RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 H0YCG3 227 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 TLL1O43897 1013 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 CKBP12277 381 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 THPOP40225 353 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 MRPL28Q13084 256 aaKnown RBP9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 ACOX1Q15067 660 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 NFIL3Q16649 462 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 DUOXA2Q1HG44 320 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 ZNF699Q32M78 642 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 GPAT3Q53EU6 434 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 N4BP2L1Q5TBK1 243 aaPredicted RBP9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 ALKBH2Q6NS38 261 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 MFSD7Q6UXD7 560 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 PARP16Q8N5Y8 322 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 MAGEE2Q8TD90 523 aaPredicted RBP9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 RPL3LQ92901 407 aaKnown RBP9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 MOCOSQ96EN8 888 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 PPP1R2P1Q96PQ5 205 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 TNKS2Q9H2K2 1166 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 SMOC2Q9H3U7 446 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 SAV1Q9H4B6 383 aaPredicted RBP9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 CHRAC1Q9NRG0 131 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 TJP2Q9UDY2 1190 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 TEX264Q9Y6I9 313 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 HSPE1-MOB4S4R3N1 261 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 A0A0U1RQS6 177 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 OR6C70A6NIJ9 312 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 HACD1B0YJ81 288 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 ST8SIA5O15466 376 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 MSH3P20585 1137 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 HOXA11P31270 313 aaPredicted RBP9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 RPL22P35268 128 aaKnown RBP9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 PSMD8P48556 350 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 RABGGTBP53611 331 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 LTB4RQ15722 352 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 SGCAQ16586 387 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 IMPG1Q17R60 797 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 TBPL2Q6SJ96 375 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 KATNAL2Q8IYT4 538 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 PDIK1LQ8N165 341 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 ZNF557Q8N988 423 aaPredicted RBP9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 C1orf127Q8N9H9 656 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 ST13P5Q8NFI4 369 aaPredicted RBP9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 MCFD2Q8NI22 146 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 HASPINQ8TF76 798 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 AKAP1Q92667 903 aaKnown RBP eCLIP9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 RADILQ96JH8 1075 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 FOPNLQ96NB1 174 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 RPRD1AQ96P16 312 aaPredicted RBP9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 ZNF300Q96RE9 604 aaPredicted RBP9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 GAD1Q99259 594 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 TINAGL1Q9GZM7 467 aaPredicted RBP9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 FAM96AQ9H5X1 160 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 TMEM134Q9H6X4 195 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 LTB4R2Q9NPC1 389 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 ZNF224Q9NZL3 707 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 TRMT6Q9UJA5 497 aaKnown RBP9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 TSR3Q9UJK0 312 aaKnown RBP9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 AURKCQ9UQB9 309 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 C17orf102A2RUQ5 167 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 LINC00271P0C7V0 271 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 ITGB6P18564 788 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 CUL2Q13617 745 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 IRF3Q14653 427 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 SKIV2LQ15477 1246 aaKnown RBP9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 ZIK1Q3SY52 487 aaPredicted RBP9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 IQCCQ4KMZ1 466 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 ZBTB37Q5TC79 503 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 FAXCQ5TGI0 409 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 ZPBP2Q6X784 338 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 C12orf29Q8N999 325 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 ST8SIA4Q92187 359 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 ACSF2Q96CM8 615 aaPredicted RBP9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 RAD9AQ99638 391 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 CGRRF1Q99675 332 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 PPA2Q9H2U2 334 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 HPS4Q9NQG7 708 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 NECTIN3Q9NQS3 549 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 EMC3Q9P0I2 261 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 OSGIN1Q9UJX0 560 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 COPS3Q9UNS2 423 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 USTQ9Y2C2 406 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 MFHAS1Q9Y4C4 1052 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 MEIOCA2RUB1 952 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 KCNU1A8MYU2 1149 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 H3BQ06 376 aaPredicted RBP9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 NUPL2O15504 423 aaKnown RBP9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 PLIN3O60664 434 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 NBNO60934 754 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 RECQL4O94761 1208 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 PAPLNO95428 1278 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 RB1P06400 928 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 ADORA3P0DMS8 318 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 NPR3P17342 541 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 TGM2P21980 687 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 PROZP22891 400 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 PTX3P26022 381 aaPredicted RBP9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 PBX2P40425 430 aa9.18□□□□□ -0.94
SMARCAL1-202ENST00000358207 IL12RB1P42701 662 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms