RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 ETS2P15036 469 aa11.4□□□□□ -0.59
VCL-202ENST00000372755 PTF1AQ7RTS3 328 aa11.4□□□□□ -0.59
VCL-202ENST00000372755 ZBTB46Q86UZ6 589 aa11.4□□□□□ -0.59
VCL-202ENST00000372755 ZNF567Q8N184 647 aa11.4□□□□□ -0.59
VCL-202ENST00000372755 OR52J3Q8NH60 311 aa11.4□□□□□ -0.59
VCL-202ENST00000372755 NMUR2Q9GZQ4 415 aa11.4□□□□□ -0.59
VCL-202ENST00000372755 TTYH1Q9H313 450 aaPredicted RBP11.4□□□□□ -0.59
VCL-202ENST00000372755 ITSN1Q15811 1721 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 A0A0U1RQJ8 604 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 ALPPL2P10696 532 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 CDH12P55289 794 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 UBXN11Q5T124 520 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 CHADLQ6NUI6 762 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 RNF19BQ6ZMZ0 732 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 SERPINA9Q86WD7 417 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 OR2L3Q8NG85 312 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 SETD6Q8TBK2 473 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 DQX1Q8TE96 717 aaKnown RBP11.39□□□□□ -0.59
VCL-202ENST00000372755 DNAJA4Q8WW22 397 aaPredicted RBP11.39□□□□□ -0.59
VCL-202ENST00000372755 ALG3Q92685 438 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 GAL3ST4Q96RP7 486 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 ZNF347Q96SE7 839 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 MRPS17Q9Y2R5 130 aaKnown RBP11.39□□□□□ -0.59
VCL-202ENST00000372755 PCDHGB5Q9Y5G0 923 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 BCL9O00512 1426 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 TRBV23OR9-2A0A075B6M9 112 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 CAPN8A6NHC0 703 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 OR2AG2A6NM03 316 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 AIREO43918 545 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 ICAM3P32942 547 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 HSPB3Q12988 150 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 KLHL22Q53GT1 634 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 PLEKHG4Q58EX7 1191 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 TSTD2Q5T7W7 516 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 PRKAB1Q9Y478 270 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 ESR1P03372 595 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 L1CAMP32004 1257 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 CAP1Q01518 475 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 TLR1Q15399 786 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 EGFLAMQ63HQ2 1017 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 HCAR2Q8TDS4 363 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 UFD1Q92890 307 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 TBATAQ96M53 351 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 ACBD6Q9BR61 282 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 SDCBP2Q9H190 292 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 PCDHGB7Q9Y5F8 929 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 METTL21EPA6NDL7 271 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 PDPK1O15530 556 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 NPHS1O60500 1241 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 PTGER3P43115 390 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 PUS10Q3MIT2 529 aaKnown RBP11.39□□□□□ -0.59
VCL-202ENST00000372755 LDLRAP1Q5SW96 308 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 MSANTD1Q6ZTZ1 278 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 ANKRD23Q86SG2 305 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 ATAD1Q8NBU5 361 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 GLB1L3Q8NCI6 653 aaPredicted RBP11.39□□□□□ -0.59
VCL-202ENST00000372755 RBM15BQ8NDT2 890 aaKnown RBP11.39□□□□□ -0.59
VCL-202ENST00000372755 FAM13CQ8NE31 585 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 NKD2Q969F2 451 aaPredicted RBP11.39□□□□□ -0.59
VCL-202ENST00000372755 KREMEN1Q96MU8 473 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 TUBA8Q9NY65 449 aaPredicted RBP11.39□□□□□ -0.59
VCL-202ENST00000372755 CD84Q9UIB8 345 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 FFAR2O15552 330 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 ATP5A1P25705 553 aaKnown RBP11.39□□□□□ -0.59
VCL-202ENST00000372755 CCKBRP32239 447 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 MSX2P35548 267 aaPredicted RBP11.39□□□□□ -0.59
VCL-202ENST00000372755 MPP1Q00013 466 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 PTP4A2Q12974 167 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 MON1BQ7L1V2 547 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 BRSK1Q8TDC3 778 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 C2orf15Q8WU43 125 aaKnown RBP11.39□□□□□ -0.59
VCL-202ENST00000372755 CPT1BQ92523 772 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 CEP295NLQ96MC4 621 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 JSRP1Q96MG2 331 aaPredicted RBP11.39□□□□□ -0.59
VCL-202ENST00000372755 DEFB118Q96PH6 123 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 PAK6Q9NQU5 681 aaPredicted RBP11.39□□□□□ -0.59
VCL-202ENST00000372755 ZNF446Q9NWS9 450 aa11.39□□□□□ -0.59
VCL-202ENST00000372755 ZNF282Q9UDV7 671 aaPredicted RBP11.39□□□□□ -0.59
VCL-202ENST00000372755 FAM155BO75949 473 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 SNX4O95219 450 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 GOT2P00505 430 aaKnown RBP11.38□□□□□ -0.59
VCL-202ENST00000372755 RENP00797 406 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 OR4Q2P0C623 313 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 EIF2S3P41091 472 aaKnown RBP11.38□□□□□ -0.59
VCL-202ENST00000372755 WASP42768 502 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 ARCN1P48444 511 aaKnown RBP11.38□□□□□ -0.59
VCL-202ENST00000372755 GAD2Q05329 585 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 IL10RBQ08334 325 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 CLEC6AQ6EIG7 209 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 RFWD3Q6PCD5 774 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 USP30Q70CQ3 517 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 UTS2BQ765I0 119 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 VGLL2Q8N8G2 317 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 ZNF570Q96NI8 536 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 NODALQ96S42 347 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 FAM129BQ96TA1 746 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 WRAP53Q9BUR4 548 aaKnown RBP11.38□□□□□ -0.59
VCL-202ENST00000372755 LGR4Q9BXB1 951 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 SRMSQ9H3Y6 488 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 TCF7L1Q9HCS4 588 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms