RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 ZNF28P17035 718 aa12.16□□□□□ -0.46
MRPL55-209ENST00000366735 NELFEP18615 380 aaKnown RBP12.16□□□□□ -0.46
MRPL55-209ENST00000366735 RPL10P27635 214 aaKnown RBP12.16□□□□□ -0.46
MRPL55-209ENST00000366735 PTPN7P35236 360 aa12.16□□□□□ -0.46
MRPL55-209ENST00000366735 SLC19A1P41440 591 aa12.16□□□□□ -0.46
MRPL55-209ENST00000366735 ARL4DP49703 201 aa12.16□□□□□ -0.46
MRPL55-209ENST00000366735 COPS2P61201 443 aa12.16□□□□□ -0.46
MRPL55-209ENST00000366735 C2orf54Q08AI8 447 aa12.16□□□□□ -0.46
MRPL55-209ENST00000366735 ZBTB17Q13105 803 aa12.16□□□□□ -0.46
MRPL55-209ENST00000366735 TUBB3Q13509 450 aa12.16□□□□□ -0.46
MRPL55-209ENST00000366735 GPR18Q14330 331 aa12.16□□□□□ -0.46
MRPL55-209ENST00000366735 IHHQ14623 411 aa12.16□□□□□ -0.46
MRPL55-209ENST00000366735 IGFBP7Q16270 282 aa12.16□□□□□ -0.46
MRPL55-209ENST00000366735 SWT1Q5T5J6 900 aaKnown RBP12.16□□□□□ -0.46
MRPL55-209ENST00000366735 ASB18Q6ZVZ8 466 aa12.16□□□□□ -0.46
MRPL55-209ENST00000366735 KMT5CQ86Y97 462 aa12.16□□□□□ -0.46
MRPL55-209ENST00000366735 SLC13A5Q86YT5 568 aaPredicted RBP12.16□□□□□ -0.46
MRPL55-209ENST00000366735 RCOR2Q8IZ40 523 aa12.16□□□□□ -0.46
MRPL55-209ENST00000366735 PQLC3Q8N755 202 aa12.16□□□□□ -0.46
MRPL55-209ENST00000366735 MAIP1Q8WWC4 291 aa12.16□□□□□ -0.46
MRPL55-209ENST00000366735 KLHL6Q8WZ60 621 aa12.16□□□□□ -0.46
MRPL55-209ENST00000366735 ANKRD7Q92527 254 aa12.16□□□□□ -0.46
MRPL55-209ENST00000366735 MIB2Q96AX9 1013 aa12.16□□□□□ -0.46
MRPL55-209ENST00000366735 ELMO2Q96JJ3 720 aa12.16□□□□□ -0.46
MRPL55-209ENST00000366735 AGAP3Q96P47 875 aa12.16□□□□□ -0.46
MRPL55-209ENST00000366735 CD180Q99467 661 aa12.16□□□□□ -0.46
MRPL55-209ENST00000366735 TRABDQ9H4I3 376 aa12.16□□□□□ -0.46
MRPL55-209ENST00000366735 SLC40A1Q9NP59 571 aa12.16□□□□□ -0.46
MRPL55-209ENST00000366735 LHX9Q9NQ69 397 aa12.16□□□□□ -0.46
MRPL55-209ENST00000366735 ZNF624Q9P2J8 865 aaPredicted RBP12.16□□□□□ -0.46
MRPL55-209ENST00000366735 VPS4AQ9UN37 437 aa12.16□□□□□ -0.46
MRPL55-209ENST00000366735 G3BP2Q9UN86 482 aaKnown RBP12.16□□□□□ -0.46
MRPL55-209ENST00000366735 SLC30A1Q9Y6M5 507 aa12.16□□□□□ -0.46
MRPL55-209ENST00000366735 COL12A1Q99715 3063 aa12.16□□□□□ -0.46
MRPL55-209ENST00000366735 PIPSLA2A3N6 862 aa12.15□□□□□ -0.46
MRPL55-209ENST00000366735 CLEC18AA5D8T8 446 aa12.15□□□□□ -0.46
MRPL55-209ENST00000366735 OR52A4PA6NMU1 304 aa12.15□□□□□ -0.46
MRPL55-209ENST00000366735 PIRTP0C851 137 aa12.15□□□□□ -0.46
MRPL55-209ENST00000366735 BPIP17213 487 aa12.15□□□□□ -0.46
MRPL55-209ENST00000366735 CETN2P41208 172 aa12.15□□□□□ -0.46
MRPL55-209ENST00000366735 LEPRP48357 1165 aaKnown RBP12.15□□□□□ -0.46
MRPL55-209ENST00000366735 CD97P48960 835 aa12.15□□□□□ -0.46
MRPL55-209ENST00000366735 RPS15P62841 145 aaKnown RBP12.15□□□□□ -0.46
MRPL55-209ENST00000366735 SH3BP2P78314 561 aa12.15□□□□□ -0.46
MRPL55-209ENST00000366735 SLC10A2Q12908 348 aaPredicted RBP12.15□□□□□ -0.46
MRPL55-209ENST00000366735 ITGA9Q13797 1035 aa12.15□□□□□ -0.46
MRPL55-209ENST00000366735 TAZQ16635 292 aa12.15□□□□□ -0.46
MRPL55-209ENST00000366735 LONRF2Q1L5Z9 754 aa12.15□□□□□ -0.46
MRPL55-209ENST00000366735 ZNF648Q5T619 568 aaPredicted RBP12.15□□□□□ -0.46
MRPL55-209ENST00000366735 SLC9A4Q6AI14 798 aa12.15□□□□□ -0.46
MRPL55-209ENST00000366735 CLEC18BQ6UXF7 455 aa12.15□□□□□ -0.46
MRPL55-209ENST00000366735 FAM92BQ6ZTR7 304 aa12.15□□□□□ -0.46
MRPL55-209ENST00000366735 APLFQ8IW19 511 aaPredicted RBP12.15□□□□□ -0.46
MRPL55-209ENST00000366735 PLD5Q8N7P1 536 aa12.15□□□□□ -0.46
MRPL55-209ENST00000366735 CLEC18CQ8NCF0 446 aa12.15□□□□□ -0.46
MRPL55-209ENST00000366735 THAP4Q8WY91 577 aa12.15□□□□□ -0.46
MRPL55-209ENST00000366735 RBM41Q96IZ5 413 aaKnown RBP12.15□□□□□ -0.46
MRPL55-209ENST00000366735 TRIB3Q96RU7 358 aa12.15□□□□□ -0.46
MRPL55-209ENST00000366735 GPR87Q9BY21 358 aa12.15□□□□□ -0.46
MRPL55-209ENST00000366735 ANKZF1Q9H8Y5 726 aa12.15□□□□□ -0.46
MRPL55-209ENST00000366735 FANCEQ9HB96 536 aa12.15□□□□□ -0.46
MRPL55-209ENST00000366735 HACD3Q9P035 362 aa12.15□□□□□ -0.46
MRPL55-209ENST00000366735 SCHIP1Q9P0W5 487 aaPredicted RBP12.15□□□□□ -0.46
MRPL55-209ENST00000366735 RAB21Q9UL25 225 aa12.15□□□□□ -0.46
MRPL55-209ENST00000366735 NBASA2RRP1 2371 aa12.15□□□□□ -0.46
MRPL55-209ENST00000366735 GOLGA6L10A0A0M3HER8 536 aa12.14□□□□□ -0.47
MRPL55-209ENST00000366735 KLHL33A6NCF5 533 aa12.14□□□□□ -0.47
MRPL55-209ENST00000366735 TLCD2A6NGC4 264 aa12.14□□□□□ -0.47
MRPL55-209ENST00000366735 MTX2O75431 263 aa12.14□□□□□ -0.47
MRPL55-209ENST00000366735 KRT1P04264 644 aa12.14□□□□□ -0.47
MRPL55-209ENST00000366735 F8A1P23610 371 aa12.14□□□□□ -0.47
MRPL55-209ENST00000366735 HMGCLP35914 325 aa12.14□□□□□ -0.47
MRPL55-209ENST00000366735 SPAM1P38567 509 aa12.14□□□□□ -0.47
MRPL55-209ENST00000366735 DRG2P55039 364 aaKnown RBP12.14□□□□□ -0.47
MRPL55-209ENST00000366735 DMPKQ09013 629 aa12.14□□□□□ -0.47
MRPL55-209ENST00000366735 TMEM115Q12893 351 aaPredicted RBP12.14□□□□□ -0.47
MRPL55-209ENST00000366735 CYP1B1Q16678 543 aa12.14□□□□□ -0.47
MRPL55-209ENST00000366735 LDLRAP1Q5SW96 308 aa12.14□□□□□ -0.47
MRPL55-209ENST00000366735 ARMC6Q6NXE6 501 aa12.14□□□□□ -0.47
MRPL55-209ENST00000366735 AMZ2Q86W34 360 aa12.14□□□□□ -0.47
MRPL55-209ENST00000366735 OOSP2Q86WS3 158 aa12.14□□□□□ -0.47
MRPL55-209ENST00000366735 RFX6Q8HWS3 928 aa12.14□□□□□ -0.47
MRPL55-209ENST00000366735 CNTD1Q8N815 330 aa12.14□□□□□ -0.47
MRPL55-209ENST00000366735 OR8K5Q8NH50 307 aa12.14□□□□□ -0.47
MRPL55-209ENST00000366735 EID2BQ96D98 161 aa12.14□□□□□ -0.47
MRPL55-209ENST00000366735 CEP41Q9BYV8 373 aa12.14□□□□□ -0.47
MRPL55-209ENST00000366735 ACTL8Q9H568 366 aa12.14□□□□□ -0.47
MRPL55-209ENST00000366735 LRRC4CQ9HCJ2 640 aa12.14□□□□□ -0.47
MRPL55-209ENST00000366735 SLC23A2Q9UGH3 650 aa12.14□□□□□ -0.47
MRPL55-209ENST00000366735 PLAAQ9Y263 795 aa12.14□□□□□ -0.47
MRPL55-209ENST00000366735 EFR3BQ9Y2G0 817 aa12.14□□□□□ -0.47
MRPL55-209ENST00000366735 PKP3Q9Y446 797 aa12.14□□□□□ -0.47
MRPL55-209ENST00000366735 UBA6A0AVT1 1052 aaPredicted RBP12.13□□□□□ -0.47
MRPL55-209ENST00000366735 MTSS1O43312 755 aa12.13□□□□□ -0.47
MRPL55-209ENST00000366735 CPNE3O75131 537 aaKnown RBP12.13□□□□□ -0.47
MRPL55-209ENST00000366735 BRAFP15056 766 aa12.13□□□□□ -0.47
MRPL55-209ENST00000366735 H2AFXP16104 143 aaPredicted RBP12.13□□□□□ -0.47
MRPL55-209ENST00000366735 MCM3P25205 808 aa12.13□□□□□ -0.47
MRPL55-209ENST00000366735 SERPINB4P48594 390 aa12.13□□□□□ -0.47
MRPL55-209ENST00000366735 PGDP52209 483 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms