RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 SMIM35A0A1B0GVV1 85 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 SOWAHBA6NEL2 793 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 SOBPA7XYQ1 873 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 PLD2O14939 933 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 TREHO43280 583 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 PLOD3O60568 738 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 TALDO1P37837 337 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 LILRA4P59901 499 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 NCS1P62166 190 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 PPP2R2BQ00005 443 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 CAMK2BQ13554 666 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 ANGPT1Q15389 498 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 NPTX1Q15818 432 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 PYDC2Q56P42 97 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 HMBOX1Q6NT76 420 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 GALNT7Q86SF2 657 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 TMPRSS4Q9NRS4 437 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 THG1LQ9NWX6 298 aaKnown RBP15.87■□□□□ 0.13
NPHP3-201ENST00000337331 ENOPH1Q9UHY7 261 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 NT5C1B-RDH14C9J2C7 533 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 XPNPEP2O43895 674 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 IL32P24001 234 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 MC4RP32245 332 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 CLEC6AQ6EIG7 209 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 ZNF549Q6P9A3 640 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 DPY19L3Q6ZPD9 716 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 CMASQ8NFW8 434 aaPredicted RBP15.87■□□□□ 0.13
NPHP3-201ENST00000337331 ADAMTS16Q8TE57 1224 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 SNAPC3Q92966 411 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 NARS2Q96I59 477 aaKnown RBP15.87■□□□□ 0.13
NPHP3-201ENST00000337331 RANBP9Q96S59 729 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 TRIM8Q9BZR9 551 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 ADAMTS10Q9H324 1103 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 ALG2Q9H553 416 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 SYNDIG1Q9H7V2 258 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 AMBNQ9NP70 447 aa15.87■□□□□ 0.13
NPHP3-201ENST00000337331 A0A1W2PQ67 120 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 BCKDKO14874 412 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 DHX15O43143 795 aaKnown RBP15.86■□□□□ 0.13
NPHP3-201ENST00000337331 INMTO95050 263 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 CCNYL3P0C7X3 344 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 SRP54P61011 504 aaKnown RBP15.86■□□□□ 0.13
NPHP3-201ENST00000337331 SELENBP1Q13228 472 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 FAM209AQ5JX71 171 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 MTSS1LQ765P7 747 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 TAS2R9Q9NYW1 312 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 TBC1D30Q9Y2I9 924 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 MICAL3Q7RTP6 2002 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 PRORSD1PA6NEY8 169 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 AQP12BA6NM10 295 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 LRATO95237 230 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 CSF2P04141 144 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 TSPAN19P0C672 248 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 LMO2P25791 158 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 FPGSQ05932 587 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 SETMARQ53H47 684 aaPredicted RBP15.86■□□□□ 0.13
NPHP3-201ENST00000337331 RBM48Q5RL73 367 aaKnown RBP15.86■□□□□ 0.13
NPHP3-201ENST00000337331 BPHLQ86WA6 291 aaPredicted RBP15.86■□□□□ 0.13
NPHP3-201ENST00000337331 AQP12AQ8IXF9 295 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 OR6K2Q8NGY2 324 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 LMO3Q8TAP4 145 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 UROC1Q96N76 676 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 OR52E6Q96RD3 313 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 AGAP2Q99490 1192 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 HDHD2Q9H0R4 259 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 CNTN3Q9P232 1028 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 ING4Q9UNL4 249 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 PEX16Q9Y5Y5 336 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 ROBO1Q9Y6N7 1651 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 PDPK1O15530 556 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 IFNA16P05015 189 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 NMBRP28336 390 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 TAF10Q12962 218 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 DAG1Q14118 895 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 TCEAL1Q15170 157 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 FAM131AQ6UXB0 335 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 TMEM192Q8IY95 271 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 FSTL5Q8N475 847 aaPredicted RBP15.86■□□□□ 0.13
NPHP3-201ENST00000337331 AADATQ8N5Z0 425 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 TMCO6Q96DC7 493 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 C19orf60Q96EN9 201 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 PANX1Q96RD7 426 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 BBS4Q96RK4 519 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 HMGXB4Q9UGU5 601 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 SNX10Q9Y5X0 201 aa15.86■□□□□ 0.13
NPHP3-201ENST00000337331 FAM240BA0A1B0GVZ2 78 aa15.85■□□□□ 0.13
NPHP3-201ENST00000337331 TAS2R39P59534 338 aa15.85■□□□□ 0.13
NPHP3-201ENST00000337331 TXNDC11Q6PKC3 985 aa15.85■□□□□ 0.13
NPHP3-201ENST00000337331 DOK6Q6PKX4 331 aa15.85■□□□□ 0.13
NPHP3-201ENST00000337331 SNED1Q8TER0 1413 aa15.85■□□□□ 0.13
NPHP3-201ENST00000337331 AKAP1Q92667 903 aaKnown RBP eCLIP15.85■□□□□ 0.13
NPHP3-201ENST00000337331 CENPIQ92674 756 aaPredicted RBP15.85■□□□□ 0.13
NPHP3-201ENST00000337331 FBXL18Q96ME1 805 aa15.85■□□□□ 0.13
NPHP3-201ENST00000337331 FERD3LQ96RJ6 166 aa15.85■□□□□ 0.13
NPHP3-201ENST00000337331 FZD8Q9H461 694 aa15.85■□□□□ 0.13
NPHP3-201ENST00000337331 ATP13A3Q9H7F0 1226 aa15.85■□□□□ 0.13
NPHP3-201ENST00000337331 PRRC2BQ5JSZ5 2229 aaKnown RBP15.85■□□□□ 0.13
NPHP3-201ENST00000337331 MYBPHLA2RUH7 354 aa15.85■□□□□ 0.13
NPHP3-201ENST00000337331 MSCO60682 206 aa15.85■□□□□ 0.13
NPHP3-201ENST00000337331 TBL1XO60907 577 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms