RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 SOHLH2Q9NX45 425 aa20.58■□□□□ 0.89
CD47-202ENST00000361309 HACD3Q9P035 362 aa20.58■□□□□ 0.89
CD47-202ENST00000361309 LUZP4Q9P127 313 aa20.58■□□□□ 0.89
CD47-202ENST00000361309 SLC24A2Q9UI40 661 aa20.58■□□□□ 0.89
CD47-202ENST00000361309 SNX7Q9UNH6 387 aa20.58■□□□□ 0.89
CD47-202ENST00000361309 FER1L5A0AVI2 2057 aa20.58■□□□□ 0.88
CD47-202ENST00000361309 DDX3YO15523 660 aaKnown RBP20.57■□□□□ 0.88
CD47-202ENST00000361309 CEACAM4O75871 244 aa20.57■□□□□ 0.88
CD47-202ENST00000361309 EPOP01588 193 aa20.57■□□□□ 0.88
CD47-202ENST00000361309 RAB40ALP0C0E4 278 aa20.57■□□□□ 0.88
CD47-202ENST00000361309 AKT1P31749 480 aa20.57■□□□□ 0.88
CD47-202ENST00000361309 HNRNPH3P31942 346 aaKnown RBP20.57■□□□□ 0.88
CD47-202ENST00000361309 ARHGAP25P42331 645 aa20.57■□□□□ 0.88
CD47-202ENST00000361309 TNNT3P45378 269 aaPredicted RBP20.57■□□□□ 0.88
CD47-202ENST00000361309 GSDMDP57764 484 aa20.57■□□□□ 0.88
CD47-202ENST00000361309 WASHC5Q12768 1159 aa20.57■□□□□ 0.88
CD47-202ENST00000361309 LONRF2Q1L5Z9 754 aa20.57■□□□□ 0.88
CD47-202ENST00000361309 ASTE1Q2TB18 679 aaPredicted RBP20.57■□□□□ 0.88
CD47-202ENST00000361309 FAM69BQ5VUD6 431 aa20.57■□□□□ 0.88
CD47-202ENST00000361309 JMJD6Q6NYC1 403 aaPredicted RBP20.57■□□□□ 0.88
CD47-202ENST00000361309 MFSD7Q6UXD7 560 aa20.57■□□□□ 0.88
CD47-202ENST00000361309 DSELQ8IZU8 1212 aa20.57■□□□□ 0.88
CD47-202ENST00000361309 FDCSPQ8NFU4 85 aa20.57■□□□□ 0.88
CD47-202ENST00000361309 SPDYE1Q8NFV5 336 aaPredicted RBP20.57■□□□□ 0.88
CD47-202ENST00000361309 NAT14Q8WUY8 206 aa20.57■□□□□ 0.88
CD47-202ENST00000361309 TFB1MQ8WVM0 346 aaKnown RBP20.57■□□□□ 0.88
CD47-202ENST00000361309 ZFPM2Q8WW38 1151 aa20.57■□□□□ 0.88
CD47-202ENST00000361309 MRGPRX2Q96LB1 330 aa20.57■□□□□ 0.88
CD47-202ENST00000361309 LRFN5Q96NI6 719 aa20.57■□□□□ 0.88
CD47-202ENST00000361309 TLR10Q9BXR5 811 aa20.57■□□□□ 0.88
CD47-202ENST00000361309 MFRPQ9BY79 579 aa20.57■□□□□ 0.88
CD47-202ENST00000361309 KIR3DX1Q9H7L2 352 aa20.57■□□□□ 0.88
CD47-202ENST00000361309 CELSR2Q9HCU4 2923 aa20.57■□□□□ 0.88
CD47-202ENST00000361309 CUEDC1Q9NWM3 386 aaPredicted RBP20.57■□□□□ 0.88
CD47-202ENST00000361309 FAM8A1Q9UBU6 413 aa20.57■□□□□ 0.88
CD47-202ENST00000361309 BTRCQ9Y297 605 aa20.57■□□□□ 0.88
CD47-202ENST00000361309 PKP3Q9Y446 797 aa20.57■□□□□ 0.88
CD47-202ENST00000361309 PCDHGB7Q9Y5F8 929 aa20.57■□□□□ 0.88
CD47-202ENST00000361309 MGAT4DA6NG13 374 aa20.56■□□□□ 0.88
CD47-202ENST00000361309 TCP11X1B4DZS4 312 aa20.56■□□□□ 0.88
CD47-202ENST00000361309 MEN1O00255 615 aa20.56■□□□□ 0.88
CD47-202ENST00000361309 ZNF185O15231 689 aa20.56■□□□□ 0.88
CD47-202ENST00000361309 DPM1O60762 260 aa20.56■□□□□ 0.88
CD47-202ENST00000361309 TMEM63AO94886 807 aa20.56■□□□□ 0.88
CD47-202ENST00000361309 TNNT1P13805 278 aa20.56■□□□□ 0.88
CD47-202ENST00000361309 MSH3P20585 1137 aa20.56■□□□□ 0.88
CD47-202ENST00000361309 ABRQ12979 859 aa20.56■□□□□ 0.88
CD47-202ENST00000361309 PTPRCAPQ14761 206 aa20.56■□□□□ 0.88
CD47-202ENST00000361309 SLC1A5Q15758 541 aa20.56■□□□□ 0.88
CD47-202ENST00000361309 EIF2S3LQ2VIR3 472 aaKnown RBP20.56■□□□□ 0.88
CD47-202ENST00000361309 LRRC38Q5VT99 294 aa20.56■□□□□ 0.88
CD47-202ENST00000361309 RHOT1Q8IXI2 618 aa20.56■□□□□ 0.88
CD47-202ENST00000361309 CARFQ8N187 725 aa20.56■□□□□ 0.88
CD47-202ENST00000361309 Q8NA96 180 aa20.56■□□□□ 0.88
CD47-202ENST00000361309 CPT1BQ92523 772 aa20.56■□□□□ 0.88
CD47-202ENST00000361309 NUDT9Q9BW91 350 aa20.56■□□□□ 0.88
CD47-202ENST00000361309 DEF6Q9H4E7 631 aa20.56■□□□□ 0.88
CD47-202ENST00000361309 CASS4Q9NQ75 786 aa20.56■□□□□ 0.88
CD47-202ENST00000361309 IFNKQ9P0W0 207 aa20.56■□□□□ 0.88
CD47-202ENST00000361309 TCFL5Q9UL49 500 aa20.56■□□□□ 0.88
CD47-202ENST00000361309 ACSL5Q9ULC5 683 aa20.56■□□□□ 0.88
CD47-202ENST00000361309 PCSK5Q92824 1860 aa20.56■□□□□ 0.88
CD47-202ENST00000361309 MDC1Q14676 2089 aaKnown RBP20.55■□□□□ 0.88
CD47-202ENST00000361309 A1L4Q6 167 aa20.55■□□□□ 0.88
CD47-202ENST00000361309 A6NL46 340 aa20.55■□□□□ 0.88
CD47-202ENST00000361309 LCA5LO95447 670 aa20.55■□□□□ 0.88
CD47-202ENST00000361309 PECAM1P16284 738 aaPredicted RBP20.55■□□□□ 0.88
CD47-202ENST00000361309 POLR2CP19387 275 aaPredicted RBP20.55■□□□□ 0.88
CD47-202ENST00000361309 NR2C2P49116 596 aa20.55■□□□□ 0.88
CD47-202ENST00000361309 ITGA1P56199 1179 aa20.55■□□□□ 0.88
CD47-202ENST00000361309 MRPL49Q13405 166 aaKnown RBP20.55■□□□□ 0.88
CD47-202ENST00000361309 BZW1Q7L1Q6 419 aaKnown RBP20.55■□□□□ 0.88
CD47-202ENST00000361309 IPMKQ8NFU5 416 aa20.55■□□□□ 0.88
CD47-202ENST00000361309 OR4E2Q8NGC2 313 aa20.55■□□□□ 0.88
CD47-202ENST00000361309 OR2L2Q8NH16 312 aa20.55■□□□□ 0.88
CD47-202ENST00000361309 ZNF398Q8TD17 642 aa20.55■□□□□ 0.88
CD47-202ENST00000361309 CLIP3Q96DZ5 547 aa20.55■□□□□ 0.88
CD47-202ENST00000361309 OXNAD1Q96HP4 312 aaPredicted RBP20.55■□□□□ 0.88
CD47-202ENST00000361309 NLNQ9BYT8 704 aa20.55■□□□□ 0.88
CD47-202ENST00000361309 FANCEQ9HB96 536 aa20.55■□□□□ 0.88
CD47-202ENST00000361309 SLAMF7Q9NQ25 335 aa20.55■□□□□ 0.88
CD47-202ENST00000361309 SMOXQ9NWM0 555 aa20.55■□□□□ 0.88
CD47-202ENST00000361309 DDX56Q9NY93 547 aaKnown RBP20.55■□□□□ 0.88
CD47-202ENST00000361309 MAP10Q9P2G4 905 aa20.55■□□□□ 0.88
CD47-202ENST00000361309 KLHL8Q9P2G9 620 aaPredicted RBP20.55■□□□□ 0.88
CD47-202ENST00000361309 HYOU1Q9Y4L1 999 aa20.55■□□□□ 0.88
CD47-202ENST00000361309 DOPEY1Q5JWR5 2465 aa20.55■□□□□ 0.88
CD47-202ENST00000361309 ANKRD12Q6UB98 2062 aa20.54■□□□□ 0.88
CD47-202ENST00000361309 SSU72P8A0A1W2PR75 194 aa20.54■□□□□ 0.88
CD47-202ENST00000361309 SLC9B1P1A6NJY1 282 aa20.54■□□□□ 0.88
CD47-202ENST00000361309 SLC35G4P0C7Q5 338 aa20.54■□□□□ 0.88
CD47-202ENST00000361309 HLA-DPA1P20036 260 aa20.54■□□□□ 0.88
CD47-202ENST00000361309 CDH3P22223 829 aa20.54■□□□□ 0.88
CD47-202ENST00000361309 RORAP35398 523 aa20.54■□□□□ 0.88
CD47-202ENST00000361309 LLGL1Q15334 1064 aa20.54■□□□□ 0.88
CD47-202ENST00000361309 PID1Q7Z2X4 250 aa20.54■□□□□ 0.88
CD47-202ENST00000361309 RBMXL3Q8N7X1 1067 aaKnown RBP20.54■□□□□ 0.88
CD47-202ENST00000361309 RMDN2Q96LZ7 410 aa20.54■□□□□ 0.88
CD47-202ENST00000361309 FCRL5Q96RD9 977 aa20.54■□□□□ 0.88
CD47-202ENST00000361309 POMT2Q9UKY4 750 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms