RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 C7orf26Q96N11 449 aa8.68□□□□□ -1.02
SNX27-201ENST00000368838 GPR78Q96P69 363 aa8.68□□□□□ -1.02
SNX27-201ENST00000368838 VPS35Q96QK1 796 aa8.68□□□□□ -1.02
SNX27-201ENST00000368838 CCT8L2Q96SF2 557 aa8.68□□□□□ -1.02
SNX27-201ENST00000368838 MYOCQ99972 504 aa8.68□□□□□ -1.02
SNX27-201ENST00000368838 AARSD1Q9BTE6 412 aaKnown RBP8.68□□□□□ -1.02
SNX27-201ENST00000368838 GPR63Q9BZJ6 419 aa8.68□□□□□ -1.02
SNX27-201ENST00000368838 NSRP1Q9H0G5 558 aaKnown RBP8.68□□□□□ -1.02
SNX27-201ENST00000368838 TNKS2Q9H2K2 1166 aa8.68□□□□□ -1.02
SNX27-201ENST00000368838 IL26Q9NPH9 171 aa8.68□□□□□ -1.02
SNX27-201ENST00000368838 HAO1Q9UJM8 370 aa8.68□□□□□ -1.02
SNX27-201ENST00000368838 TLK1Q9UKI8 766 aa8.68□□□□□ -1.02
SNX27-201ENST00000368838 SARDHQ9UL12 918 aa8.68□□□□□ -1.02
SNX27-201ENST00000368838 PCDHGB2Q9Y5G2 931 aa8.68□□□□□ -1.02
SNX27-201ENST00000368838 TBC1D3DA0A087WVF3 549 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 TBC1D3IA0A087WXS9 549 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 TBC1D3EA0A087X179 549 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 TBC1D3KA0A087X1G2 549 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 C1orf232A0A0U1RR37 186 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 A0A1B0GTQ1 180 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 TBC1D3FA6NER0 549 aaPredicted RBP8.67□□□□□ -1.02
SNX27-201ENST00000368838 NPIPB15A6NHN6 443 aaPredicted RBP8.67□□□□□ -1.02
SNX27-201ENST00000368838 LRRC72A6NJI9 287 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 TBC1D3LB9A6J9 549 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 F8W8V4 182 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 QSOX1O00391 747 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 PRMT5O14744 637 aaPredicted RBP8.67□□□□□ -1.02
SNX27-201ENST00000368838 VILLO15195 856 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 TNFSF14O43557 240 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 SDC3O75056 442 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 SNNO75324 88 aaPredicted RBP8.67□□□□□ -1.02
SNX27-201ENST00000368838 LEFTY1O75610 366 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 PIAS1O75925 651 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 SRP72O76094 671 aaKnown RBP8.67□□□□□ -1.02
SNX27-201ENST00000368838 PIGNO95427 931 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 PRKCGP05129 697 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 UGT2B4P06133 528 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 PYGLP06737 847 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 BPGMP07738 259 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 GSTM1P09488 218 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 TBC1D3HP0C7X1 549 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 PKMP14618 531 aaKnown RBP8.67□□□□□ -1.02
SNX27-201ENST00000368838 ZNF7P17097 686 aaPredicted RBP8.67□□□□□ -1.02
SNX27-201ENST00000368838 ITGALP20701 1170 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 DRD4P21917 467 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 CD38P28907 300 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 MC4RP32245 332 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 SPINT3P49223 89 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 HK2P52789 917 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 ATP6V0D1P61421 351 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 GSTM4Q03013 218 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 PTSQ03393 145 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 DPTQ07507 201 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 BNIP3Q12983 259 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 NFATC2Q13469 925 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 BMPR2Q13873 1038 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 USP10Q14694 798 aaKnown RBP8.67□□□□□ -1.02
SNX27-201ENST00000368838 ACAP2Q15057 778 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 SEPT7Q16181 437 aaKnown RBP8.67□□□□□ -1.02
SNX27-201ENST00000368838 TMEM52BQ4KMG9 183 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 SPDYAQ5MJ70 313 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 HECTD2Q5U5R9 776 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 AGAP9Q5VTM2 703 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 ATG16L1Q676U5 607 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 TBC1D3GQ6DHY5 549 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 TBC1D3CQ6IPX1 549 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 LRRC8EQ6NSJ5 796 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 UGT3A1Q6NUS8 523 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 METTL2BQ6P1Q9 378 aaKnown RBP8.67□□□□□ -1.02
SNX27-201ENST00000368838 CNSTQ6PJW8 725 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 MACC1Q6ZN28 852 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 LYSMD3Q7Z3D4 306 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 KDELC2Q7Z4H8 507 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 PTAR1Q7Z6K3 402 aaPredicted RBP8.67□□□□□ -1.02
SNX27-201ENST00000368838 TECPR1Q7Z6L1 1165 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 PDZD3Q86UT5 571 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 TBC1D3Q8IZP1 549 aaPredicted RBP8.67□□□□□ -1.02
SNX27-201ENST00000368838 CENPLQ8N0S6 344 aaPredicted RBP8.67□□□□□ -1.02
SNX27-201ENST00000368838 RBFAQ8N0V3 343 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.67□□□□□ -1.02
SNX27-201ENST00000368838 TRAM1L1Q8N609 369 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 CHST14Q8NCH0 376 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 OR2T34Q8NGX1 318 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 ASB12Q8WXK4 309 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 KLHL32Q96NJ5 620 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 BIRC8Q96P09 236 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 MRPL57Q9BQC6 102 aaKnown RBP8.67□□□□□ -1.02
SNX27-201ENST00000368838 TAS2R13Q9NYV9 303 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 PKD2L2Q9NZM6 624 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 COPG2Q9UBF2 871 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 EMCNQ9ULC0 261 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 TMCO1Q9UM00 188 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 MED16Q9Y2X0 877 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 KCTD3Q9Y597 815 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 OAS3Q9Y6K5 1087 aaKnown RBP8.67□□□□□ -1.02
SNX27-201ENST00000368838 SLC30A1Q9Y6M5 507 aa8.67□□□□□ -1.02
SNX27-201ENST00000368838 GCN1Q92616 2671 aaKnown RBP8.67□□□□□ -1.02
SNX27-201ENST00000368838 PTPRQQ9UMZ3 2332 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 ZNF106Q9H2Y7 1883 aaKnown RBP8.66□□□□□ -1.02
SNX27-201ENST00000368838 GLYATL1P3A0A0U1RQE8 302 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms