RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 E5RI56 91 aa13.21□□□□□ -0.29
UBA3-201ENST00000349511 NPHS1O60500 1241 aa13.21□□□□□ -0.29
UBA3-201ENST00000349511 OR6B1O95007 311 aa13.21□□□□□ -0.29
UBA3-201ENST00000349511 PGM3O95394 542 aa13.21□□□□□ -0.29
UBA3-201ENST00000349511 CYP2A6P11509 494 aaPredicted RBP13.21□□□□□ -0.29
UBA3-201ENST00000349511 VIPR1P32241 457 aa13.21□□□□□ -0.29
UBA3-201ENST00000349511 PFKPQ01813 784 aa13.21□□□□□ -0.29
UBA3-201ENST00000349511 PON2Q15165 354 aa13.21□□□□□ -0.29
UBA3-201ENST00000349511 FAM83EQ2M2I3 478 aa13.21□□□□□ -0.29
UBA3-201ENST00000349511 AARS2Q5JTZ9 985 aaKnown RBP13.21□□□□□ -0.29
UBA3-201ENST00000349511 TICAM1Q8IUC6 712 aa13.21□□□□□ -0.29
UBA3-201ENST00000349511 TMEM126BQ8IUX1 230 aa13.21□□□□□ -0.29
UBA3-201ENST00000349511 EXT2Q93063 718 aa13.21□□□□□ -0.29
UBA3-201ENST00000349511 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.21□□□□□ -0.29
UBA3-201ENST00000349511 LRIG1Q96JA1 1093 aa13.21□□□□□ -0.29
UBA3-201ENST00000349511 PKP2Q99959 881 aa13.21□□□□□ -0.29
UBA3-201ENST00000349511 Q9H521 79 aa13.21□□□□□ -0.29
UBA3-201ENST00000349511 ALG9Q9H6U8 611 aa13.21□□□□□ -0.29
UBA3-201ENST00000349511 TAS2R13Q9NYV9 303 aa13.21□□□□□ -0.29
UBA3-201ENST00000349511 PCDHGB4Q9UN71 923 aa13.21□□□□□ -0.29
UBA3-201ENST00000349511 PCDHGB5Q9Y5G0 923 aa13.21□□□□□ -0.29
UBA3-201ENST00000349511 SMIM31A0A1B0GVY4 71 aa13.21□□□□□ -0.3
UBA3-201ENST00000349511 A0A1W2PQ67 120 aa13.21□□□□□ -0.3
UBA3-201ENST00000349511 H3BMM5 538 aa13.21□□□□□ -0.3
UBA3-201ENST00000349511 SDHDO14521 159 aa13.21□□□□□ -0.3
UBA3-201ENST00000349511 BCAS2O75934 225 aaPredicted RBP13.21□□□□□ -0.3
UBA3-201ENST00000349511 LTA4HP09960 611 aaKnown RBP13.21□□□□□ -0.3
UBA3-201ENST00000349511 ELFN1P0C7U0 828 aa13.21□□□□□ -0.3
UBA3-201ENST00000349511 ZNF37AP17032 561 aaPredicted RBP13.21□□□□□ -0.3
UBA3-201ENST00000349511 CD72P21854 359 aa13.21□□□□□ -0.3
UBA3-201ENST00000349511 ACRV1P26436 265 aa13.21□□□□□ -0.3
UBA3-201ENST00000349511 EIF2DP41214 584 aaKnown RBP13.21□□□□□ -0.3
UBA3-201ENST00000349511 PTGER3P43115 390 aa13.21□□□□□ -0.3
UBA3-201ENST00000349511 KCNC1P48547 511 aa13.21□□□□□ -0.3
UBA3-201ENST00000349511 RGS19P49795 217 aa13.21□□□□□ -0.3
UBA3-201ENST00000349511 RALGDSQ12967 914 aa13.21□□□□□ -0.3
UBA3-201ENST00000349511 SH2D4BQ5SQS7 431 aa13.21□□□□□ -0.3
UBA3-201ENST00000349511 DET1Q7L5Y6 550 aa13.21□□□□□ -0.3
UBA3-201ENST00000349511 ADCY4Q8NFM4 1077 aa13.21□□□□□ -0.3
UBA3-201ENST00000349511 DLG3Q92796 817 aa13.21□□□□□ -0.3
UBA3-201ENST00000349511 MAELQ96JY0 434 aaKnown RBP13.21□□□□□ -0.3
UBA3-201ENST00000349511 UBXN10Q96LJ8 280 aa13.21□□□□□ -0.3
UBA3-201ENST00000349511 UBE2ZQ9H832 354 aaPredicted RBP13.21□□□□□ -0.3
UBA3-201ENST00000349511 CYP4F12Q9HCS2 524 aa13.21□□□□□ -0.3
UBA3-201ENST00000349511 AP4B1Q9Y6B7 739 aa13.21□□□□□ -0.3
UBA3-201ENST00000349511 PRSS51A0A1B0GVH4 220 aa13.2□□□□□ -0.3
UBA3-201ENST00000349511 ACOT8O14734 319 aa13.2□□□□□ -0.3
UBA3-201ENST00000349511 PRMT5O14744 637 aaPredicted RBP13.2□□□□□ -0.3
UBA3-201ENST00000349511 PFDN6O15212 129 aa13.2□□□□□ -0.3
UBA3-201ENST00000349511 MBTPS2O43462 519 aa13.2□□□□□ -0.3
UBA3-201ENST00000349511 NARSO43776 548 aaKnown RBP13.2□□□□□ -0.3
UBA3-201ENST00000349511 EGFP01133 1207 aa13.2□□□□□ -0.3
UBA3-201ENST00000349511 CTHP32929 405 aa13.2□□□□□ -0.3
UBA3-201ENST00000349511 LSAMPQ13449 338 aa13.2□□□□□ -0.3
UBA3-201ENST00000349511 ACOX1Q15067 660 aa13.2□□□□□ -0.3
UBA3-201ENST00000349511 ZNF648Q5T619 568 aaPredicted RBP13.2□□□□□ -0.3
UBA3-201ENST00000349511 AGAP9Q5VTM2 703 aa13.2□□□□□ -0.3
UBA3-201ENST00000349511 PTRHD1Q6GMV3 140 aaKnown RBP13.2□□□□□ -0.3
UBA3-201ENST00000349511 ERAP2Q6P179 960 aa13.2□□□□□ -0.3
UBA3-201ENST00000349511 ISLR2Q6UXK2 745 aa13.2□□□□□ -0.3
UBA3-201ENST00000349511 GK5Q6ZS86 529 aa13.2□□□□□ -0.3
UBA3-201ENST00000349511 NUDT18Q6ZVK8 323 aa13.2□□□□□ -0.3
UBA3-201ENST00000349511 CBARPQ8N350 705 aaPredicted RBP13.2□□□□□ -0.3
UBA3-201ENST00000349511 SLC44A3Q8N4M1 653 aa13.2□□□□□ -0.3
UBA3-201ENST00000349511 TXNDC5Q8NBS9 432 aaKnown RBP13.2□□□□□ -0.3
UBA3-201ENST00000349511 CATSPER1Q8NEC5 780 aa13.2□□□□□ -0.3
UBA3-201ENST00000349511 LKAAEAR1Q8TD35 194 aa13.2□□□□□ -0.3
UBA3-201ENST00000349511 PTERQ96BW5 349 aa13.2□□□□□ -0.3
UBA3-201ENST00000349511 MRPL46Q9H2W6 279 aaKnown RBP13.2□□□□□ -0.3
UBA3-201ENST00000349511 PKD2L2Q9NZM6 624 aa13.2□□□□□ -0.3
UBA3-201ENST00000349511 DKK3Q9UBP4 350 aa13.2□□□□□ -0.3
UBA3-201ENST00000349511 MBD1Q9UIS9 605 aaPredicted RBP13.2□□□□□ -0.3
UBA3-201ENST00000349511 PIAS3Q9Y6X2 628 aa13.2□□□□□ -0.3
UBA3-201ENST00000349511 DOCK9Q9BZ29 2069 aa13.19□□□□□ -0.3
UBA3-201ENST00000349511 TSPAN11A1L157 253 aa13.19□□□□□ -0.3
UBA3-201ENST00000349511 TRPC5OSA6NMA1 111 aa13.19□□□□□ -0.3
UBA3-201ENST00000349511 SPINT1O43278 529 aa13.19□□□□□ -0.3
UBA3-201ENST00000349511 TRIM16O95361 564 aa13.19□□□□□ -0.3
UBA3-201ENST00000349511 WISP3O95389 354 aaPredicted RBP13.19□□□□□ -0.3
UBA3-201ENST00000349511 HNRNPLP14866 589 aaKnown RBP eCLIP13.19□□□□□ -0.3
UBA3-201ENST00000349511 ZNF7P17097 686 aaPredicted RBP13.19□□□□□ -0.3
UBA3-201ENST00000349511 TCN1P20061 433 aaPredicted RBP13.19□□□□□ -0.3
UBA3-201ENST00000349511 MMP12P39900 470 aa13.19□□□□□ -0.3
UBA3-201ENST00000349511 LIPIQ6XZB0 460 aa13.19□□□□□ -0.3
UBA3-201ENST00000349511 RPS27LQ71UM5 84 aaKnown RBP13.19□□□□□ -0.3
UBA3-201ENST00000349511 SPATA24Q86W54 205 aa13.19□□□□□ -0.3
UBA3-201ENST00000349511 PELI3Q8N2H9 469 aa13.19□□□□□ -0.3
UBA3-201ENST00000349511 NXPE1Q8N323 547 aa13.19□□□□□ -0.3
UBA3-201ENST00000349511 FAM156AQ8NDB6 213 aa13.19□□□□□ -0.3
UBA3-201ENST00000349511 TMIEQ8NEW7 156 aa13.19□□□□□ -0.3
UBA3-201ENST00000349511 CEP70Q8NHQ1 597 aa13.19□□□□□ -0.3
UBA3-201ENST00000349511 PHF21BQ96EK2 531 aa13.19□□□□□ -0.3
UBA3-201ENST00000349511 CNBD2Q96M20 576 aa13.19□□□□□ -0.3
UBA3-201ENST00000349511 MRPL57Q9BQC6 102 aaKnown RBP13.19□□□□□ -0.3
UBA3-201ENST00000349511 RIOK2Q9BVS4 552 aaKnown RBP13.19□□□□□ -0.3
UBA3-201ENST00000349511 CLPBQ9H078 707 aa13.19□□□□□ -0.3
UBA3-201ENST00000349511 SLC6A17Q9H1V8 727 aa13.19□□□□□ -0.3
UBA3-201ENST00000349511 P2RY12Q9H244 342 aa13.19□□□□□ -0.3
UBA3-201ENST00000349511 EPB41L1Q9H4G0 881 aa13.19□□□□□ -0.3
UBA3-201ENST00000349511 FAM83DQ9H4H8 585 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms