RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 PAWRQ96IZ0 340 aaKnown RBP16.82■□□□□ 0.28
VEGFA-205ENST00000372067 BBS2Q9BXC9 721 aa16.82■□□□□ 0.28
VEGFA-205ENST00000372067 SACM1LQ9NTJ5 587 aa16.82■□□□□ 0.28
VEGFA-205ENST00000372067 LHX3Q9UBR4 397 aa16.82■□□□□ 0.28
VEGFA-205ENST00000372067 CLEC4EQ9ULY5 219 aa16.82■□□□□ 0.28
VEGFA-205ENST00000372067 RNF103-CHMP3A0A140T963 221 aa16.82■□□□□ 0.28
VEGFA-205ENST00000372067 A0A1B0GTL3 188 aa16.82■□□□□ 0.28
VEGFA-205ENST00000372067 PEX1O43933 1283 aa16.82■□□□□ 0.28
VEGFA-205ENST00000372067 ABLIM3O94929 683 aa16.82■□□□□ 0.28
VEGFA-205ENST00000372067 MLYCDO95822 493 aa16.82■□□□□ 0.28
VEGFA-205ENST00000372067 AP1S1P61966 158 aa16.82■□□□□ 0.28
VEGFA-205ENST00000372067 TRIM25Q14258 630 aaKnown RBP16.82■□□□□ 0.28
VEGFA-205ENST00000372067 KLQ9UEF7 1012 aa16.82■□□□□ 0.28
VEGFA-205ENST00000372067 CCDC154A6NI56 674 aa16.82■□□□□ 0.28
VEGFA-205ENST00000372067 TIPRLO75663 272 aa16.82■□□□□ 0.28
VEGFA-205ENST00000372067 FGF18O76093 207 aa16.82■□□□□ 0.28
VEGFA-205ENST00000372067 CLTBP09497 229 aa16.82■□□□□ 0.28
VEGFA-205ENST00000372067 ALDOCP09972 364 aaKnown RBP16.82■□□□□ 0.28
VEGFA-205ENST00000372067 UBL4AP11441 157 aa16.82■□□□□ 0.28
VEGFA-205ENST00000372067 BMP1P13497 986 aa16.82■□□□□ 0.28
VEGFA-205ENST00000372067 MTHFD2P13995 350 aa16.82■□□□□ 0.28
VEGFA-205ENST00000372067 MPPE1Q53F39 396 aa16.82■□□□□ 0.28
VEGFA-205ENST00000372067 TSPAN33Q86UF1 283 aa16.82■□□□□ 0.28
VEGFA-205ENST00000372067 RBFAQ8N0V3 343 aa16.82■□□□□ 0.28
VEGFA-205ENST00000372067 DCAF4L2Q8NA75 395 aa16.82■□□□□ 0.28
VEGFA-205ENST00000372067 KREMEN2Q8NCW0 462 aa16.82■□□□□ 0.28
VEGFA-205ENST00000372067 OR52B6Q8NGF0 335 aa16.82■□□□□ 0.28
VEGFA-205ENST00000372067 TOP1MTQ969P6 601 aa16.82■□□□□ 0.28
VEGFA-205ENST00000372067 EHD1Q9H4M9 534 aa16.82■□□□□ 0.28
VEGFA-205ENST00000372067 VWA8A3KMH1 1905 aa16.82■□□□□ 0.28
VEGFA-205ENST00000372067 INPP4BO15327 924 aa16.81■□□□□ 0.28
VEGFA-205ENST00000372067 TGM5O43548 720 aa16.81■□□□□ 0.28
VEGFA-205ENST00000372067 PGLSO95336 258 aa16.81■□□□□ 0.28
VEGFA-205ENST00000372067 PARNO95453 639 aaKnown RBP16.81■□□□□ 0.28
VEGFA-205ENST00000372067 CR2P20023 1033 aa16.81■□□□□ 0.28
VEGFA-205ENST00000372067 CTSOP43234 321 aaPredicted RBP16.81■□□□□ 0.28
VEGFA-205ENST00000372067 SNRPD1P62314 119 aaKnown RBP16.81■□□□□ 0.28
VEGFA-205ENST00000372067 NR1D2Q14995 579 aa16.81■□□□□ 0.28
VEGFA-205ENST00000372067 TYSND1Q2T9J0 566 aa16.81■□□□□ 0.28
VEGFA-205ENST00000372067 KBTBD6Q86V97 674 aa16.81■□□□□ 0.28
VEGFA-205ENST00000372067 RHEBL1Q8TAI7 183 aa16.81■□□□□ 0.28
VEGFA-205ENST00000372067 FAM126AQ9BYI3 521 aaPredicted RBP16.81■□□□□ 0.28
VEGFA-205ENST00000372067 NSUN3Q9H649 340 aaKnown RBP16.81■□□□□ 0.28
VEGFA-205ENST00000372067 CLK4Q9HAZ1 481 aaKnown RBP16.81■□□□□ 0.28
VEGFA-205ENST00000372067 ZFP14Q9HCL3 533 aa16.81■□□□□ 0.28
VEGFA-205ENST00000372067 C6orf203Q9P0P8 240 aaPredicted RBP16.81■□□□□ 0.28
VEGFA-205ENST00000372067 GNPTGQ9UJJ9 305 aa16.81■□□□□ 0.28
VEGFA-205ENST00000372067 SLC25A13Q9UJS0 675 aa16.81■□□□□ 0.28
VEGFA-205ENST00000372067 PCDHGA3Q9Y5H0 932 aa16.81■□□□□ 0.28
VEGFA-205ENST00000372067 NELFEP18615 380 aaKnown RBP16.81■□□□□ 0.28
VEGFA-205ENST00000372067 HNF1BP35680 557 aa16.81■□□□□ 0.28
VEGFA-205ENST00000372067 RPS3AP61247 264 aaKnown RBP16.81■□□□□ 0.28
VEGFA-205ENST00000372067 ACVR1Q04771 509 aa16.81■□□□□ 0.28
VEGFA-205ENST00000372067 KRT80Q6KB66 452 aa16.81■□□□□ 0.28
VEGFA-205ENST00000372067 EFL1Q7Z2Z2 1120 aaKnown RBP16.81■□□□□ 0.28
VEGFA-205ENST00000372067 ERI1Q8IV48 349 aaKnown RBP16.81■□□□□ 0.28
VEGFA-205ENST00000372067 LRTOMTQ8WZ04 291 aa16.81■□□□□ 0.28
VEGFA-205ENST00000372067 SOBPA7XYQ1 873 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 PPP3CCP48454 512 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 KCNC4Q03721 635 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 CTSL3PQ5NE16 218 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 SPPL2CQ8IUH8 684 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 CD200R1Q8TD46 325 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 SEZ6LQ9BYH1 1024 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 OSBPL6Q9BZF3 934 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 IPPKQ9H8X2 491 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 HCFC1R1Q9NWW0 138 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 IL17CQ9P0M4 197 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 GOLGA4Q13439 2230 aaKnown RBP16.8■□□□□ 0.28
VEGFA-205ENST00000372067 MTX2O75431 263 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 ATP1A4Q13733 1029 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 APOFQ13790 326 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 TBCELQ5QJ74 424 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 C6orf52Q5T4I8 152 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 TXNDC11Q6PKC3 985 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 LARP4Q71RC2 724 aaKnown RBP eCLIP16.8■□□□□ 0.281e-25■□□□□ 10.3
VEGFA-205ENST00000372067 ADAMTSL2Q86TH1 951 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 DDHD1Q8NEL9 900 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 LRCH3Q96II8 777 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 ZBTB18Q99592 522 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 PRPF18Q99633 342 aaKnown RBP16.8■□□□□ 0.28
VEGFA-205ENST00000372067 POPDC3Q9HBV1 291 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 PCDHGA7Q9Y5G6 932 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 HTTP42858 3142 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.8■□□□□ 0.28
VEGFA-205ENST00000372067 PRORSD1PA6NEY8 169 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 MT-ND1P03886 318 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 TTLL9Q3SXZ7 439 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 INO80DQ53TQ3 878 aaPredicted RBP16.8■□□□□ 0.28
VEGFA-205ENST00000372067 RFPL4BQ6ZWI9 263 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 GAREM2Q75VX8 874 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 DDX53Q86TM3 631 aaKnown RBP16.8■□□□□ 0.28
VEGFA-205ENST00000372067 CATSPER1Q8NEC5 780 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 SEPHS2Q99611 448 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 TRIM15Q9C019 465 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 AASDHPPTQ9NRN7 309 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 OPTCQ9UBM4 332 aa16.8■□□□□ 0.28
VEGFA-205ENST00000372067 FAM149AA5PLN7 773 aa16.79■□□□□ 0.28
VEGFA-205ENST00000372067 KDM1AO60341 852 aa16.79■□□□□ 0.28
VEGFA-205ENST00000372067 ADH1AP07327 375 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms