2-201ENST00000372972 SMNDC1O75940 238 aaKnown RBP eCLIP13.15□□□□□ -0.3
CSTF2-201ENST00000372972 STAMBPO95630 424 aa13.15□□□□□ -0.3
CSTF2-201ENST00000372972 HMOX2P30519 316 aa13.15□□□□□ -0.3
CSTF2-201ENST00000372972 NRIP1P48552 1158 aa13.15□□□□□ -0.3
CSTF2-201ENST00000372972 AQP4P55087 323 aa13.15□□□□□ -0.3
CSTF2-201ENST00000372972 UFM1P61960 85 aa13.15□□□□□ -0.3
CSTF2-201ENST00000372972 EMX2Q04743 252 aa13.15□□□□□ -0.3
CSTF2-201ENST00000372972 FOXM1Q08050 763 aa13.15□□□□□ -0.3
CSTF2-201ENST00000372972 CDKL4Q5MAI5 379 aa13.15□□□□□ -0.3
CSTF2-201ENST00000372972 RARS2Q5T160 578 aaKnown RBP13.15□□□□□ -0.3
CSTF2-201ENST00000372972 TMEM154Q6P9G4 183 aa13.15□□□□□ -0.3
CSTF2-201ENST00000372972 SFRP1Q8N474 314 aa13.15□□□□□ -0.3
CSTF2-201ENST00000372972 ICA1LQ8NDH6 482 aa13.15□□□□□ -0.3
CSTF2-201ENST00000372972 CATSPER1Q8NEC5 780 aa13.15□□□□□ -0.3
CSTF2-201ENST00000372972 CYB5D2Q8WUJ1 264 aa13.15□□□□□ -0.3
CSTF2-201ENST00000372972 UBTD2Q8WUN7 234 aa13.15□□□□□ -0.3
CSTF2-201ENST00000372972 SMG7Q92540 1137 aaKnown RBP13.15□□□□□ -0.3
CSTF2-201ENST00000372972 LRRC58Q96CX6 371 aa13.15□□□□□ -0.3
CSTF2-201ENST00000372972 MRGPRX3Q96LB0 322 aa13.15□□□□□ -0.3
CSTF2-201ENST00000372972 TEX37Q96LM6 180 aa13.15□□□□□ -0.3
CSTF2-201ENST00000372972 TMEM79Q9BSE2 394 aa13.15□□□□□ -0.3
CSTF2-201ENST00000372972 C1orf50Q9BV19 199 aa13.15□□□□□ -0.3
CSTF2-201ENST00000372972 SPATA16Q9BXB7 569 aa13.15□□□□□ -0.3
CSTF2-201ENST00000372972 PBX4Q9BYU1 374 aa13.15□□□□□ -0.3
CSTF2-201ENST00000372972 EBF3Q9H4W6 596 aa13.15□□□□□ -0.3
CSTF2-201ENST00000372972 CXorf56Q9H5V9 222 aa13.15□□□□□ -0.3
CSTF2-201ENST00000372972 ABCD2Q9UBJ2 740 aa13.15□□□□□ -0.3
CSTF2-201ENST00000372972 TMPRSS11EQ9UL52 423 aa13.15□□□□□ -0.3
CSTF2-201ENST00000372972 SLC8A2Q9UPR5 921 aa13.15□□□□□ -0.3
CSTF2-201ENST00000372972 DTNAQ9Y4J8 743 aa13.15□□□□□ -0.3
CSTF2-201ENST00000372972 A6NHS1 94 aa13.14□□□□□ -0.31
CSTF2-201ENST00000372972 TTC34A8MYJ7 566 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms