RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 PSMD8P48556 350 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 GPR15P49685 360 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 SLC12A2P55011 1212 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 CRHR2Q13324 411 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 CEACAM7Q14002 265 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 LRRC36Q1X8D7 754 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 HECTD2Q5U5R9 776 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 MARC1Q5VT66 337 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 AGAP9Q5VTM2 703 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 MFSD14CQ5VZR4 134 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 TMEM207Q6UWW9 146 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 ZNF354CQ86Y25 554 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 TMEM126BQ8IUX1 230 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 SCN4BQ8IWT1 228 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 COLGALT2Q8IYK4 626 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 CEP70Q8NHQ1 597 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 HMGCLL1Q8TB92 370 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 ARRDC2Q8TBH0 407 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 CCDC126Q96EE4 140 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 SGF29Q96ES7 293 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 FAM46AQ96IP4 442 aaKnown RBP7.26□□□□□ -1.25
CLCN3-202ENST00000360642 TRAPPC9Q96Q05 1148 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 DDX50Q9BQ39 737 aaKnown RBP7.26□□□□□ -1.25
CLCN3-202ENST00000360642 FBXO44Q9H4M3 255 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 EFCAB1Q9HAE3 211 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 TNFRSF12AQ9NP84 129 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 NT5MQ9NPB1 228 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 B3GALT1Q9Y5Z6 326 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 DRGXA6NNA5 263 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 ATXN1LP0C7T5 689 aaKnown RBP7.26□□□□□ -1.25
CLCN3-202ENST00000360642 HNRNPLP14866 589 aaKnown RBP eCLIP7.26□□□□□ -1.25
CLCN3-202ENST00000360642 VCLP18206 1134 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 XRCC1P18887 633 aaPredicted RBP7.26□□□□□ -1.25
CLCN3-202ENST00000360642 SLC26A3P40879 764 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 INHBEP58166 350 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 MAXP61244 160 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 MS4A2Q01362 244 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 PSMD5Q16401 504 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 FRMPD3Q5JV73 1810 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 CLLU1OSQ5K130 101 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 SDHAF4Q5VUM1 108 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 TFAP2DQ7Z6R9 452 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 DCP1BQ8IZD4 617 aaKnown RBP7.26□□□□□ -1.25
CLCN3-202ENST00000360642 PQLC1Q8N2U9 271 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 PGBD5Q8N414 524 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 ANKRD49Q8WVL7 239 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 EZH1Q92800 747 aaPredicted RBP7.26□□□□□ -1.25
CLCN3-202ENST00000360642 IGSF8Q969P0 613 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 MARK4Q96L34 752 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 KLHL5Q96PQ7 755 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 BTBD9Q96Q07 612 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 MFSD1Q9H3U5 465 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 WDR41Q9HAD4 459 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 SPATS2LQ9NUQ6 558 aaKnown RBP7.26□□□□□ -1.25
CLCN3-202ENST00000360642 UTP6Q9NYH9 597 aaKnown RBP7.26□□□□□ -1.25
CLCN3-202ENST00000360642 PACSIN3Q9UKS6 424 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 GABRQQ9UN88 632 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 VWA7Q9Y334 891 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 POM121BA6NF01 834 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 ACOT8O14734 319 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 LDB2O43679 373 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 BCAS2O75934 225 aaPredicted RBP7.25□□□□□ -1.25
CLCN3-202ENST00000360642 FESP07332 822 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 RBP1P09455 135 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 CCDC166P0CW27 439 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 CST5P28325 142 aaPredicted RBP7.25□□□□□ -1.25
CLCN3-202ENST00000360642 INHBCP55103 352 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 C1QTNF8P60827 252 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 DSC2Q02487 901 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 ACVR1Q04771 509 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 PMS2P11Q13670 270 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 PTK2BQ14289 1009 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 TRIP10Q15642 601 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 GPR19Q15760 415 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 SIRPB2Q5JXA9 342 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 MAP3K21Q5TCX8 1036 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 ZFP1Q6P2D0 407 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 TICAM1Q8IUC6 712 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 ARHGAP18Q8N392 663 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 PSMG2Q969U7 264 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 TSPAN17Q96FV3 270 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 FAR2Q96K12 515 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 VRK1Q99986 396 aaPredicted RBP7.25□□□□□ -1.25
CLCN3-202ENST00000360642 FAM192AQ9GZU8 254 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 EML4Q9HC35 981 aaKnown RBP7.25□□□□□ -1.25
CLCN3-202ENST00000360642 TRMT13Q9NUP7 481 aaKnown RBP7.25□□□□□ -1.25
CLCN3-202ENST00000360642 SARDHQ9UL12 918 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 MIA3Q5JRA6 1907 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 HTRA2O43464 458 aaPredicted RBP7.25□□□□□ -1.25
CLCN3-202ENST00000360642 IGLV3-27P01718 113 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 ZCCHC18P0CG32 403 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 SYN1P17600 705 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 IMPDH1P20839 514 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 MAGEA11P43364 429 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 ALDH1A3P47895 512 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 KCNC1P48547 511 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 CDKN2DP55273 166 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 FAM189BP81408 668 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 TIAL1Q01085 375 aaKnown RBP eCLIP7.25□□□□□ -1.25
CLCN3-202ENST00000360642 CACNB2Q08289 660 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms