RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 NUP210LQ5VU65 1888 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 PIKFYVEQ9Y2I7 2098 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 GLYATL1P3A0A0U1RQE8 302 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 LRRD1A4D1F6 860 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 GPR39O43194 453 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 KRT86O43790 486 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 UGT1A9O60656 530 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 CBX6O95503 412 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 UGT1A6P19224 532 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 UGT1A1P22309 533 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 UGT1A4P22310 534 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 PRKAA1Q13131 559 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 ITGA9Q13797 1035 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 NOMO1Q15155 1222 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 TEX44Q53QW1 395 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 VWA5B1Q5TIE3 1220 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 FBXO38Q6PIJ6 1188 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 NPNTQ6UXI9 565 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 VSIG1Q86XK7 387 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 RAB43Q86YS6 212 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 TICAM1Q8IUC6 712 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 SNRNP40Q96DI7 357 aaKnown RBP11.19□□□□□ -0.62
CSMD2-202ENST00000338325 C19orf60Q96EN9 201 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 C5orf34Q96MH7 638 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 PPM1MQ96MI6 270 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 ACTR5Q9H9F9 607 aaPredicted RBP11.19□□□□□ -0.62
CSMD2-202ENST00000338325 UGT1A7Q9HAW7 530 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 UGT1A10Q9HAW8 530 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 UGT1A8Q9HAW9 530 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 SYTL2Q9HCH5 934 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 PCMTD2Q9NV79 361 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 SMOXQ9NWM0 555 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 UBP1Q9NZI7 540 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 IL17CQ9P0M4 197 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 C5AR2Q9P296 337 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 POMT2Q9UKY4 750 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 NENFQ9UMX5 172 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 SLC5A6Q9Y289 635 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 LRBAP50851 2863 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 FER1L5A0AVI2 2057 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 PCM1Q15154 2024 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 CCDC88CQ9P219 2028 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 MGAT4DA6NG13 374 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 SLC9B1P1A6NJY1 282 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 TMEM150CB9EJG8 249 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 MATN2O00339 956 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 DDX3YO15523 660 aaKnown RBP11.18□□□□□ -0.62
CSMD2-202ENST00000338325 LCA5LO95447 670 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 SERPINC1P01008 464 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 H2AFZP0C0S5 128 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 SLC35G4P0C7Q5 338 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 MSL3P1P0C860 447 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 ZFXP17010 805 aaPredicted RBP11.18□□□□□ -0.62
CSMD2-202ENST00000338325 POLR2CP19387 275 aaPredicted RBP11.18□□□□□ -0.62
CSMD2-202ENST00000338325 HLA-DPA1P20036 260 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 MSH3P20585 1137 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 CYP2A7P20853 494 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 CDH3P22223 829 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 PTPN3P26045 913 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 NDUFS1P28331 727 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 AKT1P31749 480 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 CA5AP35218 305 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 TNNT3P45378 269 aaPredicted RBP11.18□□□□□ -0.62
CSMD2-202ENST00000338325 ADCY2Q08462 1091 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 RAPSNQ13702 412 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 NCF4Q15080 339 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 LONRF2Q1L5Z9 754 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 ZRANB3Q5FWF4 1079 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 ZNF789Q5FWF6 425 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 SIRPB2Q5JXA9 342 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 FNBP1LQ5T0N5 605 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 H2AFVQ71UI9 128 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 B4GALNT4Q76KP1 1039 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 GLT6D1Q7Z4J2 308 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 BEND7Q8N7W2 519 aaPredicted RBP11.18□□□□□ -0.62
CSMD2-202ENST00000338325 OR2L2Q8NH16 312 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 OR1L3Q8NH93 324 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 CTNNBL1Q8WYA6 563 aaPredicted RBP11.18□□□□□ -0.62
CSMD2-202ENST00000338325 TEKT5Q96M29 485 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 MAK16Q9BXY0 300 aaKnown RBP11.18□□□□□ -0.62
CSMD2-202ENST00000338325 C1GALT1Q9NS00 363 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 ASF1BQ9NVP2 202 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 HACD3Q9P035 362 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 FAM153AQ9UHL3 310 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 ACSL5Q9ULC5 683 aa11.18□□□□□ -0.62
CSMD2-202ENST00000338325 LOC285095A0A1B0GVY8 99 aa11.17□□□□□ -0.62
CSMD2-202ENST00000338325 KLHL33A6NCF5 533 aa11.17□□□□□ -0.62
CSMD2-202ENST00000338325 C3orf70A6NLC5 250 aaPredicted RBP11.17□□□□□ -0.62
CSMD2-202ENST00000338325 C9J4A7 227 aa11.17□□□□□ -0.62
CSMD2-202ENST00000338325 GAPDHSO14556 408 aaPredicted RBP11.17□□□□□ -0.62
CSMD2-202ENST00000338325 WNT3AP56704 352 aa11.17□□□□□ -0.62
CSMD2-202ENST00000338325 ZBED6P86452 979 aa11.17□□□□□ -0.62
CSMD2-202ENST00000338325 KYNUQ16719 465 aa11.17□□□□□ -0.62
CSMD2-202ENST00000338325 PTCHD3Q3KNS1 767 aa11.17□□□□□ -0.62
CSMD2-202ENST00000338325 PLEKHN1Q494U1 663 aaPredicted RBP11.17□□□□□ -0.62
CSMD2-202ENST00000338325 KDELC1Q6UW63 502 aa11.17□□□□□ -0.62
CSMD2-202ENST00000338325 DET1Q7L5Y6 550 aa11.17□□□□□ -0.62
CSMD2-202ENST00000338325 RFX6Q8HWS3 928 aa11.17□□□□□ -0.62
CSMD2-202ENST00000338325 CISD2Q8N5K1 135 aaKnown RBP11.17□□□□□ -0.62
CSMD2-202ENST00000338325 SLC25A41Q8N5S1 370 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms