RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 URODP06132 367 aa18.52■□□□□ 0.55
PSPC1-201ENST00000338910 UGT2B4P06133 528 aa18.52■□□□□ 0.55
PSPC1-201ENST00000338910 CRHBPP24387 322 aa18.52■□□□□ 0.55
PSPC1-201ENST00000338910 ZNF177Q13360 481 aaPredicted RBP18.52■□□□□ 0.55
PSPC1-201ENST00000338910 PERM1Q5SV97 790 aa18.52■□□□□ 0.55
PSPC1-201ENST00000338910 PHYKPLQ8IUZ5 450 aa18.52■□□□□ 0.55
PSPC1-201ENST00000338910 PARP8Q8N3A8 854 aa18.52■□□□□ 0.55
PSPC1-201ENST00000338910 TTC30BQ8N4P2 665 aa18.52■□□□□ 0.55
PSPC1-201ENST00000338910 MINDY2Q8NBR6 621 aa18.52■□□□□ 0.55
PSPC1-201ENST00000338910 NSMCE3Q96MG7 304 aa18.52■□□□□ 0.55
PSPC1-201ENST00000338910 ALG2Q9H553 416 aa18.52■□□□□ 0.55
PSPC1-201ENST00000338910 HMG20AQ9NP66 347 aa18.52■□□□□ 0.55
PSPC1-201ENST00000338910 UBA2Q9UBT2 640 aaPredicted RBP18.52■□□□□ 0.55
PSPC1-201ENST00000338910 GIMAP2Q9UG22 337 aa18.52■□□□□ 0.55
PSPC1-201ENST00000338910 CRYL1Q9Y2S2 319 aa18.52■□□□□ 0.55
PSPC1-201ENST00000338910 DNAJC15Q9Y5T4 150 aa18.52■□□□□ 0.55
PSPC1-201ENST00000338910 DGKBQ9Y6T7 804 aa18.52■□□□□ 0.55
PSPC1-201ENST00000338910 CLDN11O75508 207 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 RSL1D1O76021 490 aaKnown RBP18.51■□□□□ 0.55
PSPC1-201ENST00000338910 SUPT7LO94864 414 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 MATN4O95460 622 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 NCK1P16333 377 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 LAG3P18627 525 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 EEF1DP29692 281 aaKnown RBP18.51■□□□□ 0.55
PSPC1-201ENST00000338910 TWF1Q12792 350 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 COQ5Q5HYK3 327 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 ADGRF1Q5T601 910 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 AGAP7PQ5VUJ5 663 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 SLC16A12Q6ZSM3 486 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 IFNEQ86WN2 208 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 SPARTQ8N0X7 666 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 OSCP1Q8WVF1 389 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 SGCDQ92629 289 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 PLD4Q96BZ4 506 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 ARMC5Q96C12 935 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 ZNF599Q96NL3 588 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 CINPQ9BW66 212 aaPredicted RBP18.51■□□□□ 0.55
PSPC1-201ENST00000338910 FUNDC2Q9BWH2 189 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 TRIM54Q9BYV2 358 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 ING2Q9H160 280 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 PCDHGA11Q9Y5H2 935 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 RHOCP08134 193 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 OCA2Q04671 838 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 ACAP2Q15057 778 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 ZIK1Q3SY52 487 aaPredicted RBP18.51■□□□□ 0.55
PSPC1-201ENST00000338910 RABL3Q5HYI8 236 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 ZNF678Q5SXM1 525 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 PIWIL3Q7Z3Z3 882 aaKnown RBP18.51■□□□□ 0.55
PSPC1-201ENST00000338910 DNAJB7Q7Z6W7 309 aaPredicted RBP18.51■□□□□ 0.55
PSPC1-201ENST00000338910 DDX53Q86TM3 631 aaKnown RBP18.51■□□□□ 0.55
PSPC1-201ENST00000338910 ITIH5Q86UX2 942 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 CLYBLQ8N0X4 340 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 OR13C4Q8NGS5 318 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 GABPB2Q8TAK5 448 aaPredicted RBP18.51■□□□□ 0.55
PSPC1-201ENST00000338910 EFHD2Q96C19 240 aaPredicted RBP18.51■□□□□ 0.55
PSPC1-201ENST00000338910 L3HYPDHQ96EM0 354 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 UBXN10Q96LJ8 280 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 HERC2P3Q9BVR0 1158 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 WDR12Q9GZL7 423 aaKnown RBP18.51■□□□□ 0.55
PSPC1-201ENST00000338910 MFSD1Q9H3U5 465 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 MAGEE1Q9HCI5 957 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 SDR39U1Q9NRG7 319 aaPredicted RBP18.51■□□□□ 0.55
PSPC1-201ENST00000338910 SACM1LQ9NTJ5 587 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 PTGDR2Q9Y5Y4 395 aa18.51■□□□□ 0.55
PSPC1-201ENST00000338910 KDELR3O43731 214 aa18.5■□□□□ 0.55
PSPC1-201ENST00000338910 S1PR4O95977 384 aa18.5■□□□□ 0.55
PSPC1-201ENST00000338910 FGF1P05230 155 aa18.5■□□□□ 0.55
PSPC1-201ENST00000338910 ALOX5P09917 674 aa18.5■□□□□ 0.55
PSPC1-201ENST00000338910 HLA-DPA1P20036 260 aa18.5■□□□□ 0.55
PSPC1-201ENST00000338910 RAD23AP54725 363 aa18.5■□□□□ 0.55
PSPC1-201ENST00000338910 IFITM3Q01628 133 aa18.5■□□□□ 0.55
PSPC1-201ENST00000338910 RAB33AQ14088 237 aa18.5■□□□□ 0.55
PSPC1-201ENST00000338910 GRB7Q14451 532 aa18.5■□□□□ 0.55
PSPC1-201ENST00000338910 SKIV2LQ15477 1246 aaKnown RBP18.5■□□□□ 0.55
PSPC1-201ENST00000338910 KCNJ8Q15842 424 aa18.5■□□□□ 0.55
PSPC1-201ENST00000338910 PHKG1Q16816 387 aa18.5■□□□□ 0.55
PSPC1-201ENST00000338910 RBM48Q5RL73 367 aaKnown RBP18.5■□□□□ 0.55
PSPC1-201ENST00000338910 OTUD3Q5T2D3 398 aaPredicted RBP18.5■□□□□ 0.55
PSPC1-201ENST00000338910 CRTC3Q6UUV7 619 aa18.5■□□□□ 0.55
PSPC1-201ENST00000338910 R3HCC1LQ7Z5L2 792 aaKnown RBP18.5■□□□□ 0.55
PSPC1-201ENST00000338910 ANKRD49Q8WVL7 239 aa18.5■□□□□ 0.55
PSPC1-201ENST00000338910 SCHIP1Q9P0W5 487 aaPredicted RBP18.5■□□□□ 0.55
PSPC1-201ENST00000338910 OAS3Q9Y6K5 1087 aaKnown RBP18.5■□□□□ 0.55
PSPC1-201ENST00000338910 EPOP01588 193 aa18.5■□□□□ 0.55
PSPC1-201ENST00000338910 TGM1P22735 817 aa18.5■□□□□ 0.55
PSPC1-201ENST00000338910 ARSFP54793 590 aa18.5■□□□□ 0.55
PSPC1-201ENST00000338910 VEPH1Q14D04 833 aa18.5■□□□□ 0.55
PSPC1-201ENST00000338910 UNC50Q53HI1 259 aa18.5■□□□□ 0.55
PSPC1-201ENST00000338910 HECTD2Q5U5R9 776 aa18.5■□□□□ 0.55
PSPC1-201ENST00000338910 TMEM199Q8N511 208 aa18.5■□□□□ 0.55
PSPC1-201ENST00000338910 SLC22A17Q8WUG5 538 aa18.5■□□□□ 0.55
PSPC1-201ENST00000338910 HPS1Q92902 700 aa18.5■□□□□ 0.55
PSPC1-201ENST00000338910 PSKH2Q96QS6 385 aa18.5■□□□□ 0.55
PSPC1-201ENST00000338910 SLC22A12Q96S37 553 aa18.5■□□□□ 0.55
PSPC1-201ENST00000338910 KCTD14Q9BQ13 255 aaPredicted RBP18.5■□□□□ 0.55
PSPC1-201ENST00000338910 MGME1Q9BQP7 344 aa18.5■□□□□ 0.55
PSPC1-201ENST00000338910 BDH2Q9BUT1 245 aa18.5■□□□□ 0.55
PSPC1-201ENST00000338910 CHID1Q9BWS9 393 aa18.5■□□□□ 0.55
PSPC1-201ENST00000338910 KLF16Q9BXK1 252 aaPredicted RBP18.5■□□□□ 0.55
PSPC1-201ENST00000338910 KIAA0355O15063 1070 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms