RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 CYS1Q717R9 158 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 CCDC103Q8IW40 242 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 NDUFAF2Q8N183 169 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 MPP5Q8N3R9 675 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 TTC16Q8NEE8 873 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 MYADMQ96S97 322 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 TBL1YQ9BQ87 522 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 TTYH2Q9BSA4 534 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.98□□□□□ -0.81
SYNE1-203ENST00000354674 WDR55Q9H6Y2 383 aaPredicted RBP9.98□□□□□ -0.81
SYNE1-203ENST00000354674 ABCB8Q9NUT2 735 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 LOC285095A0A1B0GVY8 99 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 HEPACAM2A8MVW5 462 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 NEDD8-MDP1E9PL57 170 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 ASNA1O43681 348 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 SPAG6O75602 509 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 C1QAP02745 245 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 TP53P04637 393 aaPredicted RBP9.97□□□□□ -0.81
SYNE1-203ENST00000354674 CYP17A1P05093 508 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 PTGS2P35354 604 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 MTHFRP42898 656 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 NPY2RP49146 381 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 MAXP61244 160 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 DMC1Q14565 340 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 PITRM1Q5JRX3 1037 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 NXNQ6DKJ4 435 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 ZCCHC8Q6NZY4 707 aaKnown RBP9.97□□□□□ -0.81
SYNE1-203ENST00000354674 ZBTB49Q6ZSB9 765 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 GALNT13Q8IUC8 556 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 CPSF7Q8N684 471 aaKnown RBP9.97□□□□□ -0.81
SYNE1-203ENST00000354674 CATSPER1Q8NEC5 780 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 OR52K1Q8NGK4 314 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 DCAKDQ8WVC6 231 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 RIPOR3Q96MK2 946 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 ZNF778Q96MU6 729 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 NPLQ9BXD5 320 aaPredicted RBP9.97□□□□□ -0.81
SYNE1-203ENST00000354674 BEX2Q9BXY8 128 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 UBP1Q9NZI7 540 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 SLC17A6Q9P2U8 582 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 LHX3Q9UBR4 397 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 FETUBQ9UGM5 382 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 V9GYQ6 96 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 CISD3P0C7P0 127 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 COX4I1P13073 169 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 ZNF26P17031 533 aaPredicted RBP9.97□□□□□ -0.81
SYNE1-203ENST00000354674 CDH17Q12864 832 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 ZNF235Q14590 738 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 GAB4Q2WGN9 574 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 FUT11Q495W5 492 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 BROXQ5VW32 411 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 ATG16L1Q676U5 607 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 TANGO2Q6ICL3 276 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 UGT3A1Q6NUS8 523 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 VITQ6UXI7 678 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 SMRP1Q8NCR6 262 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 SUSD6Q92537 303 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 MED30Q96HR3 178 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 APOPT1Q96IL0 206 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 TMEM246Q9BRR3 403 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 CINPQ9BW66 212 aaPredicted RBP9.97□□□□□ -0.81
SYNE1-203ENST00000354674 RIC8BQ9NVN3 520 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 ANKMY1Q9P2S6 941 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 AURKCQ9UQB9 309 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 POLHQ9Y253 713 aa9.97□□□□□ -0.81
SYNE1-203ENST00000354674 SNTNA6NMZ2 147 aa9.96□□□□□ -0.81
SYNE1-203ENST00000354674 hCG_2039718K7EN88 272 aa9.96□□□□□ -0.81
SYNE1-203ENST00000354674 AKAP10O43572 662 aa9.96□□□□□ -0.81
SYNE1-203ENST00000354674 ZNF821O75541 412 aaPredicted RBP9.96□□□□□ -0.81
SYNE1-203ENST00000354674 EPOP01588 193 aa9.96□□□□□ -0.81
SYNE1-203ENST00000354674 CD86P42081 329 aa9.96□□□□□ -0.81
SYNE1-203ENST00000354674 RGRP47804 291 aa9.96□□□□□ -0.81
SYNE1-203ENST00000354674 SERPINH1P50454 418 aaKnown RBP9.96□□□□□ -0.81
SYNE1-203ENST00000354674 VASPP50552 380 aaPredicted RBP9.96□□□□□ -0.81
SYNE1-203ENST00000354674 WNT3AP56704 352 aa9.96□□□□□ -0.81
SYNE1-203ENST00000354674 CEACAM7Q14002 265 aa9.96□□□□□ -0.81
SYNE1-203ENST00000354674 FRG1Q14331 258 aaKnown RBP9.96□□□□□ -0.81
SYNE1-203ENST00000354674 TMEM198Q66K66 360 aa9.96□□□□□ -0.81
SYNE1-203ENST00000354674 RETSATQ6NUM9 610 aa9.96□□□□□ -0.81
SYNE1-203ENST00000354674 METTL3Q86U44 580 aaKnown RBP9.96□□□□□ -0.81
SYNE1-203ENST00000354674 MFSD6LQ8IWD5 586 aa9.96□□□□□ -0.81
SYNE1-203ENST00000354674 ETFBKMTQ8IXQ9 262 aa9.96□□□□□ -0.81
SYNE1-203ENST00000354674 ZCCHC7Q8N3Z6 543 aaKnown RBP9.96□□□□□ -0.81
SYNE1-203ENST00000354674 LSMEM1Q8N8F7 131 aa9.96□□□□□ -0.81
SYNE1-203ENST00000354674 ABHD11Q8NFV4 315 aa9.96□□□□□ -0.81
SYNE1-203ENST00000354674 ELSPBP1Q96BH3 223 aa9.96□□□□□ -0.81
SYNE1-203ENST00000354674 RCN3Q96D15 328 aa9.96□□□□□ -0.81
SYNE1-203ENST00000354674 NPAS2Q99743 824 aa9.96□□□□□ -0.81
SYNE1-203ENST00000354674 SEMA3CQ99985 751 aa9.96□□□□□ -0.81
SYNE1-203ENST00000354674 NAT9Q9BTE0 207 aa9.96□□□□□ -0.81
SYNE1-203ENST00000354674 CHID1Q9BWS9 393 aa9.96□□□□□ -0.81
SYNE1-203ENST00000354674 CLDND1Q9NY35 253 aa9.96□□□□□ -0.81
SYNE1-203ENST00000354674 CXorf49A8MYA2 514 aaPredicted RBP9.96□□□□□ -0.82
SYNE1-203ENST00000354674 SOCS2O14508 198 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 GJB3O75712 270 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 CCNKO75909 580 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 TGDSO95455 350 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 KRT8P05787 483 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 LAMP2P13473 410 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 GFAPP14136 432 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 MGAT1P26572 445 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms