RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 AHSGP02765 367 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 RABGGTBP53611 331 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 TUBA3CQ13748 450 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 PLEKHG4Q58EX7 1191 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 MOSPD2Q8NHP6 518 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 FNDC8Q8TC99 324 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 EBPLQ9BY08 206 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 SEC14L3Q9UDX4 400 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 DHRS7Q9Y394 339 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 SIGLEC1Q9BZZ2 1709 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 LOC100130705A0A1B0GUX0 176 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 ZW10O43264 779 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 OR6A2O95222 327 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 POLR2EP19388 210 aaKnown RBP15.71■□□□□ 0.11
COL17A1-202ENST00000369733 RORCP51449 518 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 ALDH3A2P51648 485 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 IST1P53990 364 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 HNRNPDQ14103 355 aaKnown RBP15.71■□□□□ 0.11
COL17A1-202ENST00000369733 DCST1Q5T197 706 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 CDCA2Q69YH5 1023 aaPredicted RBP15.71■□□□□ 0.11
COL17A1-202ENST00000369733 CXorf57Q6NSI4 855 aaKnown RBP15.71■□□□□ 0.11
COL17A1-202ENST00000369733 CERS6Q6ZMG9 384 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 USP30Q70CQ3 517 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 GULP1Q9UBP9 304 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 PSAT1Q9Y617 370 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 ERAL1O75616 437 aaKnown RBP15.71■□□□□ 0.11
COL17A1-202ENST00000369733 RPS14P62263 151 aaKnown RBP15.71■□□□□ 0.11
COL17A1-202ENST00000369733 SIX1Q15475 284 aaPredicted RBP15.71■□□□□ 0.11
COL17A1-202ENST00000369733 PRAMEF19Q5SWL8 479 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 TPRG1LQ5T0D9 272 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 PCED1BQ96HM7 432 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 FCRL4Q96PJ5 515 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 AMBNQ9NP70 447 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 MIOSQ9NXC5 875 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 YJEFN3A6XGL0 299 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 ANXA4P09525 319 aaPredicted RBP15.71■□□□□ 0.11
COL17A1-202ENST00000369733 PBX3P40426 434 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 RPIAP49247 311 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 CAND1Q86VP6 1230 aaKnown RBP15.71■□□□□ 0.11
COL17A1-202ENST00000369733 BRSK1Q8TDC3 778 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 MRPL9Q9BYD2 267 aaKnown RBP15.71■□□□□ 0.11
COL17A1-202ENST00000369733 EHD1Q9H4M9 534 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 ZNF696Q9H7X3 374 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 RIMBP3CA6NJZ7 1639 aa15.71■□□□□ 0.1
COL17A1-202ENST00000369733 RIMBP3BA6NNM3 1639 aa15.71■□□□□ 0.1
COL17A1-202ENST00000369733 RIMBP3Q9UFD9 1639 aa15.71■□□□□ 0.1
COL17A1-202ENST00000369733 PCP4L1A6NKN8 68 aa15.71■□□□□ 0.1
COL17A1-202ENST00000369733 GUCA1AP43080 201 aaPredicted RBP15.71■□□□□ 0.1
COL17A1-202ENST00000369733 TREML2Q5T2D2 321 aa15.71■□□□□ 0.1
COL17A1-202ENST00000369733 UBAP2Q5T6F2 1119 aaKnown RBP15.71■□□□□ 0.1
COL17A1-202ENST00000369733 CGREF1Q99674 301 aa15.71■□□□□ 0.1
COL17A1-202ENST00000369733 STARD7Q9NQZ5 370 aa15.71■□□□□ 0.1
COL17A1-202ENST00000369733 AKAP7Q9P0M2 348 aaPredicted RBP15.71■□□□□ 0.1
COL17A1-202ENST00000369733 OAS3Q9Y6K5 1087 aaKnown RBP15.71■□□□□ 0.1
COL17A1-202ENST00000369733 NDST2P52849 883 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 E2F2Q14209 437 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 RAB39AQ14964 217 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 KCNA10Q16322 511 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 MEP1AQ16819 746 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 BIRC7Q96CA5 298 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 ITPAQ9BY32 194 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 SLC22A4Q9H015 551 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 LTN1O94822 1766 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 BOLA2-SMG1P6H3BVE0 249 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 DENRO43583 198 aaKnown RBP15.7■□□□□ 0.1
COL17A1-202ENST00000369733 TGFBR2P37173 567 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 STT3AP46977 705 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 YBEYP58557 167 aaPredicted RBP15.7■□□□□ 0.1
COL17A1-202ENST00000369733 GMFBP60983 142 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 OLIG2Q13516 323 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 SUZ12Q15022 739 aaKnown RBP15.7■□□□□ 0.1
COL17A1-202ENST00000369733 PLD6Q8N2A8 252 aaKnown RBP15.7■□□□□ 0.1
COL17A1-202ENST00000369733 LRRC20Q8TCA0 184 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 CDK15Q96Q40 435 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 FZD8Q9H461 694 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 MAN2B2Q9Y2E5 1009 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 CLDN11O75508 207 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 PTX3P26022 381 aaPredicted RBP15.7■□□□□ 0.1
COL17A1-202ENST00000369733 MVKQ03426 396 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 FBXL19Q6PCT2 694 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 RBM12BQ8IXT5 1001 aaKnown RBP15.7■□□□□ 0.1
COL17A1-202ENST00000369733 TMEM192Q8IY95 271 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 PSMG2Q969U7 264 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 ST14Q9Y5Y6 855 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 ARL5AQ9Y689 179 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 PRAMEF33A0A0G2JMD5 474 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 OR51F1A6NGY5 319 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 E7ESA3 106 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 PRAMEF10O60809 474 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 PUDPQ08623 228 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.7■□□□□ 0.1
COL17A1-202ENST00000369733 PDE12Q6L8Q7 609 aaKnown RBP15.7■□□□□ 0.1
COL17A1-202ENST00000369733 RNF44Q7L0R7 432 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 KRT77Q7Z794 578 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 COMMD2Q86X83 199 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 PQLC3Q8N755 202 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 DNAJB8Q8NHS0 232 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 C8orf48Q96LL4 319 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 FTHL17Q9BXU8 183 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 CFL2Q9Y281 166 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms