RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 ATP6V1B2P21281 511 aa15.29■□□□□ 0.04
MBD1-205ENST00000353909 ZNF77Q15935 545 aa15.29■□□□□ 0.04
MBD1-205ENST00000353909 GSTA3Q16772 222 aa15.29■□□□□ 0.04
MBD1-205ENST00000353909 TIGD2Q4W5G0 525 aa15.29■□□□□ 0.04
MBD1-205ENST00000353909 RFTN2Q52LD8 501 aaPredicted RBP15.29■□□□□ 0.04
MBD1-205ENST00000353909 SLC44A4Q53GD3 710 aa15.29■□□□□ 0.04
MBD1-205ENST00000353909 SAMD4BQ5PRF9 694 aaKnown RBP15.29■□□□□ 0.04
MBD1-205ENST00000353909 TMEM240Q5SV17 173 aa15.29■□□□□ 0.04
MBD1-205ENST00000353909 SERPINA13PQ6UXR4 307 aa15.29■□□□□ 0.04
MBD1-205ENST00000353909 HACD2Q6Y1H2 254 aa15.29■□□□□ 0.04
MBD1-205ENST00000353909 VRK3Q8IV63 474 aa15.29■□□□□ 0.04
MBD1-205ENST00000353909 TMEM102Q8N9M5 508 aaPredicted RBP15.29■□□□□ 0.04
MBD1-205ENST00000353909 PROKR1Q8TCW9 393 aa15.29■□□□□ 0.04
MBD1-205ENST00000353909 PPP2R3CQ969Q6 453 aa15.29■□□□□ 0.04
MBD1-205ENST00000353909 RHBDF1Q96CC6 855 aa15.29■□□□□ 0.04
MBD1-205ENST00000353909 LRRC58Q96CX6 371 aa15.29■□□□□ 0.04
MBD1-205ENST00000353909 DCUN1D1Q96GG9 259 aa15.29■□□□□ 0.04
MBD1-205ENST00000353909 COPS8Q99627 209 aa15.29■□□□□ 0.04
MBD1-205ENST00000353909 CPEB1Q9BZB8 566 aaKnown RBP15.29■□□□□ 0.04
MBD1-205ENST00000353909 EYSQ5T1H1 3165 aa15.29■□□□□ 0.04
MBD1-205ENST00000353909 LYNP07948 512 aa15.28■□□□□ 0.04
MBD1-205ENST00000353909 LINGO3P0C6S8 592 aa15.28■□□□□ 0.04
MBD1-205ENST00000353909 NSG1P42857 185 aa15.28■□□□□ 0.04
MBD1-205ENST00000353909 SPINT3P49223 89 aa15.28■□□□□ 0.04
MBD1-205ENST00000353909 ERVK-8P63133 956 aa15.28■□□□□ 0.04
MBD1-205ENST00000353909 HSPA14Q0VDF9 509 aa15.28■□□□□ 0.04
MBD1-205ENST00000353909 RCAN2Q14206 197 aa15.28■□□□□ 0.04
MBD1-205ENST00000353909 ZNF648Q5T619 568 aaPredicted RBP15.28■□□□□ 0.04
MBD1-205ENST00000353909 ZFP1Q6P2D0 407 aa15.28■□□□□ 0.04
MBD1-205ENST00000353909 RBM23Q86U06 439 aaKnown RBP15.28■□□□□ 0.04
MBD1-205ENST00000353909 ROPN1LQ96C74 230 aa15.28■□□□□ 0.04
MBD1-205ENST00000353909 RAD9AQ99638 391 aa15.28■□□□□ 0.04
MBD1-205ENST00000353909 ACTL8Q9H568 366 aa15.28■□□□□ 0.04
MBD1-205ENST00000353909 ZDHHC3Q9NYG2 299 aa15.28■□□□□ 0.04
MBD1-205ENST00000353909 VPS4BO75351 444 aa15.28■□□□□ 0.04
MBD1-205ENST00000353909 LEFTY1O75610 366 aa15.28■□□□□ 0.04
MBD1-205ENST00000353909 SLC22A3O75751 556 aa15.28■□□□□ 0.04
MBD1-205ENST00000353909 S100BP04271 92 aaPredicted RBP15.28■□□□□ 0.04
MBD1-205ENST00000353909 UQCRBP14927 111 aa15.28■□□□□ 0.04
MBD1-205ENST00000353909 RHDQ02161 417 aa15.28■□□□□ 0.04
MBD1-205ENST00000353909 SPATA19Q7Z5L4 167 aa15.28■□□□□ 0.04
MBD1-205ENST00000353909 LRTOMTQ8WZ04 291 aa15.28■□□□□ 0.04
MBD1-205ENST00000353909 WWOXQ9NZC7 414 aa15.28■□□□□ 0.04
MBD1-205ENST00000353909 FAM8A1Q9UBU6 413 aa15.28■□□□□ 0.04
MBD1-205ENST00000353909 TNPO3Q9Y5L0 923 aaKnown RBP15.28■□□□□ 0.04
MBD1-205ENST00000353909 A0A1W2PP18 115 aa15.27■□□□□ 0.04
MBD1-205ENST00000353909 BBIP1A8MTZ0 92 aa15.27■□□□□ 0.04
MBD1-205ENST00000353909 TXNDC9O14530 226 aa15.27■□□□□ 0.04
MBD1-205ENST00000353909 RSL1D1O76021 490 aaKnown RBP15.27■□□□□ 0.04
MBD1-205ENST00000353909 CTSLP07711 333 aa15.27■□□□□ 0.04
MBD1-205ENST00000353909 G6PDP11413 515 aa15.27■□□□□ 0.04
MBD1-205ENST00000353909 CEBPBP17676 345 aa15.27■□□□□ 0.04
MBD1-205ENST00000353909 ARHGEF7Q14155 803 aa15.27■□□□□ 0.04
MBD1-205ENST00000353909 ATP6AP1LQ52LC2 224 aa15.27■□□□□ 0.04
MBD1-205ENST00000353909 TCEAL5Q5H9L2 206 aa15.27■□□□□ 0.04
MBD1-205ENST00000353909 GDPD4Q6W3E5 623 aa15.27■□□□□ 0.04
MBD1-205ENST00000353909 Q6ZVL8 140 aa15.27■□□□□ 0.04
MBD1-205ENST00000353909 HSD11B1LQ7Z5J1 315 aa15.27■□□□□ 0.04
MBD1-205ENST00000353909 MILR1Q7Z6M3 343 aa15.27■□□□□ 0.04
MBD1-205ENST00000353909 IFNEQ86WN2 208 aa15.27■□□□□ 0.04
MBD1-205ENST00000353909 GALNT4Q8N4A0 578 aa15.27■□□□□ 0.04
MBD1-205ENST00000353909 TMEM74Q96NL1 305 aa15.27■□□□□ 0.04
MBD1-205ENST00000353909 CD244Q9BZW8 370 aa15.27■□□□□ 0.04
MBD1-205ENST00000353909 BRINP2Q9C0B6 783 aa15.27■□□□□ 0.04
MBD1-205ENST00000353909 INTS7Q9NVH2 962 aaKnown RBP15.27■□□□□ 0.04
MBD1-205ENST00000353909 EPS15L1Q9UBC2 864 aa15.27■□□□□ 0.04
MBD1-205ENST00000353909 USP22Q9UPT9 525 aa15.27■□□□□ 0.04
MBD1-205ENST00000353909 RNF11Q9Y3C5 154 aa15.27■□□□□ 0.04
MBD1-205ENST00000353909 AP4S1Q9Y587 144 aa15.27■□□□□ 0.04
MBD1-205ENST00000353909 CROCCQ5TZA2 2017 aa15.27■□□□□ 0.04
MBD1-205ENST00000353909 ZNF839A8K0R7 811 aa15.27■□□□□ 0.03
MBD1-205ENST00000353909 LSM1O15116 133 aaKnown RBP15.27■□□□□ 0.03
MBD1-205ENST00000353909 C8BP07358 591 aa15.27■□□□□ 0.03
MBD1-205ENST00000353909 GRIA3P42263 894 aa15.27■□□□□ 0.03
MBD1-205ENST00000353909 HMGCS1Q01581 520 aa15.27■□□□□ 0.03
MBD1-205ENST00000353909 FOLH1Q04609 750 aa15.27■□□□□ 0.03
MBD1-205ENST00000353909 NR6A1Q15406 480 aa15.27■□□□□ 0.03
MBD1-205ENST00000353909 SGO1Q5FBB7 561 aa15.27■□□□□ 0.03
MBD1-205ENST00000353909 ARSIQ5FYB1 569 aa15.27■□□□□ 0.03
MBD1-205ENST00000353909 OR52E8Q6IFG1 317 aa15.27■□□□□ 0.03
MBD1-205ENST00000353909 CAPRIN2Q6IMN6 1127 aaKnown RBP15.27■□□□□ 0.03
MBD1-205ENST00000353909 TICAM1Q8IUC6 712 aa15.27■□□□□ 0.03
MBD1-205ENST00000353909 KIAA2013Q8IYS2 634 aa15.27■□□□□ 0.03
MBD1-205ENST00000353909 BEND7Q8N7W2 519 aaPredicted RBP15.27■□□□□ 0.03
MBD1-205ENST00000353909 FRS2Q8WU20 508 aa15.27■□□□□ 0.03
MBD1-205ENST00000353909 MRGPRX3Q96LB0 322 aa15.27■□□□□ 0.03
MBD1-205ENST00000353909 ABCD2Q9UBJ2 740 aa15.27■□□□□ 0.03
MBD1-205ENST00000353909 BCAP29Q9UHQ4 241 aa15.27■□□□□ 0.03
MBD1-205ENST00000353909 ERVW-1Q9UQF0 538 aa15.27■□□□□ 0.03
MBD1-205ENST00000353909 PEX1O43933 1283 aa15.26■□□□□ 0.03
MBD1-205ENST00000353909 ETV3P41162 512 aa15.26■□□□□ 0.03
MBD1-205ENST00000353909 KCNK10P57789 538 aa15.26■□□□□ 0.03
MBD1-205ENST00000353909 PLIN5Q00G26 463 aa15.26■□□□□ 0.03
MBD1-205ENST00000353909 TLR1Q15399 786 aa15.26■□□□□ 0.03
MBD1-205ENST00000353909 PRSS36Q5K4E3 855 aa15.26■□□□□ 0.03
MBD1-205ENST00000353909 LYPLAL1Q5VWZ2 237 aa15.26■□□□□ 0.03
MBD1-205ENST00000353909 MINDY1Q8N5J2 469 aa15.26■□□□□ 0.03
MBD1-205ENST00000353909 SP7Q8TDD2 431 aaPredicted RBP15.26■□□□□ 0.03
MBD1-205ENST00000353909 SKA2Q8WVK7 121 aaPredicted RBP15.26■□□□□ 0.03
MBD1-205ENST00000353909 CANT1Q8WVQ1 401 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms