RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 SEMA4CQ9C0C4 833 aa14.36□□□□□ -0.11
SF3B5-201ENST00000367569 STN1Q9H668 368 aaKnown RBP14.36□□□□□ -0.11
SF3B5-201ENST00000367569 CATSPERZQ9NTU4 200 aa14.36□□□□□ -0.11
SF3B5-201ENST00000367569 IGLV3-16A0A075B6K0 115 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 KIR2DS5A0A0G2JLQ3 304 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 A0A0G2JNG1 304 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 TMX2-CTNND1H3BSU7 103 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 KIR2DS3K7RE56 304 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 CPNE6O95741 557 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 VIPP01282 170 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 PLA2G2AP14555 144 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 SLC2A4P14672 509 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 PNLIPP16233 465 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 SLC5A2P31639 672 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 CCKBRP32239 447 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 GFERP55789 205 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 EIF3IQ13347 325 aaKnown RBP14.35□□□□□ -0.11
SF3B5-201ENST00000367569 PTK6Q13882 451 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 BOP1Q14137 746 aaKnown RBP14.35□□□□□ -0.11
SF3B5-201ENST00000367569 LY6DQ14210 128 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 GPR18Q14330 331 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 KIR2DS5Q14953 304 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 NR1D2Q14995 579 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 KIAA1614Q5VZ46 1190 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 IZUMO3Q5VZ72 239 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 LRRC8BQ6P9F7 803 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 ZNF574Q6ZN55 896 aaPredicted RBP14.35□□□□□ -0.11
SF3B5-201ENST00000367569 SPNS2Q8IVW8 549 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 CFAP206Q8IYR0 622 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 OR4L1Q8NH43 312 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 RSC1A1Q92681 617 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 ZNF669Q96BR6 464 aaPredicted RBP14.35□□□□□ -0.11
SF3B5-201ENST00000367569 SERPINB12Q96P63 405 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 TRIM31Q9BZY9 425 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 STRADBQ9C0K7 418 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 IL22Q9GZX6 179 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 SARS2Q9NP81 518 aaKnown RBP14.35□□□□□ -0.11
SF3B5-201ENST00000367569 TREX1Q9NSU2 369 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 WDR70Q9NW82 654 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 BFARQ9NZS9 450 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 PISDQ9UG56 409 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 TSR3Q9UJK0 312 aaKnown RBP14.35□□□□□ -0.11
SF3B5-201ENST00000367569 LOXL2Q9Y4K0 774 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 PCDHGA7Q9Y5G6 932 aa14.35□□□□□ -0.11
SF3B5-201ENST00000367569 IGHV5-10-1A0A0J9YXX1 117 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 MGAT4DA6NG13 374 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 TTI1O43156 1089 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 EFSO43281 561 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 DUX1O43812 170 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 SLC35G4P0C7Q5 338 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 ARNTP27540 789 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 PDHA2P29803 388 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 CASQ1P31415 396 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 ETV5P41161 510 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 HALP42357 657 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 MAGEA6P43360 314 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 PPP1CAP62136 330 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 ACVR1Q04771 509 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 ZFP36L1Q07352 338 aaKnown RBP14.34□□□□□ -0.11
SF3B5-201ENST00000367569 DMPKQ09013 629 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 TGIF1Q15583 401 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 RPE65Q16518 533 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 FASTKD1Q53R41 847 aaKnown RBP14.34□□□□□ -0.11
SF3B5-201ENST00000367569 CCDC81Q6ZN84 652 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 PIM3Q86V86 326 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 JAMLQ86YT9 394 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 KRT222Q8N1A0 295 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 NAT8LQ8N9F0 302 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 OR2L2Q8NH16 312 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 OR10G6Q8NH81 332 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 HM13Q8TCT9 377 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 NCSTNQ92542 709 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 PMEPA1Q969W9 287 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.34□□□□□ -0.11
SF3B5-201ENST00000367569 C12orf66Q96MD2 445 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 PWWP2AQ96N64 755 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 TMEM74Q96NL1 305 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 INSM2Q96T92 566 aaPredicted RBP14.34□□□□□ -0.11
SF3B5-201ENST00000367569 KRT12Q99456 494 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 COG4Q9H9E3 785 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.34□□□□□ -0.11
SF3B5-201ENST00000367569 OGFRQ9NZT2 677 aa14.34□□□□□ -0.11
SF3B5-201ENST00000367569 UBA6A0AVT1 1052 aaPredicted RBP14.33□□□□□ -0.12
SF3B5-201ENST00000367569 IQCF5A8MTL0 148 aa14.33□□□□□ -0.12
SF3B5-201ENST00000367569 DNALI1O14645 258 aaPredicted RBP14.33□□□□□ -0.12
SF3B5-201ENST00000367569 VAPBO95292 243 aa14.33□□□□□ -0.12
SF3B5-201ENST00000367569 MTHFD1P11586 935 aaKnown RBP14.33□□□□□ -0.12
SF3B5-201ENST00000367569 PSMA3P25788 255 aa14.33□□□□□ -0.12
SF3B5-201ENST00000367569 ARCN1P48444 511 aaKnown RBP14.33□□□□□ -0.12
SF3B5-201ENST00000367569 NPY2RP49146 381 aa14.33□□□□□ -0.12
SF3B5-201ENST00000367569 MAPK10P53779 464 aa14.33□□□□□ -0.12
SF3B5-201ENST00000367569 DR1Q01658 176 aa14.33□□□□□ -0.12
SF3B5-201ENST00000367569 PLCL1Q15111 1095 aa14.33□□□□□ -0.12
SF3B5-201ENST00000367569 HP1BP3Q5SSJ5 553 aaPredicted RBP14.33□□□□□ -0.12
SF3B5-201ENST00000367569 RNASEH2BQ5TBB1 312 aaKnown RBP14.33□□□□□ -0.12
SF3B5-201ENST00000367569 AGAP9Q5VTM2 703 aa14.33□□□□□ -0.12
SF3B5-201ENST00000367569 ABRAXAS1Q6UWZ7 409 aa14.33□□□□□ -0.12
SF3B5-201ENST00000367569 TMEM26Q6ZUK4 368 aa14.33□□□□□ -0.12
SF3B5-201ENST00000367569 PPIL6Q8IXY8 311 aa14.33□□□□□ -0.12
SF3B5-201ENST00000367569 ELMO1Q92556 727 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms