RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 KRTCAP2Q8N6L1 136 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 ARRDC2Q8TBH0 407 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 FAR1Q8WVX9 515 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 MUL1Q969V5 352 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 MTFMTQ96DP5 389 aaKnown RBP10□□□□□ -0.81
PTPRA-203ENST00000356147 SPC25Q9HBM1 224 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 ARNT2Q9HBZ2 717 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 FARSBQ9NSD9 589 aaKnown RBP10□□□□□ -0.81
PTPRA-203ENST00000356147 COMMD8Q9NX08 183 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 VNN3Q9NY84 501 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 KIAA1522Q9P206 1035 aaPredicted RBP10□□□□□ -0.81
PTPRA-203ENST00000356147 PCTPQ9UKL6 214 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 CDH9Q9ULB4 789 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 ZNF99A8MXY4 864 aaPredicted RBP9.99□□□□□ -0.81
PTPRA-203ENST00000356147 KERAO60938 352 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 MYL3P08590 195 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 SLC2A4P14672 509 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 ZNF24P17028 368 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 GDF5P43026 501 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 ISL1P61371 349 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 RPL38P63173 70 aaKnown RBP9.99□□□□□ -0.81
PTPRA-203ENST00000356147 VAC14Q08AM6 782 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 SELENBP1Q13228 472 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 SYT16Q17RD7 645 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 AP5B1Q2VPB7 878 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 FAM174BQ3ZCQ3 159 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 TTC23Q5W5X9 447 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 CYP20A1Q6UW02 462 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 SPATA19Q7Z5L4 167 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 ZFAND4Q86XD8 727 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 PROSER1Q86XN7 944 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 PIANPQ8IYJ0 282 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 HDAC2Q92769 488 aaKnown RBP9.99□□□□□ -0.81
PTPRA-203ENST00000356147 KIAA1191Q96A73 305 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 RMDN1Q96DB5 314 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 CCDC97Q96F63 343 aaPredicted RBP9.99□□□□□ -0.81
PTPRA-203ENST00000356147 CDKN2AIPNLQ96HQ2 116 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 OSBPL10Q9BXB5 764 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 YTHDF1Q9BYJ9 559 aaKnown RBP9.99□□□□□ -0.81
PTPRA-203ENST00000356147 ATP13A1Q9HD20 1204 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 AMBNQ9NP70 447 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 PALMDQ9NP74 551 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 VTA1Q9NP79 307 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 ABI2Q9NYB9 513 aaPredicted RBP9.99□□□□□ -0.81
PTPRA-203ENST00000356147 HACD3Q9P035 362 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 MAGEL2Q9UJ55 1249 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 ZNF236Q9UL36 1845 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 FAM92AA1XBS5 289 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 FAM234BA2RU67 622 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 PRMT5O14744 637 aaPredicted RBP9.99□□□□□ -0.81
PTPRA-203ENST00000356147 FGF10O15520 208 aaPredicted RBP9.99□□□□□ -0.81
PTPRA-203ENST00000356147 NDUFS3O75489 264 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 UROSP10746 265 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 STC1P52823 247 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 MLLT6P55198 1093 aaPredicted RBP9.99□□□□□ -0.81
PTPRA-203ENST00000356147 CRY1Q16526 586 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 DUSP28Q4G0W2 176 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 RBM48Q5RL73 367 aaKnown RBP9.99□□□□□ -0.81
PTPRA-203ENST00000356147 ANKRD13BQ86YJ7 626 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 EFHBQ8N7U6 833 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 RORBQ92753 470 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 ISG20Q96AZ6 181 aaKnown RBP9.99□□□□□ -0.81
PTPRA-203ENST00000356147 LINGO1Q96FE5 620 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 NSMCE3Q96MG7 304 aa9.99□□□□□ -0.81
PTPRA-203ENST00000356147 TFB2MQ9H5Q4 396 aaKnown RBP9.99□□□□□ -0.81
PTPRA-203ENST00000356147 ARL5CA6NH57 179 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 MYO1GB0I1T2 1018 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 TBX1O43435 398 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 TLR5O60602 858 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 ANGPTL1O95841 491 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 IGLV3-25P01717 112 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 RPS17P08708 135 aaKnown RBP9.98□□□□□ -0.81
PTPRA-203ENST00000356147 PRR35P0CG20 571 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 MYCLP1P12525 358 aaPredicted RBP9.98□□□□□ -0.81
PTPRA-203ENST00000356147 GGT1P19440 569 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 PCMT1P22061 227 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 TGM1P22735 817 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 PCYT1AP49585 367 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 PPP2R2BQ00005 443 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 RAD51Q06609 339 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 ABRAXAS2Q15018 415 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 XKR7Q5GH72 579 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 SPANXN4Q5MJ08 99 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 PSAPL1Q6NUJ1 521 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 RNF19BQ6ZMZ0 732 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 CAPSLQ8WWF8 208 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 TAS2R13Q9NYV9 303 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 CAB39Q9Y376 341 aaPredicted RBP9.98□□□□□ -0.81
PTPRA-203ENST00000356147 PTCH2Q9Y6C5 1203 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 TNS1Q9HBL0 1735 aaKnown RBP9.98□□□□□ -0.81
PTPRA-203ENST00000356147 MOXD2PA6NHM9 499 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 RRN3P2A6NIE6 340 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 LSM1O15116 133 aaKnown RBP9.98□□□□□ -0.81
PTPRA-203ENST00000356147 GPR182O15218 404 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 RPP40O75818 363 aaKnown RBP9.98□□□□□ -0.81
PTPRA-203ENST00000356147 SEC24AO95486 1093 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 LCKP06239 509 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 GTF2E2P29084 291 aaKnown RBP9.98□□□□□ -0.81
PTPRA-203ENST00000356147 PCSK1P29120 753 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 GJA5P36382 358 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms