RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 KLHDC8BQ8IXV7 354 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 NKAPQ8N5F7 415 aaKnown RBP14.19□□□□□ -0.14
CPSF7-201ENST00000340437 LZICQ8WZA0 190 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 PKMYT1Q99640 499 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 DAPK2Q9UIK4 370 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 LOC285556D6RIA3 1793 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 PRAMEF11O60813 436 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 TRIM32Q13049 653 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 CPSF6Q16630 551 aaKnown RBP eCLIP14.19□□□□□ -0.14
CPSF7-201ENST00000340437 PGS1Q32NB8 556 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 ZNF829Q3KNS6 432 aaPredicted RBP14.19□□□□□ -0.14
CPSF7-201ENST00000340437 SPANXN4Q5MJ08 99 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 SULT1C3Q6IMI6 304 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 AFTPHQ6ULP2 937 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 GLMNQ92990 594 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 SLC47A1Q96FL8 570 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 TDRD1Q9BXT4 1180 aaKnown RBP14.19□□□□□ -0.14
CPSF7-201ENST00000340437 RIBC2Q9H4K1 309 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 NTN4Q9HB63 628 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 ZNF510Q9Y2H8 683 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 NYNRINQ9P2P1 1898 aaKnown RBP14.19□□□□□ -0.14
CPSF7-201ENST00000340437 MITFO75030 526 aaPredicted RBP14.18□□□□□ -0.14
CPSF7-201ENST00000340437 INMTO95050 263 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 FUCA1P04066 466 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 LPOP22079 712 aaPredicted RBP14.18□□□□□ -0.14
CPSF7-201ENST00000340437 FMO3P31513 532 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 HLCSP50747 726 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 ATN1P54259 1190 aaPredicted RBP14.18□□□□□ -0.14
CPSF7-201ENST00000340437 EEFSECP57772 596 aaKnown RBP14.18□□□□□ -0.14
CPSF7-201ENST00000340437 KCNAB2Q13303 367 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 ATXN7L2Q5T6C5 722 aaPredicted RBP14.18□□□□□ -0.14
CPSF7-201ENST00000340437 Q6ZNX1 250 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 TANKQ92844 425 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 DPY30Q9C005 99 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 RAD21L1Q9H4I0 556 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 IKZF5Q9H5V7 419 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 ACTR8Q9H981 624 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 PRDM8Q9NQV8 689 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 TLR8Q9NR97 1041 aaKnown RBP14.18□□□□□ -0.14
CPSF7-201ENST00000340437 AGO1Q9UL18 857 aaKnown RBP14.18□□□□□ -0.14
CPSF7-201ENST00000340437 SCML2Q9UQR0 700 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 MKI67P46013 3256 aaKnown RBP14.18□□□□□ -0.14
CPSF7-201ENST00000340437 M0QZQ0 153 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 RPS17P08708 135 aaKnown RBP14.18□□□□□ -0.14
CPSF7-201ENST00000340437 AKR1A1P14550 325 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 RPL17P18621 184 aaKnown RBP14.18□□□□□ -0.14
CPSF7-201ENST00000340437 MAGEA10P43363 369 aaPredicted RBP14.18□□□□□ -0.14
CPSF7-201ENST00000340437 MLLT10P55197 1068 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 EMX2Q04743 252 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 ARHGEF7Q14155 803 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 DET1Q7L5Y6 550 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 WWOXQ9NZC7 414 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 SEPT3Q9UH03 358 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 WISP3O95389 354 aaPredicted RBP14.18□□□□□ -0.14
CPSF7-201ENST00000340437 CDH1P12830 882 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 SLC6A4P31645 630 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 GKP32189 559 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 GATMP50440 423 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 ALDH3A2P51648 485 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 PLA2G16P53816 162 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 SPCS2Q15005 226 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 NKG7Q16617 165 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 PARP15Q460N3 678 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 ARTNQ5T4W7 220 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 ZNF773Q6PK81 442 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 GOLGA7Q7Z5G4 137 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 PROSER1Q86XN7 944 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 STON2Q8WXE9 905 aa14.18□□□□□ -0.14
CPSF7-201ENST00000340437 INSIG1O15503 277 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 CYP11A1P05108 521 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 RHOCP08134 193 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 OGNP20774 298 aaKnown RBP14.17□□□□□ -0.14
CPSF7-201ENST00000340437 MAGP20916 626 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 DCKP27707 260 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 RXRGP48443 463 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 GTF2H2Q13888 395 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 SPRYD7Q5W111 196 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 GTF2H2CQ6P1K8 395 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 LIX1Q8N485 282 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 SLC22A17Q8WUG5 538 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 CSF3RQ99062 836 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 BOCQ9BWV1 1114 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 CIPCQ9C0C6 399 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 CRISPLD1Q9H336 500 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 SLC52A3Q9NQ40 469 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.17□□□□□ -0.14
CPSF7-201ENST00000340437 TMEM247A6NEH6 219 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 E2F3O00716 465 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 PRAMEF12O95522 483 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 ENO2P09104 434 aaPredicted RBP14.17□□□□□ -0.14
CPSF7-201ENST00000340437 ATXN8OSP0DMR3 200 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 RAP2AP10114 183 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 HTR7P34969 479 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 MAP2K4P45985 399 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 KPNA1P52294 538 aaPredicted RBP14.17□□□□□ -0.14
CPSF7-201ENST00000340437 ADARB1P78563 741 aaKnown RBP14.17□□□□□ -0.14
CPSF7-201ENST00000340437 OCA2Q04671 838 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 TRIP4Q15650 581 aaPredicted RBP14.17□□□□□ -0.14
CPSF7-201ENST00000340437 CRY1Q16526 586 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 CTSL3PQ5NE16 218 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms