RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 CARD16Q5EG05 197 aa14.48□□□□□ -0.09
RET-201ENST00000340058 PXYLP1Q8TE99 480 aa14.48□□□□□ -0.09
RET-201ENST00000340058 NELL1Q92832 810 aa14.48□□□□□ -0.09
RET-201ENST00000340058 TSGA13Q96PP4 275 aa14.48□□□□□ -0.09
RET-201ENST00000340058 HOPXQ9BPY8 73 aaPredicted RBP14.48□□□□□ -0.09
RET-201ENST00000340058 NUDT4Q9NZJ9 180 aa14.48□□□□□ -0.09
RET-201ENST00000340058 GTF2A1LQ9UNN4 478 aa14.48□□□□□ -0.09
RET-201ENST00000340058 DDX60LQ5H9U9 1706 aaKnown RBP14.48□□□□□ -0.09
RET-201ENST00000340058 CNOT3O75175 753 aaKnown RBP14.48□□□□□ -0.09
RET-201ENST00000340058 BCL10O95999 233 aa14.48□□□□□ -0.09
RET-201ENST00000340058 SOD2P04179 222 aa14.48□□□□□ -0.09
RET-201ENST00000340058 CNKSR3Q6P9H4 555 aa14.48□□□□□ -0.09
RET-201ENST00000340058 SLC2A7Q6PXP3 512 aa14.48□□□□□ -0.09
RET-201ENST00000340058 SNX20Q7Z614 316 aa14.48□□□□□ -0.09
RET-201ENST00000340058 UMODL1-AS1Q8N2C9 162 aa14.48□□□□□ -0.09
RET-201ENST00000340058 MAPK15Q8TD08 544 aa14.48□□□□□ -0.09
RET-201ENST00000340058 C2orf15Q8WU43 125 aaKnown RBP14.48□□□□□ -0.09
RET-201ENST00000340058 ITCHQ96J02 903 aa14.48□□□□□ -0.09
RET-201ENST00000340058 GMPPBQ9Y5P6 360 aa14.48□□□□□ -0.09
RET-201ENST00000340058 ZCWPW2A0A1B0GU75 182 aa14.47□□□□□ -0.09
RET-201ENST00000340058 SGTAO43765 313 aa14.47□□□□□ -0.09
RET-201ENST00000340058 APOA1P02647 267 aa14.47□□□□□ -0.09
RET-201ENST00000340058 DNTTP04053 509 aa14.47□□□□□ -0.09
RET-201ENST00000340058 VEGFBP49765 207 aa14.47□□□□□ -0.09
RET-201ENST00000340058 SLC20A2Q08357 652 aa14.47□□□□□ -0.09
RET-201ENST00000340058 PLEKHG6Q3KR16 790 aa14.47□□□□□ -0.09
RET-201ENST00000340058 SWT1Q5T5J6 900 aaKnown RBP14.47□□□□□ -0.09
RET-201ENST00000340058 DPY19L3Q6ZPD9 716 aa14.47□□□□□ -0.09
RET-201ENST00000340058 GATAD2AQ86YP4 633 aa14.47□□□□□ -0.09
RET-201ENST00000340058 CENPIQ92674 756 aaPredicted RBP14.47□□□□□ -0.09
RET-201ENST00000340058 FEM1AQ9BSK4 669 aa14.47□□□□□ -0.09
RET-201ENST00000340058 INTS10Q9NVR2 710 aaKnown RBP14.47□□□□□ -0.09
RET-201ENST00000340058 RPL26L1Q9UNX3 145 aaKnown RBP14.47□□□□□ -0.09
RET-201ENST00000340058 COQ6Q9Y2Z9 468 aa14.47□□□□□ -0.09
RET-201ENST00000340058 KNTC1P50748 2209 aa14.47□□□□□ -0.09
RET-201ENST00000340058 PNMA8CA0A1B0GUJ8 204 aa14.47□□□□□ -0.09
RET-201ENST00000340058 LOC730098B7Z3J9 87 aa14.47□□□□□ -0.09
RET-201ENST00000340058 HAS3O00219 553 aa14.47□□□□□ -0.09
RET-201ENST00000340058 TGFB1P01137 390 aa14.47□□□□□ -0.09
RET-201ENST00000340058 POU2F1P14859 743 aa14.47□□□□□ -0.09
RET-201ENST00000340058 MTHFRP42898 656 aa14.47□□□□□ -0.09
RET-201ENST00000340058 MAGEA11P43364 429 aa14.47□□□□□ -0.09
RET-201ENST00000340058 DGKEP52429 567 aa14.47□□□□□ -0.09
RET-201ENST00000340058 BNIP2Q12982 314 aa14.47□□□□□ -0.09
RET-201ENST00000340058 SLC5A9Q2M3M2 681 aa14.47□□□□□ -0.09
RET-201ENST00000340058 ATAD3BQ5T9A4 648 aa14.47□□□□□ -0.09
RET-201ENST00000340058 CYP4Z1Q86W10 505 aa14.47□□□□□ -0.09
RET-201ENST00000340058 APCDD1Q8J025 514 aa14.47□□□□□ -0.09
RET-201ENST00000340058 C2CD4AQ8NCU7 369 aaPredicted RBP14.47□□□□□ -0.09
RET-201ENST00000340058 PSKH2Q96QS6 385 aa14.47□□□□□ -0.09
RET-201ENST00000340058 TFB2MQ9H5Q4 396 aaKnown RBP14.47□□□□□ -0.09
RET-201ENST00000340058 FBXL21Q9UKT6 434 aa14.47□□□□□ -0.09
RET-201ENST00000340058 LYVE1Q9Y5Y7 322 aa14.47□□□□□ -0.09
RET-201ENST00000340058 DGKBQ9Y6T7 804 aa14.47□□□□□ -0.09
RET-201ENST00000340058 WFS1O76024 890 aa14.47□□□□□ -0.09
RET-201ENST00000340058 NFATC1O95644 943 aa14.47□□□□□ -0.09
RET-201ENST00000340058 AMD1P17707 334 aa14.47□□□□□ -0.09
RET-201ENST00000340058 ATAT1Q5SQI0 421 aa14.47□□□□□ -0.09
RET-201ENST00000340058 FAM46CQ5VWP2 391 aa14.47□□□□□ -0.09
RET-201ENST00000340058 GDPD4Q6W3E5 623 aa14.47□□□□□ -0.09
RET-201ENST00000340058 SPATA19Q7Z5L4 167 aa14.47□□□□□ -0.09
RET-201ENST00000340058 PHYKPLQ8IUZ5 450 aa14.47□□□□□ -0.09
RET-201ENST00000340058 OR4F6Q8NGB9 312 aa14.47□□□□□ -0.09
RET-201ENST00000340058 OR4A15Q8NGL6 344 aa14.47□□□□□ -0.09
RET-201ENST00000340058 ANKRD49Q8WVL7 239 aa14.47□□□□□ -0.09
RET-201ENST00000340058 SLC7A6OSQ96CW6 309 aaPredicted RBP14.47□□□□□ -0.09
RET-201ENST00000340058 SPACA7Q96KW9 195 aa14.47□□□□□ -0.09
RET-201ENST00000340058 C6orf62Q9GZU0 229 aaPredicted RBP14.47□□□□□ -0.09
RET-201ENST00000340058 C11orf49Q9H6J7 331 aa14.47□□□□□ -0.09
RET-201ENST00000340058 AMBNQ9NP70 447 aa14.47□□□□□ -0.09
RET-201ENST00000340058 ATAD3AQ9NVI7 634 aa14.47□□□□□ -0.09
RET-201ENST00000340058 NDRG2Q9UN36 371 aaKnown RBP14.47□□□□□ -0.09
RET-201ENST00000340058 INSL6Q9Y581 213 aa14.47□□□□□ -0.09
RET-201ENST00000340058 NUP205Q92621 2012 aa14.47□□□□□ -0.09
RET-201ENST00000340058 LEFTY2O00292 366 aa14.47□□□□□ -0.09
RET-201ENST00000340058 MMP20O60882 483 aa14.47□□□□□ -0.09
RET-201ENST00000340058 PPIGQ13427 754 aaKnown RBP eCLIP14.47□□□□□ -0.09
RET-201ENST00000340058 GPAT3Q53EU6 434 aa14.47□□□□□ -0.09
RET-201ENST00000340058 EPGNQ6UW88 154 aa14.47□□□□□ -0.09
RET-201ENST00000340058 DEF8Q6ZN54 512 aa14.47□□□□□ -0.09
RET-201ENST00000340058 TIFABQ6ZNK6 161 aa14.47□□□□□ -0.09
RET-201ENST00000340058 MIPEPQ99797 713 aa14.47□□□□□ -0.09
RET-201ENST00000340058 KLHL28Q9NXS3 571 aa14.47□□□□□ -0.09
RET-201ENST00000340058 GJD2Q9UKL4 321 aa14.47□□□□□ -0.09
RET-201ENST00000340058 K7EPI3 171 aa14.46□□□□□ -0.09
RET-201ENST00000340058 KLF11O14901 512 aa14.46□□□□□ -0.09
RET-201ENST00000340058 KDELR3O43731 214 aa14.46□□□□□ -0.09
RET-201ENST00000340058 OAZ2O95190 189 aa14.46□□□□□ -0.09
RET-201ENST00000340058 PRNPP04156 253 aa14.46□□□□□ -0.09
RET-201ENST00000340058 OCM2P0CE71 109 aa14.46□□□□□ -0.09
RET-201ENST00000340058 OCMP0CE72 109 aaPredicted RBP14.46□□□□□ -0.09
RET-201ENST00000340058 MADCAM1Q13477 382 aa14.46□□□□□ -0.09
RET-201ENST00000340058 TRIM16LQ309B1 348 aa14.46□□□□□ -0.09
RET-201ENST00000340058 PTCHD3Q3KNS1 767 aa14.46□□□□□ -0.09
RET-201ENST00000340058 VITQ6UXI7 678 aa14.46□□□□□ -0.09
RET-201ENST00000340058 KLHDC9Q8NEP7 349 aa14.46□□□□□ -0.09
RET-201ENST00000340058 OGDHLQ9ULD0 1010 aa14.46□□□□□ -0.09
RET-201ENST00000340058 ABHD14A-ACY1A0A1B0GW23 586 aa14.46□□□□□ -0.09
RET-201ENST00000340058 FPGTO14772 594 aa14.46□□□□□ -0.09
RET-201ENST00000340058 EFCAB14O75071 495 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms