RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 PKDCCQ504Y2 493 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 FAM45AQ8TCE6 357 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 MZB1Q8WU39 189 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 TWIST2Q8WVJ9 160 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 GPR22Q99680 433 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 CENPOQ9BU64 300 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 TMEM30AQ9NV96 361 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 PCDH10Q9P2E7 1040 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 MARCH4Q9P2E8 410 aaPredicted RBP13.89□□□□□ -0.19
SREBF1-202ENST00000355815 TRPC4Q9UBN4 977 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 DNMT3LQ9UJW3 386 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 A0A0U1RQF3 1178 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 HAT1O14929 419 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 KRT6AP02538 564 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 TACR2P21452 398 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 AIF1P55008 147 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 IKBKEQ14164 716 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 TCEA2Q15560 299 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 SYTL3Q4VX76 610 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 SIRPB2Q5JXA9 342 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 EPGNQ6UW88 154 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 TMEM135Q86UB9 458 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 CACTIN-AS1Q8N1I8 211 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 CLDN19Q8N6F1 224 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 LRRC20Q8TCA0 184 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 GANCQ8TET4 914 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 NSUN5Q96P11 429 aaKnown RBP13.89□□□□□ -0.19
SREBF1-202ENST00000355815 TSSK3Q96PN8 268 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 GALPQ9UBC7 116 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 FCF1Q9Y324 198 aaKnown RBP13.89□□□□□ -0.19
SREBF1-202ENST00000355815 RGS10O43665 173 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 SLC22A3O75751 556 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 GSTT2P0CG29 244 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 GSTT2BP0CG30 244 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 GPC1P35052 558 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 ALDH9A1P49189 494 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 NIPAL4Q0D2K0 466 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 GK3PQ14409 553 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 LAPTM4AQ15012 233 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 ZBTB6Q15916 424 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 IZUMO1Q8IYV9 350 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 SLC34A3Q8N130 599 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 SIDT2Q8NBJ9 832 aaKnown RBP13.88□□□□□ -0.19
SREBF1-202ENST00000355815 PSD4Q8NDX1 1056 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 TNKS2Q9H2K2 1166 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 EVLQ9UI08 416 aaPredicted RBP13.88□□□□□ -0.19
SREBF1-202ENST00000355815 GJD2Q9UKL4 321 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 CEP290O15078 2479 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 SH3PXD2BA1X283 911 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 TRAFD1O14545 582 aaPredicted RBP13.88□□□□□ -0.19
SREBF1-202ENST00000355815 AXIN1O15169 862 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 SSNA1O43805 119 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 STAU1O95793 577 aaKnown RBP13.88□□□□□ -0.19
SREBF1-202ENST00000355815 ITGBL1O95965 494 aaPredicted RBP13.88□□□□□ -0.19
SREBF1-202ENST00000355815 CYBBP04839 570 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 POU2F1P14859 743 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 RHOQP17081 205 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 ITGALP20701 1170 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 CORO1AP31146 461 aaKnown RBP13.88□□□□□ -0.19
SREBF1-202ENST00000355815 NNMTP40261 264 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 UPP1Q16831 310 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 GPR65Q8IYL9 337 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 CPSF7Q8N684 471 aaKnown RBP13.88□□□□□ -0.19
SREBF1-202ENST00000355815 ZNF614Q8N883 585 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 MS4A4AQ96JQ5 239 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 HEPHQ9BQS7 1158 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 ARFGEF1Q9Y6D6 1849 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 OR4F21O95013 312 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 CDK4P11802 303 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 COL6A1P12109 1028 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 RXRGP48443 463 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 OR2B6P58173 313 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 TIFABQ6ZNK6 161 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 ANKRD46Q86W74 232 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 HCSTQ9UBK5 93 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 EIF2B4Q9UI10 523 aaKnown RBP13.88□□□□□ -0.19
SREBF1-202ENST00000355815 RAI2Q9Y5P3 530 aa13.88□□□□□ -0.19
SREBF1-202ENST00000355815 SMIM30A4D0T7 59 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 CDC7O00311 574 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 IFRD1O00458 451 aaPredicted RBP13.87□□□□□ -0.19
SREBF1-202ENST00000355815 FYNP06241 537 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 ZNF865P0CJ78 1059 aaPredicted RBP13.87□□□□□ -0.19
SREBF1-202ENST00000355815 MYL12AP19105 171 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 LPOP22079 712 aaPredicted RBP13.87□□□□□ -0.19
SREBF1-202ENST00000355815 PRKACGP22612 351 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 LAPTM5Q13571 262 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 TYSND1Q2T9J0 566 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 C1GALT1C1Q96EU7 318 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 DIRAS2Q96HU8 199 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 CRNNQ9UBG3 495 aaPredicted RBP13.87□□□□□ -0.19
SREBF1-202ENST00000355815 PSME2Q9UL46 239 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 PADI4Q9UM07 663 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 GTF2A1LQ9UNN4 478 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 MCM3APO60318 1980 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 PPP6CO00743 305 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 PENKP01210 267 aaPredicted RBP13.87□□□□□ -0.19
SREBF1-202ENST00000355815 GJA1P17302 382 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 IGFBP5P24593 272 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 HOXD12P35452 270 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 DGKEP52429 567 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms