RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 RGS10O43665 173 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 OPN1SWP03999 348 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 GHRHRQ02643 423 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 KCNAB2Q13303 367 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 C6orf136Q5SQH8 315 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 VARS2Q5ST30 1063 aaKnown RBP12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 INTS11Q5TA45 600 aaKnown RBP12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 UBE2R2Q712K3 238 aaPredicted RBP12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 PIWIL3Q7Z3Z3 882 aaKnown RBP12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 SERPINA9Q86WD7 417 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 CNIH3Q8TBE1 160 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 PROX1Q92786 737 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 TDRD1Q9BXT4 1180 aaKnown RBP12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 TMLHEQ9NVH6 421 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 TOR4AQ9NXH8 423 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 NUP214P35658 2090 aaPredicted RBP12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 LAMB1P07942 1786 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 ARID1BQ8NFD5 2236 aaPredicted RBP12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 GPR39O43194 453 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 S1PR4O95977 384 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 GLUD1P00367 558 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 KCNE1P15382 129 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 KIR3DL1P43629 444 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 CDKN1CP49918 316 aaPredicted RBP12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 SPIBQ01892 262 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 MXD1Q05195 221 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 TAB1Q15750 504 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 C18orf21Q32NC0 220 aaPredicted RBP12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 ANKDD1AQ495B1 522 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 PAGE3Q5JUK9 113 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 PPP4R4Q6NUP7 873 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 RNF111Q6ZNA4 994 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 LSMEM2Q8N112 164 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 SMG8Q8ND04 991 aaKnown RBP12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 CD320Q9NPF0 282 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 GTF2IRD1Q9UHL9 959 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 GNPTGQ9UJJ9 305 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 PSME2Q9UL46 239 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 SNX6Q9UNH7 406 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 SCN7AQ01118 1682 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 TNRC6CQ9HCJ0 1690 aaKnown RBP12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 FAM234BA2RU67 622 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 LZTS3O60299 673 aaPredicted RBP12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 OR56A5P0C7T3 313 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 EPORP19235 508 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 COL9A2Q14055 689 aaPredicted RBP12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 NPTX1Q15818 432 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 PARP15Q460N3 678 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 NOL9Q5SY16 702 aaKnown RBP12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 PDE12Q6L8Q7 609 aaKnown RBP12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 TTC29Q8NA56 475 aaPredicted RBP12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 MRPS31Q92665 395 aaKnown RBP12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 SLC2A13Q96QE2 648 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 AARSD1Q9BTE6 412 aaKnown RBP12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 TFB2MQ9H5Q4 396 aaKnown RBP12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 RPF2Q9H7B2 306 aaKnown RBP12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 INTS10Q9NVR2 710 aaKnown RBP12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 CMTM6Q9NX76 183 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 OR2AG2A6NM03 316 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 FFAR2O15552 330 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 ALDH1A1P00352 501 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 CYP2A7P20853 494 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 SLC6A2P23975 617 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 IL12AP29459 219 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 GKP32189 559 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 CTSKP43235 329 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 TOP3AQ13472 1001 aaPredicted RBP12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 ARHGEF6Q15052 776 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 ZNF829Q3KNS6 432 aaPredicted RBP12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 MS4A13Q5J8X5 152 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 COLEC12Q5KU26 742 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 TMEM236Q5W0B7 351 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 ELMOD1Q8N336 334 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 LEMD2Q8NC56 503 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 OR10T2Q8NGX3 314 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 FNDC8Q8TC99 324 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 COPS8Q99627 209 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 GABRDO14764 452 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 KERAO60938 352 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 MAGEA3P43357 314 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 CCL23P55773 120 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 FAM189BP81408 668 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 IL10RBQ08334 325 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 PRSS55Q6UWB4 352 aaPredicted RBP12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 ZMIZ2Q8NF64 920 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 IGSF8Q969P0 613 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 GTPBP3Q969Y2 492 aaKnown RBP12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 ADAMTS10Q9H324 1103 aa12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 FAM124BQ9H5Z6 455 aaPredicted RBP12.24□□□□□ -0.45
SNRNP48-201ENST00000342415 ZNF487B1APH4 448 aa12.23□□□□□ -0.45
SNRNP48-201ENST00000342415 FBP2O00757 339 aa12.23□□□□□ -0.45
SNRNP48-201ENST00000342415 ASGR1P07306 291 aa12.23□□□□□ -0.45
SNRNP48-201ENST00000342415 HTR6P50406 440 aa12.23□□□□□ -0.45
SNRNP48-201ENST00000342415 INHBCP55103 352 aa12.23□□□□□ -0.45
SNRNP48-201ENST00000342415 YBEYP58557 167 aaPredicted RBP12.23□□□□□ -0.45
SNRNP48-201ENST00000342415 HIST2H2ACQ16777 129 aaPredicted RBP12.23□□□□□ -0.45
SNRNP48-201ENST00000342415 HIST2H2AA3Q6FI13 130 aa12.23□□□□□ -0.45
SNRNP48-201ENST00000342415 SULT1C3Q6IMI6 304 aa12.23□□□□□ -0.45
SNRNP48-201ENST00000342415 SYVN1Q86TM6 617 aa12.23□□□□□ -0.45
SNRNP48-201ENST00000342415 LRRTM3Q86VH5 581 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms