RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 NPIPB15A6NHN6 443 aaPredicted RBP15.19■□□□□ 0.02
UPF3B-202ENST00000345865 FKTNO75072 461 aa15.19■□□□□ 0.02
UPF3B-202ENST00000345865 GLUD1P00367 558 aa15.19■□□□□ 0.02
UPF3B-202ENST00000345865 PSMA4P25789 261 aaKnown RBP15.19■□□□□ 0.02
UPF3B-202ENST00000345865 STK19P49842 368 aaPredicted RBP15.19■□□□□ 0.02
UPF3B-202ENST00000345865 DGKQP52824 942 aa15.19■□□□□ 0.02
UPF3B-202ENST00000345865 PRKG2Q13237 762 aa15.19■□□□□ 0.02
UPF3B-202ENST00000345865 SELPLGQ14242 412 aa15.19■□□□□ 0.02
UPF3B-202ENST00000345865 INPP5AQ14642 412 aa15.19■□□□□ 0.02
UPF3B-202ENST00000345865 CYP51A1Q16850 503 aa15.19■□□□□ 0.02
UPF3B-202ENST00000345865 AP5B1Q2VPB7 878 aa15.19■□□□□ 0.02
UPF3B-202ENST00000345865 MBOAT1Q6ZNC8 495 aa15.19■□□□□ 0.02
UPF3B-202ENST00000345865 RBM44Q6ZP01 1051 aaKnown RBP15.19■□□□□ 0.02
UPF3B-202ENST00000345865 FAM43BQ6ZT52 329 aaPredicted RBP15.19■□□□□ 0.02
UPF3B-202ENST00000345865 GPR26Q8NDV2 337 aa15.19■□□□□ 0.02
UPF3B-202ENST00000345865 NMD3Q96D46 503 aaKnown RBP15.19■□□□□ 0.02
UPF3B-202ENST00000345865 TRIM15Q9C019 465 aa15.19■□□□□ 0.02
UPF3B-202ENST00000345865 RPF2Q9H7B2 306 aaKnown RBP15.19■□□□□ 0.02
UPF3B-202ENST00000345865 FARSBQ9NSD9 589 aaKnown RBP15.19■□□□□ 0.02
UPF3B-202ENST00000345865 GNPTGQ9UJJ9 305 aa15.19■□□□□ 0.02
UPF3B-202ENST00000345865 NEUROG3Q9Y4Z2 214 aa15.19■□□□□ 0.02
UPF3B-202ENST00000345865 OARD1Q9Y530 152 aa15.19■□□□□ 0.02
UPF3B-202ENST00000345865 TRIM17Q9Y577 477 aa15.19■□□□□ 0.02
UPF3B-202ENST00000345865 KIAA1671Q9BY89 1806 aa15.19■□□□□ 0.02
UPF3B-202ENST00000345865 ACOX3O15254 700 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 RAD51BO15315 384 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 GNAO1P09471 354 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 ITGALP20701 1170 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 HRH2P25021 359 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 RPL10P27635 214 aaKnown RBP15.18■□□□□ 0.02
UPF3B-202ENST00000345865 CCT8P50990 548 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 OR4D2P58180 307 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 EMX2Q04743 252 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 NR6A1Q15406 480 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 CYP20A1Q6UW02 462 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 RFLNAQ6ZTI6 216 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 MILR1Q7Z6M3 343 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 RALGPS2Q86X27 583 aaPredicted RBP15.18■□□□□ 0.02
UPF3B-202ENST00000345865 TRPV3Q8NET8 790 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 TFAP2CQ92754 450 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 ACDQ96AP0 544 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 ABCG8Q9H221 673 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 PFDN4Q9NQP4 134 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 SUN2Q9UH99 717 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 POLR3HQ9Y535 204 aaPredicted RBP15.18■□□□□ 0.02
UPF3B-202ENST00000345865 PLXNB3Q9ULL4 1909 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.18■□□□□ 0.02
UPF3B-202ENST00000345865 CKMP06732 381 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 IL10P22301 178 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 PLEKHG6Q3KR16 790 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 SPATS1Q496A3 300 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 CNKSR3Q6P9H4 555 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 DDX53Q86TM3 631 aaKnown RBP15.18■□□□□ 0.02
UPF3B-202ENST00000345865 PAF1Q8N7H5 531 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 GOLM1Q8NBJ4 401 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 ZFP28Q8NHY6 868 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 RHBDF1Q96CC6 855 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 DGCR14Q96DF8 476 aaKnown RBP15.18■□□□□ 0.02
UPF3B-202ENST00000345865 PPM1MQ96MI6 270 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 LRRC3Q9BY71 257 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 FAM126AQ9BYI3 521 aaPredicted RBP15.18■□□□□ 0.02
UPF3B-202ENST00000345865 ANKRD60Q9BZ19 345 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 SMG9Q9H0W8 520 aaKnown RBP15.18■□□□□ 0.02
UPF3B-202ENST00000345865 ABCB8Q9NUT2 735 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 MBD1Q9UIS9 605 aaPredicted RBP15.18■□□□□ 0.02
UPF3B-202ENST00000345865 CRLS1Q9UJA2 301 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 OGDHLQ9ULD0 1010 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 OAZ3Q9UMX2 235 aa15.18■□□□□ 0.02
UPF3B-202ENST00000345865 FFAR3O14843 346 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 GPR42O15529 346 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 SOCS5O75159 536 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 OTCP00480 354 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 MT-ND1P03886 318 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 CHRM1P11229 460 aaPredicted RBP15.17■□□□□ 0.02
UPF3B-202ENST00000345865 FASP25445 335 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 CSNK1DP48730 415 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 MNX1P50219 401 aaPredicted RBP15.17■□□□□ 0.02
UPF3B-202ENST00000345865 CLCN2P51788 898 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 EEFSECP57772 596 aaKnown RBP15.17■□□□□ 0.02
UPF3B-202ENST00000345865 PLIN5Q00G26 463 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 KIAA0040Q15053 153 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 PYCR3Q53H96 274 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 INTS11Q5TA45 600 aaKnown RBP15.17■□□□□ 0.02
UPF3B-202ENST00000345865 CRTC1Q6UUV9 634 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 HTR3DQ70Z44 454 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 TMC8Q8IU68 726 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 HID1Q8IV36 788 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 FIBCD1Q8N539 461 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 DPP10Q8N608 796 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 ZBTB2Q8N680 514 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 SMOXQ9NWM0 555 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 COMMD3-BMI1R4GMX3 469 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 CROCCQ5TZA2 2017 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 PRRC2BQ5JSZ5 2229 aaKnown RBP15.17■□□□□ 0.02
UPF3B-202ENST00000345865 LILRB3O75022 631 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 S100BP04271 92 aaPredicted RBP15.17■□□□□ 0.02
UPF3B-202ENST00000345865 ENO2P09104 434 aaPredicted RBP15.17■□□□□ 0.02
UPF3B-202ENST00000345865 DGKAP23743 735 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 RGS4P49798 205 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 MTPNP58546 118 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms