RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 E5RI56 91 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 HYAL3O43820 417 aaPredicted RBP12.94□□□□□ -0.34
TUBD1-202ENST00000340993 ACSL3O95573 720 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 FTH1P02794 183 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 RPLP0P05388 317 aaKnown RBP12.94□□□□□ -0.34
TUBD1-202ENST00000340993 SLC35G4P0C7Q5 338 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 OGNP20774 298 aaKnown RBP12.94□□□□□ -0.34
TUBD1-202ENST00000340993 ECHS1P30084 290 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 CCR7P32248 378 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 TYSND1Q2T9J0 566 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 RBM20Q5T481 1227 aaKnown RBP12.94□□□□□ -0.34
TUBD1-202ENST00000340993 STEAP4Q687X5 459 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 IYDQ6PHW0 289 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 C3orf62Q6ZUJ4 267 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 CTAGE3PQ8IX95 158 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 GPATCH11Q8N954 259 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 FAM181AQ8N9Y4 354 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 PHC3Q8NDX5 983 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 HM13Q8TCT9 377 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 SEC14L1Q92503 715 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 LRRC39Q96DD0 335 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 BIRC8Q96P09 236 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 NAT9Q9BTE0 207 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 TBC1D10AQ9BXI6 508 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 P2RY12Q9H244 342 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 CCDC68Q9H2F9 335 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 RDH14Q9HBH5 336 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 SMYD2Q9NRG4 433 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 ZFATQ9P243 1243 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 ZNF624Q9P2J8 865 aaPredicted RBP12.94□□□□□ -0.34
TUBD1-202ENST00000340993 CPNE7Q9UBL6 633 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 EME2A4GXA9 379 aaPredicted RBP12.93□□□□□ -0.34
TUBD1-202ENST00000340993 KRT87PA6NCN2 255 aa12.93□□□□□ -0.34
TUBD1-202ENST00000340993 A6NCN8 305 aa12.93□□□□□ -0.34
TUBD1-202ENST00000340993 AP2A2O94973 939 aa12.93□□□□□ -0.34
TUBD1-202ENST00000340993 VIPP01282 170 aa12.93□□□□□ -0.34
TUBD1-202ENST00000340993 FAM153BP0C7A2 387 aa12.93□□□□□ -0.34
TUBD1-202ENST00000340993 TYRP1P17643 537 aa12.93□□□□□ -0.34
TUBD1-202ENST00000340993 SLC19A1P41440 591 aa12.93□□□□□ -0.34
TUBD1-202ENST00000340993 HALP42357 657 aa12.93□□□□□ -0.34
TUBD1-202ENST00000340993 DUSP3P51452 185 aaPredicted RBP12.93□□□□□ -0.34
TUBD1-202ENST00000340993 CCL7P80098 99 aa12.93□□□□□ -0.34
TUBD1-202ENST00000340993 PRKG2Q13237 762 aa12.93□□□□□ -0.34
TUBD1-202ENST00000340993 KRT33BQ14525 404 aa12.93□□□□□ -0.34
TUBD1-202ENST00000340993 KYNUQ16719 465 aa12.93□□□□□ -0.34
TUBD1-202ENST00000340993 FAM153CQ494X1 144 aa12.93□□□□□ -0.34
TUBD1-202ENST00000340993 TEDDM1Q5T9Z0 273 aa12.93□□□□□ -0.34
TUBD1-202ENST00000340993 METRNLQ641Q3 311 aa12.93□□□□□ -0.34
TUBD1-202ENST00000340993 ZNF549Q6P9A3 640 aa12.93□□□□□ -0.34
TUBD1-202ENST00000340993 USP53Q70EK8 1073 aa12.93□□□□□ -0.34
TUBD1-202ENST00000340993 PIM3Q86V86 326 aa12.93□□□□□ -0.34
TUBD1-202ENST00000340993 IFT20Q8IY31 132 aa12.93□□□□□ -0.34
TUBD1-202ENST00000340993 SFRP1Q8N474 314 aa12.93□□□□□ -0.34
TUBD1-202ENST00000340993 SIDT2Q8NBJ9 832 aaKnown RBP12.93□□□□□ -0.34
TUBD1-202ENST00000340993 CALML6Q8TD86 181 aa12.93□□□□□ -0.34
TUBD1-202ENST00000340993 INSM2Q96T92 566 aaPredicted RBP12.93□□□□□ -0.34
TUBD1-202ENST00000340993 SLC38A3Q99624 504 aa12.93□□□□□ -0.34
TUBD1-202ENST00000340993 SLC30A3Q99726 388 aa12.93□□□□□ -0.34
TUBD1-202ENST00000340993 FOXP3Q9BZS1 431 aa12.93□□□□□ -0.34
TUBD1-202ENST00000340993 LRRC4CQ9HCJ2 640 aa12.93□□□□□ -0.34
TUBD1-202ENST00000340993 APOBEC2Q9Y235 224 aaKnown RBP12.93□□□□□ -0.34
TUBD1-202ENST00000340993 CACNA1AO00555 2505 aa12.93□□□□□ -0.34
TUBD1-202ENST00000340993 TCRBV9S1A1TA0A576 114 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 PFDN6O15212 129 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 FAM155BO75949 473 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 SLU7O95391 586 aaKnown RBP12.92□□□□□ -0.34
TUBD1-202ENST00000340993 MYBL2P10244 700 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 ACP1P24666 158 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 GABRB3P28472 473 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 MGAT5Q09328 741 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 ABRQ12979 859 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 UAP1Q16222 522 aaPredicted RBP12.92□□□□□ -0.34
TUBD1-202ENST00000340993 RPE65Q16518 533 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 RNF187Q5TA31 235 aaPredicted RBP12.92□□□□□ -0.34
TUBD1-202ENST00000340993 OGFOD3Q6PK18 319 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 OTOAQ7RTW8 1153 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 STRA8Q7Z7C7 330 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 SLC9B2Q86UD5 537 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 CCNJLQ8IV13 435 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 LMNTD1Q8N9Z9 388 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 C2CD4AQ8NCU7 369 aaPredicted RBP12.92□□□□□ -0.34
TUBD1-202ENST00000340993 FBF1Q8TES7 1133 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 SGSM3Q96HU1 749 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 HGH1Q9BTY7 390 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 KLHL3Q9UH77 587 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 PLAGL1Q9UM63 463 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 TDRKHQ9Y2W6 561 aaKnown RBP12.92□□□□□ -0.34
TUBD1-202ENST00000340993 FREM2Q5SZK8 3169 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 BHMG1C9JSJ3 638 aaPredicted RBP12.92□□□□□ -0.34
TUBD1-202ENST00000340993 EIF3HO15372 352 aaKnown RBP eCLIP12.92□□□□□ -0.34
TUBD1-202ENST00000340993 AHSGP02765 367 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 PKMP14618 531 aaKnown RBP12.92□□□□□ -0.34
TUBD1-202ENST00000340993 GLB1P16278 677 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 PLCL1Q15111 1095 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 SNAP47Q5SQN1 464 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 HES3Q5TGS1 186 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 PPM1NQ8N819 430 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 ACVR1CQ8NER5 493 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 TMEM159Q96B96 161 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 LINC00615Q96LM1 132 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms