RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 MARCH4Q9P2E8 410 aaPredicted RBP6.4□□□□□ -1.39
HMG20A-201ENST00000336216 ASF1AQ9Y294 204 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 ZNF510Q9Y2H8 683 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 MTF2Q9Y483 593 aaPredicted RBP6.4□□□□□ -1.39
HMG20A-201ENST00000336216 DOCK1Q14185 1865 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 FUOMA2VDF0 154 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.39□□□□□ -1.39
HMG20A-201ENST00000336216 SYN3O14994 580 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 SERPINI2O75830 405 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 SNAP29O95721 258 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 EIF2S1P05198 315 aaKnown RBP6.39□□□□□ -1.39
HMG20A-201ENST00000336216 COX7A2P14406 83 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 IL7RP16871 459 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 CYP2A7P20853 494 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 SLC7A1P30825 629 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 GJA8P48165 433 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 RPIAP49247 311 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 STK19P49842 368 aaPredicted RBP6.39□□□□□ -1.39
HMG20A-201ENST00000336216 BCAP31P51572 246 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 NEK2P51955 445 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 NKX2-5P52952 324 aaPredicted RBP6.39□□□□□ -1.39
HMG20A-201ENST00000336216 NAE1Q13564 534 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 GRM2Q14416 872 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 PAFAH1B3Q15102 231 aaKnown RBP6.39□□□□□ -1.39
HMG20A-201ENST00000336216 RABL3Q5HYI8 236 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 SDE2Q6IQ49 451 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.39□□□□□ -1.394e-6■■■■□ 20.5
HMG20A-201ENST00000336216 UBE2R2Q712K3 238 aaPredicted RBP6.39□□□□□ -1.39
HMG20A-201ENST00000336216 CEP97Q8IW35 865 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 KREMEN2Q8NCW0 462 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 FAM110BQ8TC76 370 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 CEP19Q96LK0 163 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 TMEM74Q96NL1 305 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 NSUN5Q96P11 429 aaKnown RBP6.39□□□□□ -1.39
HMG20A-201ENST00000336216 OR52E6Q96RD3 313 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 BDH2Q9BUT1 245 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 IMPAD1Q9NX62 359 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 CACNA2D2Q9NY47 1150 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 IFT80Q9P2H3 777 aaPredicted RBP6.39□□□□□ -1.39
HMG20A-201ENST00000336216 YIPF1Q9Y548 306 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.39□□□□□ -1.39
HMG20A-201ENST00000336216 NUP214P35658 2090 aaPredicted RBP6.39□□□□□ -1.39
HMG20A-201ENST00000336216 BRCA1P38398 1863 aaKnown RBP6.39□□□□□ -1.39
HMG20A-201ENST00000336216 A0A0G2JN53 185 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 G3V2L1 256 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 CNOT3O75175 753 aaKnown RBP6.39□□□□□ -1.39
HMG20A-201ENST00000336216 XYLBO75191 536 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 ELFN1P0C7U0 828 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 CRATP43155 626 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 RPS9P46781 194 aaKnown RBP6.39□□□□□ -1.39
HMG20A-201ENST00000336216 IDH2P48735 452 aaKnown RBP6.39□□□□□ -1.39
HMG20A-201ENST00000336216 AGTR2P50052 363 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 DGKQP52824 942 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 IL10RBQ08334 325 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 SGCGQ13326 291 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 PIK3R6Q5UE93 754 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 BROXQ5VW32 411 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 RSBN1Q5VWQ0 802 aaPredicted RBP6.39□□□□□ -1.39
HMG20A-201ENST00000336216 ATG14Q6ZNE5 492 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 TIFABQ6ZNK6 161 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 PAQR9Q6ZVX9 377 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 ZNF534Q76KX8 674 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 GET4Q7L5D6 327 aaPredicted RBP6.39□□□□□ -1.39
HMG20A-201ENST00000336216 PIWIL3Q7Z3Z3 882 aaKnown RBP6.39□□□□□ -1.39
HMG20A-201ENST00000336216 TRIM48Q8IWZ4 208 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 SLC15A4Q8N697 577 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 PSD4Q8NDX1 1056 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 OR7A2PQ8NGA2 310 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 SH3RF2Q8TEC5 729 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 STYXQ8WUJ0 223 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 EEF1AKMT1Q8WVE0 214 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 RELTQ969Z4 430 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 EBPLQ9BY08 206 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 MAGEH1Q9H213 219 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 RIBC2Q9H4K1 309 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 MTMR10Q9NXD2 777 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 DYRK1BQ9Y463 629 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 CFAP20Q9Y6A4 193 aaKnown RBP6.39□□□□□ -1.39
HMG20A-201ENST00000336216 WNT6Q9Y6F9 365 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 A8MT66 165 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 SAP18O00422 153 aaKnown RBP6.39□□□□□ -1.39
HMG20A-201ENST00000336216 IFRD1O00458 451 aaPredicted RBP6.39□□□□□ -1.39
HMG20A-201ENST00000336216 GRID2O43424 1007 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 RGS14O43566 566 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 SLC22A3O75751 556 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 STATHP02808 62 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 CATP04040 527 aaKnown RBP6.39□□□□□ -1.39
HMG20A-201ENST00000336216 SERPINB10P48595 397 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 BMXP51813 675 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 MSANTD2Q6P1R3 559 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 CCDC149Q6ZUS6 474 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 TAS1R1Q7RTX1 841 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 GALNT5Q7Z7M9 940 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 ZDHHC13Q8IUH4 622 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 RAVER1Q8IY67 606 aaKnown RBP6.39□□□□□ -1.39
HMG20A-201ENST00000336216 C12orf76Q8N812 135 aaPredicted RBP6.39□□□□□ -1.39
HMG20A-201ENST00000336216 POC5Q8NA72 575 aa6.39□□□□□ -1.39
HMG20A-201ENST00000336216 TXNDC5Q8NBS9 432 aaKnown RBP6.39□□□□□ -1.39
HMG20A-201ENST00000336216 SMG7Q92540 1137 aaKnown RBP6.39□□□□□ -1.39
HMG20A-201ENST00000336216 FUBP3Q96I24 572 aaKnown RBP eCLIP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms