RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 SVOPLQ8N434 492 aa12.37□□□□□ -0.43
SSX2IP-201ENST00000342203 ASCC1Q8N9N2 400 aaKnown RBP12.37□□□□□ -0.43
SSX2IP-201ENST00000342203 LRRC20Q8TCA0 184 aa12.37□□□□□ -0.43
SSX2IP-201ENST00000342203 KCNC2Q96PR1 638 aa12.37□□□□□ -0.43
SSX2IP-201ENST00000342203 TRNT1Q96Q11 434 aaKnown RBP12.37□□□□□ -0.43
SSX2IP-201ENST00000342203 PAK1IP1Q9NWT1 392 aaPredicted RBP12.37□□□□□ -0.43
SSX2IP-201ENST00000342203 MARCH2Q9P0N8 246 aa12.37□□□□□ -0.43
SSX2IP-201ENST00000342203 CNOT11Q9UKZ1 510 aaKnown RBP12.37□□□□□ -0.43
SSX2IP-201ENST00000342203 AKAP11Q9UKA4 1901 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 FAM234BA2RU67 622 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 AREL1O15033 823 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 BRCC3P46736 316 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 PDE12Q6L8Q7 609 aaKnown RBP12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 TXNDC11Q6PKC3 985 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 ADAMTSL2Q86TH1 951 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 TBC1D15Q8TC07 691 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 ITPKCQ96DU7 683 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 PHOX2BQ99453 314 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 OR10H3O60404 316 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 MT-ND2P03891 347 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 HLA-DQB2P05538 268 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 CAPN3P20807 821 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 AGXTP21549 392 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 GPR15P49685 360 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 PLEKHG6Q3KR16 790 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 ZNF517Q6ZMY9 492 aaPredicted RBP12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 PLPPR4Q7Z2D5 763 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 CIR1Q86X95 450 aaPredicted RBP12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 MYOCQ99972 504 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 ZYG11BQ9C0D3 744 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 CPQQ9Y646 472 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 ARL5AQ9Y689 179 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 STYXL1Q9Y6J8 313 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 COQ9O75208 318 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 C1RP00736 705 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 FABP3P05413 133 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 G6PDP11413 515 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 TMEM135Q86UB9 458 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 CACTIN-AS1Q8N1I8 211 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 GPRC5AQ8NFJ5 357 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 OR6K2Q8NGY2 324 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 ADM5C9JUS6 153 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 MATN3O15232 486 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 KPNA6O60684 536 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 RFPL2O75678 378 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 ANXA5P08758 320 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 MATN1P21941 496 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 TTPAP49638 278 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 NOL9Q5SY16 702 aaKnown RBP12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 HOMEZQ8IX15 550 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 TMEM102Q8N9M5 508 aaPredicted RBP12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 SIDT2Q8NBJ9 832 aaKnown RBP12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 TMEM203Q969S6 136 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 TMEM209Q96SK2 561 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 COQ3Q9NZJ6 369 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 FBXW11Q9UKB1 542 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 PCDHB9Q9Y5E1 797 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 SLIT2O94813 1529 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 TNFRSF11BO00300 401 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 CASKO14936 926 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 C9P02748 559 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 TYMPP19971 482 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 CCNCP24863 283 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 KIR3DL1P43629 444 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 CDH12P55289 794 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 CD47Q08722 323 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 RNF111Q6ZNA4 994 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 PLEKHG7Q6ZR37 379 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 GRPEL2Q8TAA5 225 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 ATL1Q8WXF7 558 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 ARNTL2Q8WYA1 636 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 PSMG2Q969U7 264 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 HNRNPABQ99729 332 aaKnown RBP12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 MRPL39Q9NYK5 338 aaKnown RBP12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 SPATA31A6Q5VVP1 1343 aa12.36□□□□□ -0.43
SSX2IP-201ENST00000342203 H0YJX3 145 aa12.35□□□□□ -0.43
SSX2IP-201ENST00000342203 NIPSNAP2O75323 286 aa12.35□□□□□ -0.43
SSX2IP-201ENST00000342203 RPP40O75818 363 aaKnown RBP12.35□□□□□ -0.43
SSX2IP-201ENST00000342203 ZNF24P17028 368 aa12.35□□□□□ -0.43
SSX2IP-201ENST00000342203 ITGA1P56199 1179 aa12.35□□□□□ -0.43
SSX2IP-201ENST00000342203 DAOAP59103 153 aa12.35□□□□□ -0.43
SSX2IP-201ENST00000342203 EN1Q05925 392 aaPredicted RBP12.35□□□□□ -0.43
SSX2IP-201ENST00000342203 TBRG1Q3YBR2 411 aa12.35□□□□□ -0.43
SSX2IP-201ENST00000342203 HDAC2Q92769 488 aaKnown RBP12.35□□□□□ -0.43
SSX2IP-201ENST00000342203 TP63Q9H3D4 680 aaPredicted RBP12.35□□□□□ -0.43
SSX2IP-201ENST00000342203 CDK14O94921 469 aa12.35□□□□□ -0.43
SSX2IP-201ENST00000342203 IL18Q14116 193 aa12.35□□□□□ -0.43
SSX2IP-201ENST00000342203 FKBP1CQ5VVH2 108 aa12.35□□□□□ -0.43
SSX2IP-201ENST00000342203 AFTPHQ6ULP2 937 aa12.35□□□□□ -0.43
SSX2IP-201ENST00000342203 FAM151BQ6UXP7 276 aa12.35□□□□□ -0.43
SSX2IP-201ENST00000342203 ACDQ96AP0 544 aa12.35□□□□□ -0.43
SSX2IP-201ENST00000342203 AP3M1Q9Y2T2 418 aa12.35□□□□□ -0.43
SSX2IP-201ENST00000342203 HSPB11Q9Y547 144 aa12.35□□□□□ -0.43
SSX2IP-201ENST00000342203 DCCP43146 1447 aa12.35□□□□□ -0.43
SSX2IP-201ENST00000342203 TSPAN1O60635 241 aa12.35□□□□□ -0.43
SSX2IP-201ENST00000342203 CHRNA1P02708 482 aa12.35□□□□□ -0.43
SSX2IP-201ENST00000342203 LPOP22079 712 aaPredicted RBP12.35□□□□□ -0.43
SSX2IP-201ENST00000342203 GSTM5P46439 218 aa12.35□□□□□ -0.43
SSX2IP-201ENST00000342203 FKBP1AP62942 108 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms