RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 DNAJC10Q8IXB1 793 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 ABI1Q8IZP0 508 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 SPATA6LQ8N4H0 392 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 TOMM5Q8N4H5 51 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 SLC7A14Q8TBB6 771 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 ZNF578Q96N58 590 aaPredicted RBP4.98□□□□□ -1.61
SKP1-202ENST00000353411 PNMA5Q96PV4 448 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 ABCG8Q9H221 673 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 TMEM181Q9P2C4 612 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 COG5Q9UP83 839 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 KIAA0100Q14667 2235 aaKnown RBP4.98□□□□□ -1.61
SKP1-202ENST00000353411 CKAP5Q14008 2032 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 FAM86C2PA6NEL3 165 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 SUV39H1O43463 412 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 SBK2P0C263 348 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 PPIBP23284 216 aaKnown RBP4.98□□□□□ -1.61
SKP1-202ENST00000353411 ELK4P28324 431 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 FMO3P31513 532 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 SLC26A2P50443 739 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 SLC12A3P55017 1021 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 CCNA1P78396 465 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 PLD1Q13393 1074 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 PWP1Q13610 501 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 SYT16Q17RD7 645 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 CFAP77Q6ZQR2 320 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 C16orf86Q6ZW13 317 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 ZDHHC17Q8IUH5 632 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 ZSCAN1Q8NBB4 408 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 ZFP90Q8TF47 636 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 CCDC107Q8WV48 283 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 UFD1Q92890 307 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 TTLL2Q9BWV7 592 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 BEX2Q9BXY8 128 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 CATSPERBQ9H7T0 1116 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 SMURF1Q9HCE7 757 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 WWOXQ9NZC7 414 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 TLL1O43897 1013 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 FAM86B2P0C5J1 330 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 HUNKP57058 714 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 ILF3Q12906 894 aaKnown RBP eCLIP4.98□□□□□ -1.61
SKP1-202ENST00000353411 SMIM5Q71RC9 77 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 TXNDC5Q8NBS9 432 aaKnown RBP4.98□□□□□ -1.61
SKP1-202ENST00000353411 KCNN1Q92952 543 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 TEFMQ96QE5 360 aaKnown RBP4.98□□□□□ -1.61
SKP1-202ENST00000353411 AGAP2Q99490 1192 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 POLR3FQ9H1D9 316 aaPredicted RBP4.98□□□□□ -1.61
SKP1-202ENST00000353411 RHOJQ9H4E5 214 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 INIPQ9NRY2 104 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 RCOR3Q9P2K3 495 aaPredicted RBP4.98□□□□□ -1.61
SKP1-202ENST00000353411 COL15A1P39059 1388 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 MYO5BQ9ULV0 1848 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 DOCK7Q96N67 2140 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 HEG1Q9ULI3 1381 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 SIGLEC16A6NMB1 481 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 CCNDBP1O95273 360 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 SNAPINO95295 136 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 RPS2P15880 293 aaKnown RBP4.97□□□□□ -1.61
SKP1-202ENST00000353411 OGNP20774 298 aaKnown RBP4.97□□□□□ -1.61
SKP1-202ENST00000353411 POU6F1Q14863 301 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 SLC9B1Q4ZJI4 515 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 LRRC66Q68CR7 880 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 OVOS1Q6IE37 1185 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 MOB2Q70IA6 237 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 STAG3L4Q8TBR4 150 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 SHC3Q92529 594 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 TNFRSF25Q93038 417 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 TMBIM1Q969X1 311 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 ITCHQ96J02 903 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 NT5C1AQ9BXI3 368 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 GMEB2Q9UKD1 530 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 STUB1Q9UNE7 303 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 DLG5Q8TDM6 1919 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 TRAPPC13A5PLN9 417 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 ERVV-1B6SEH8 477 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 F5H6K3 240 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 RGS13O14921 159 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 SLC28A2O43868 658 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 SPATA31D3P0C874 917 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 SMIM18P0DKX4 95 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 KLRC2P26717 231 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 PCSK6P29122 969 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 ETV5P41161 510 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 MAGEA12P43365 314 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 GNPDA1P46926 289 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 FAM205BPQ63HN1 556 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 NANOGP8Q6NSW7 305 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 XRRA1Q6P2D8 792 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 SPATA31D4Q6ZUB0 917 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 ZNF367Q7RTV3 350 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 RBFAQ8N0V3 343 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 OR4A15Q8NGL6 344 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 CEP76Q8TAP6 659 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 SGK3Q96BR1 496 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 FAM167AQ96KS9 214 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 SETD4Q9NVD3 440 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 C14orf119Q9NWQ9 140 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 PRELID3BQ9Y3B1 194 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 ISM1B1AKI9 464 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 SLC9A3R1O14745 358 aaPredicted RBP4.97□□□□□ -1.61
SKP1-202ENST00000353411 SLC19A2O60779 497 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms