RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 E2F2Q14209 437 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 CARTPTQ16568 116 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 ADCK2Q7Z695 626 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 CARNMT1Q8N4J0 409 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 FCRL2Q96LA5 508 aaPredicted RBP4.72□□□□□ -1.65
CSMD3-203ENST00000343508 C8orf48Q96LL4 319 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 STRA6Q9BX79 667 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 SLA2Q9H6Q3 261 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 ZNF224Q9NZL3 707 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 ZNF282Q9UDV7 671 aaPredicted RBP4.72□□□□□ -1.65
CSMD3-203ENST00000343508 SPEF1Q9Y4P9 236 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 SCN4AP35499 1836 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 A0A1W2PQ72 361 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 E9PAM4 449 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 PRRG1O14668 218 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 SPTLC1O15269 473 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 ALDH2P05091 517 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 BMP7P18075 431 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 CYP2B6P20813 491 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 PSMA3P25788 255 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 DCKP27707 260 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 IQCCQ4KMZ1 466 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 PAN2Q504Q3 1202 aaKnown RBP4.72□□□□□ -1.65
CSMD3-203ENST00000343508 NBPF12Q5TAG4 269 aaPredicted RBP4.72□□□□□ -1.65
CSMD3-203ENST00000343508 ZDHHC20Q5W0Z9 365 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 ERAP2Q6P179 960 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 CHSY3Q70JA7 882 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 OTOP3Q7RTS5 596 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 KLHL6Q8WZ60 621 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 FZD8Q9H461 694 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 SCAF8Q9UPN6 1271 aaKnown RBP4.72□□□□□ -1.65
CSMD3-203ENST00000343508 PCDHGB3Q9Y5G1 929 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 TMEM233B4DJY2 109 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 TFPTP0C1Z6 253 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 HNMTP50135 292 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 GTF2A2P52657 109 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 GNG2P59768 71 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 PTSQ03393 145 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 LGALS3BPQ08380 585 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 TBC1D25Q3MII6 688 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 SLC36A3Q495N2 470 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 CCDC157Q569K6 752 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 ZNF280DQ6N043 979 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 C15orf39Q6ZRI6 1047 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 PCED1BQ96HM7 432 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 B3GALT6Q96L58 329 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 MYRFLQ96LU7 910 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 CORO1BQ9BR76 489 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 TOR4AQ9NXH8 423 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 ZNF541Q9H0D2 1346 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 CNTNAP1P78357 1384 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 PGRMC2O15173 223 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 DLX3O60479 287 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 IGSF6O95976 241 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 MT-ND1P03886 318 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 PTGER3P43115 390 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 STARP49675 285 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 GSK3BP49841 420 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 SRP54P61011 504 aaKnown RBP4.72□□□□□ -1.65
CSMD3-203ENST00000343508 CD83Q01151 205 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 TAF1AQ15573 450 aaPredicted RBP4.72□□□□□ -1.65
CSMD3-203ENST00000343508 CTXN3Q4LDR2 81 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 USP39Q53GS9 565 aaKnown RBP4.72□□□□□ -1.65
CSMD3-203ENST00000343508 GNASQ5JWF2 1037 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 CERS6Q6ZMG9 384 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 NUDT18Q6ZVK8 323 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 CILP2Q8IUL8 1156 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 TBATAQ96M53 351 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 CGREF1Q99674 301 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 KIFC1Q9BW19 673 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 MED28Q9H204 178 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 SMOXQ9NWM0 555 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 TAS2R9Q9NYW1 312 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 FNIP2Q9P278 1114 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 SLC17A6Q9P2U8 582 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 SERPINB7O75635 380 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 UPK1BO75841 260 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 CPOXP36551 454 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 ABRQ12979 859 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 UBAP2Q5T6F2 1119 aaKnown RBP4.72□□□□□ -1.65
CSMD3-203ENST00000343508 SCIMPQ6UWF3 145 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 DCDC5Q6ZRR9 648 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 ASCC1Q8N9N2 400 aaKnown RBP4.72□□□□□ -1.65
CSMD3-203ENST00000343508 C2CD4AQ8NCU7 369 aaPredicted RBP4.72□□□□□ -1.65
CSMD3-203ENST00000343508 TFAP2CQ92754 450 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 ZNF641Q96N77 438 aaPredicted RBP4.72□□□□□ -1.65
CSMD3-203ENST00000343508 IPPKQ9H8X2 491 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 MARCH2Q9P0N8 246 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 POFUT2Q9Y2G5 429 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 MRPS14O60783 128 aaKnown RBP4.72□□□□□ -1.65
CSMD3-203ENST00000343508 OXSR1O95747 527 aaPredicted RBP4.72□□□□□ -1.65
CSMD3-203ENST00000343508 CLTBP09497 229 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 HTR1EP28566 365 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 IRF8Q02556 426 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 SMARCB1Q12824 385 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 MEP1AQ16819 746 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 TAPT1Q6NXT6 567 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 SYVN1Q86TM6 617 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 BIRC7Q96CA5 298 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 GPR20Q99678 358 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms