RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 C1QTNF3Q9BXJ4 246 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 ASB8Q9H765 288 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 FBRSL1Q9HCM7 1045 aaKnown RBP12.63□□□□□ -0.39
GPC3-201ENST00000370818 CDH7Q9ULB5 785 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 DHRS7Q9Y394 339 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 TRBV5-4A0A0C4DH59 114 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 H3BNH8 94 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 STX16-NPEPL1H3BU86 382 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 STX16O14662 325 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 AZIN1O14977 448 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 NDUFB5O43674 189 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 RHOP08100 348 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 INHBBP09529 407 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 UGT1A6P19224 532 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 UGT1A1P22309 533 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 UGT1A4P22310 534 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 S100A1P23297 94 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 UGT1A3P35503 534 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 UGT1A5P35504 534 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 DPP6P42658 865 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 MRPS22P82650 360 aaKnown RBP12.62□□□□□ -0.39
GPC3-201ENST00000370818 SEMG2Q02383 582 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 FPGSQ05932 587 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 CAMK1Q14012 370 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 SQLEQ14534 574 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 KANK2Q63ZY3 851 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 C22orf39Q6P5X5 142 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 C16orf89Q6UX73 402 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 SNX20Q7Z614 316 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 TWIST2Q8WVJ9 160 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 STARD8Q92502 1023 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 ISG20Q96AZ6 181 aaKnown RBP12.62□□□□□ -0.39
GPC3-201ENST00000370818 C12orf43Q96C57 262 aaKnown RBP12.62□□□□□ -0.39
GPC3-201ENST00000370818 ISOC1Q96CN7 298 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 NPAS2Q99743 824 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 PKP2Q99959 881 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 LINC00597Q9H2U6 94 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 TUBB1Q9H4B7 451 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 AKTIPQ9H8T0 292 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 SEMA4BQ9NPR2 832 aaPredicted RBP12.62□□□□□ -0.39
GPC3-201ENST00000370818 TDP1Q9NUW8 608 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 ASB1Q9Y576 335 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 PCDHB1Q9Y5F3 818 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 HCFC2Q9Y5Z7 792 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 C7orf72A4D263 438 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 NEDD8-MDP1E9PL57 170 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 TMX2-CTNND1H3BSU7 103 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 TLL1O43897 1013 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 ALDOCP09972 364 aaKnown RBP12.62□□□□□ -0.39
GPC3-201ENST00000370818 PTPN2P17706 415 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 PRDX3P30048 256 aaKnown RBP12.62□□□□□ -0.39
GPC3-201ENST00000370818 IRS1P35568 1242 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 SNRPD1P62314 119 aaKnown RBP12.62□□□□□ -0.39
GPC3-201ENST00000370818 ANKS6Q68DC2 871 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 UGT3A1Q6NUS8 523 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 CLVS1Q8IUQ0 354 aaPredicted RBP12.62□□□□□ -0.39
GPC3-201ENST00000370818 PGAM4Q8N0Y7 254 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 PAF1Q8N7H5 531 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 SNX31Q8N9S9 440 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 LKAAEAR1Q8TD35 194 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.62□□□□□ -0.392e-6■■■■□ 23.7
GPC3-201ENST00000370818 CIPCQ9C0C6 399 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 TPK1Q9H3S4 243 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 EFCAB1Q9HAE3 211 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 EPS15L1Q9UBC2 864 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 SLCO3A1Q9UIG8 710 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 ZNF225Q9UK10 706 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 PCTPQ9UKL6 214 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 PRPF19Q9UMS4 504 aaKnown RBP12.62□□□□□ -0.39
GPC3-201ENST00000370818 PRSS21Q9Y6M0 314 aa12.62□□□□□ -0.39
GPC3-201ENST00000370818 PDE4DIPQ5VU43 2346 aa12.61□□□□□ -0.39
GPC3-201ENST00000370818 PSMD12O00232 456 aaPredicted RBP12.61□□□□□ -0.39
GPC3-201ENST00000370818 PIP5K1BO14986 540 aa12.61□□□□□ -0.39
GPC3-201ENST00000370818 BNIP3LO60238 219 aa12.61□□□□□ -0.39
GPC3-201ENST00000370818 ZNF26P17031 533 aaPredicted RBP12.61□□□□□ -0.39
GPC3-201ENST00000370818 RPS3P23396 243 aaKnown RBP eCLIP12.61□□□□□ -0.394e-42■■■■□ 20.5
GPC3-201ENST00000370818 TUBA4AP68366 448 aa12.61□□□□□ -0.39
GPC3-201ENST00000370818 NTHL1P78549 312 aa12.61□□□□□ -0.39
GPC3-201ENST00000370818 TXNL4AP83876 142 aaKnown RBP12.61□□□□□ -0.39
GPC3-201ENST00000370818 ATP1A4Q13733 1029 aa12.61□□□□□ -0.39
GPC3-201ENST00000370818 CHRNA6Q15825 494 aa12.61□□□□□ -0.39
GPC3-201ENST00000370818 CRTC1Q6UUV9 634 aa12.61□□□□□ -0.39
GPC3-201ENST00000370818 DPY19L3Q6ZPD9 716 aa12.61□□□□□ -0.39
GPC3-201ENST00000370818 PHYKPLQ8IUZ5 450 aa12.61□□□□□ -0.39
GPC3-201ENST00000370818 CLDN19Q8N6F1 224 aa12.61□□□□□ -0.39
GPC3-201ENST00000370818 TBC1D15Q8TC07 691 aa12.61□□□□□ -0.39
GPC3-201ENST00000370818 IRF7Q92985 503 aa12.61□□□□□ -0.39
GPC3-201ENST00000370818 ESAMQ96AP7 390 aa12.61□□□□□ -0.39
GPC3-201ENST00000370818 PDLIM5Q96HC4 596 aaKnown RBP12.61□□□□□ -0.39
GPC3-201ENST00000370818 CDRT15Q96T59 188 aa12.61□□□□□ -0.39
GPC3-201ENST00000370818 C17orf80Q9BSJ5 609 aa12.61□□□□□ -0.39
GPC3-201ENST00000370818 BBS2Q9BXC9 721 aa12.61□□□□□ -0.39
GPC3-201ENST00000370818 CAAP1Q9H8G2 361 aa12.61□□□□□ -0.39
GPC3-201ENST00000370818 OLAHQ9NV23 265 aa12.61□□□□□ -0.39
GPC3-201ENST00000370818 GLYATL1P3A0A0U1RQE8 302 aa12.61□□□□□ -0.39
GPC3-201ENST00000370818 GRM6O15303 877 aa12.61□□□□□ -0.39
GPC3-201ENST00000370818 GPC4O75487 556 aa12.61□□□□□ -0.39
GPC3-201ENST00000370818 SULT1C4O75897 302 aa12.61□□□□□ -0.39
GPC3-201ENST00000370818 ENO3P13929 434 aaPredicted RBP12.61□□□□□ -0.39
GPC3-201ENST00000370818 EPCAMP16422 314 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms