RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 ITGB6P18564 788 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 PSMC4P43686 418 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 LIG4P49917 911 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 MLLT10P55197 1068 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 SIRPAP78324 504 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 PITX1P78337 314 aaPredicted RBP4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 POU3F1Q03052 451 aaPredicted RBP4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 MBTD1Q05BQ5 628 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 PLA2G7Q13093 441 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 PDSS1Q5T2R2 415 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 GCNT6Q5T4J0 391 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 FAM109BQ6ICB4 259 aaPredicted RBP4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 NAA16Q6N069 864 aaPredicted RBP4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 C18orf65Q6ZTR6 163 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 DENND5BQ6ZUT9 1274 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 SMIM29Q86T20 159 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 LONP2Q86WA8 852 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 NR2C2APQ86WQ0 139 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 CRYBG2Q8N1P7 616 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 SLC24A4Q8NFF2 622 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 RDM1Q8NG50 284 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 ALG14Q96F25 216 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 ABHD8Q96I13 439 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 ZNF583Q96ND8 569 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 DGAT2Q96PD7 388 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 TRMT61BQ9BVS5 477 aaKnown RBP4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 CCDC106Q9BWC9 280 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 MRPL1Q9BYD6 325 aaKnown RBP4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 PELI2Q9HAT8 420 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 HHATLQ9HCP6 504 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 ZFP57Q9NU63 452 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 OSER1Q9NX31 292 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 GDE1Q9NZC3 331 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 MORF4L1Q9UBU8 362 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 KCNG2Q9UJ96 466 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 PPIEQ9UNP9 301 aaKnown RBP4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 TRPV2Q9Y5S1 764 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 IGLV5-45A0A087WSX0 123 aa4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 DVL1O14640 695 aa4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 GPR137BO60478 399 aa4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 IGHV4-39P01824 125 aa4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 ATP1A1P05023 1023 aaKnown RBP4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 ABCB1P08183 1280 aaPredicted RBP4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 ACP2P11117 423 aa4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 CSF2RAP15509 400 aa4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 ZNF23P17027 643 aa4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 MCCP23508 829 aa4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 LMAN1P49257 510 aa4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 DVL1P1P54792 670 aaPredicted RBP4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 PNRC1Q12796 327 aaPredicted RBP4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 ZRSR1Q15695 479 aaKnown RBP4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 SNAPC1Q16533 368 aa4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 DUOXA1Q1HG43 343 aa4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 TMEM266Q2M3C6 531 aa4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 C6orf163Q5TEZ5 329 aa4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 KLC3Q6P597 504 aa4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 PACS1Q6VY07 963 aa4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 GDPD4Q6W3E5 623 aa4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 ANO5Q75V66 913 aa4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 PLPPR4Q7Z2D5 763 aa4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 ZNF595Q8IYB9 648 aa4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 ZBTB8BQ8NAP8 495 aaPredicted RBP4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 POGLUT1Q8NBL1 392 aa4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 DMBX1Q8NFW5 382 aa4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 DAZLQ92904 295 aaKnown RBP4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 SECISBP2LQ93073 1101 aaKnown RBP4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 ERP27Q96DN0 273 aa4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 NAF1Q96HR8 494 aaKnown RBP4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 C17orf77Q96MU5 243 aa4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 NEK1Q96PY6 1258 aa4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 SERINC2Q96SA4 455 aa4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 HAO2Q9NYQ3 351 aa4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 WWOXQ9NZC7 414 aa4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 NRBP1Q9UHY1 535 aa4.04□□□□□ -1.76
RNU6-560P-201ENST00000364007 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.03□□□□□ -1.76
RNU6-560P-201ENST00000364007 A0A0B4J293 547 aa4.03□□□□□ -1.76
RNU6-560P-201ENST00000364007 FEZF1A0PJY2 475 aa4.03□□□□□ -1.76
RNU6-560P-201ENST00000364007 SYNDIG1LA6NDD5 238 aa4.03□□□□□ -1.76
RNU6-560P-201ENST00000364007 BMPR1BO00238 502 aa4.03□□□□□ -1.76
RNU6-560P-201ENST00000364007 SPRY1O43609 319 aaPredicted RBP4.03□□□□□ -1.76
RNU6-560P-201ENST00000364007 PLOD3O60568 738 aa4.03□□□□□ -1.76
RNU6-560P-201ENST00000364007 LMX1BO60663 402 aa4.03□□□□□ -1.76
RNU6-560P-201ENST00000364007 PRAMEF11O60813 436 aa4.03□□□□□ -1.76
RNU6-560P-201ENST00000364007 KRT36O76013 467 aa4.03□□□□□ -1.76
RNU6-560P-201ENST00000364007 TOMM70O94826 608 aa4.03□□□□□ -1.76
RNU6-560P-201ENST00000364007 LDLRP01130 860 aa4.03□□□□□ -1.76
RNU6-560P-201ENST00000364007 CKMT2P17540 419 aa4.03□□□□□ -1.76
RNU6-560P-201ENST00000364007 MATR3P43243 847 aaKnown RBP eCLIP4.03□□□□□ -1.76
RNU6-560P-201ENST00000364007 PPP5CP53041 499 aa4.03□□□□□ -1.76
RNU6-560P-201ENST00000364007 TERF1P54274 439 aa4.03□□□□□ -1.76
RNU6-560P-201ENST00000364007 UBXN2AP68543 259 aa4.03□□□□□ -1.76
RNU6-560P-201ENST00000364007 CDK3Q00526 305 aa4.03□□□□□ -1.76
RNU6-560P-201ENST00000364007 AIMP1Q12904 312 aaKnown RBP4.03□□□□□ -1.76
RNU6-560P-201ENST00000364007 PRPF4BQ13523 1007 aaKnown RBP4.03□□□□□ -1.76
RNU6-560P-201ENST00000364007 IL11RAQ14626 422 aa4.03□□□□□ -1.76
RNU6-560P-201ENST00000364007 RBBP5Q15291 538 aaKnown RBP4.03□□□□□ -1.76
RNU6-560P-201ENST00000364007 KLHL22Q53GT1 634 aa4.03□□□□□ -1.76
RNU6-560P-201ENST00000364007 RPUSD3Q6P087 351 aaKnown RBP4.03□□□□□ -1.76
RNU6-560P-201ENST00000364007 FAM114A1Q8IWE2 563 aa4.03□□□□□ -1.76
RNU6-560P-201ENST00000364007 METTL27Q8N6F8 245 aaPredicted RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms